Go to:
Gentoo Home
Documentation
Forums
Lists
Bugs
Planet
Store
Wiki
Get Gentoo!
Gentoo's Bugzilla – Attachment 579304 Details for
Bug 687700
sci-biology/gatk-2.4 : [get] Error getting http://repo1.maven.org/maven2/org/apache/ivy/ivy/2.2.0/ivy-2.2.0.jar to /var/tmp/portage/sci-biology/gatk-2.4/work/.ant/lib/ivy-2.2.0.jar
Home
|
New
–
[Ex]
|
Browse
|
Search
|
Privacy Policy
|
[?]
|
Reports
|
Requests
|
Help
|
New Account
|
Log In
[x]
|
Forgot Password
Login:
[x]
sci-biology:gatk-2.4:20190608-222622.log
sci-biology:gatk-2.4:20190608-222622.log (text/plain), 4.63 KB, created by
Toralf Förster
on 2019-06-09 07:02:18 UTC
(
hide
)
Description:
sci-biology:gatk-2.4:20190608-222622.log
Filename:
MIME Type:
Creator:
Toralf Förster
Created:
2019-06-09 07:02:18 UTC
Size:
4.63 KB
patch
obsolete
> * Package: sci-biology/gatk-2.4 > * Repository: gentoo > * Maintainer: sci-biology@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > * Using: icedtea-bin-8 >>>> Unpacking source... >>>> Source unpacked in /var/tmp/portage/sci-biology/gatk-2.4/work >>>> Preparing source in /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4 ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4 ... >Rewriting attributes >Rewriting ./build.xml >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4 ... > * Disabling all optional ANT_TASKS >Buildfile: /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4/build.xml > [taskdef] Could not load definitions from resource cloverlib.xml. It could not be found. > >git.describe: > [exec] Result: 128 > >tagged.build.version: > >git.rev-parse: > [exec] Result: 128 > >untagged.build.version: > >generate.build.version: > >init: > [echo] BUILD PROPERTIES > [echo] Include Scala? : yes > [echo] Include Private? : no > [echo] Include Protected? : no > [echo] Include External? : no > [echo] Include Contracts? : no > [echo] Source revision : exported > [echo] Build time : 2019/06/09 00:26:29 > [mkdir] Created dir: /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4/build > [mkdir] Created dir: /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4/lib > [mkdir] Created dir: /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4/build/java/classes > [mkdir] Created dir: /var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4/build/java/contracts > >init.resolve: > [mkdir] Created dir: /var/tmp/portage/sci-biology/gatk-2.4/work/.ant/lib > [get] Getting: http://repo1.maven.org/maven2/org/apache/ivy/ivy/2.2.0/ivy-2.2.0.jar > [get] To: /var/tmp/portage/sci-biology/gatk-2.4/work/.ant/lib/ivy-2.2.0.jar > [get] Error getting http://repo1.maven.org/maven2/org/apache/ivy/ivy/2.2.0/ivy-2.2.0.jar to /var/tmp/portage/sci-biology/gatk-2.4/work/.ant/lib/ivy-2.2.0.jar > >BUILD FAILED >/var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4/build.xml:249: java.net.UnknownHostException: repo1.maven.org > at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:184) > at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392) > at java.net.Socket.connect(Socket.java:589) > at java.net.Socket.connect(Socket.java:538) > at sun.net.NetworkClient.doConnect(NetworkClient.java:180) > at sun.net.www.http.HttpClient.openServer(HttpClient.java:463) > at sun.net.www.http.HttpClient.openServer(HttpClient.java:558) > at sun.net.www.http.HttpClient.<init>(HttpClient.java:242) > at sun.net.www.http.HttpClient.New(HttpClient.java:339) > at sun.net.www.http.HttpClient.New(HttpClient.java:357) > at sun.net.www.protocol.http.HttpURLConnection.getNewHttpClient(HttpURLConnection.java:1220) > at sun.net.www.protocol.http.HttpURLConnection.plainConnect0(HttpURLConnection.java:1156) > at sun.net.www.protocol.http.HttpURLConnection.plainConnect(HttpURLConnection.java:1050) > at sun.net.www.protocol.http.HttpURLConnection.connect(HttpURLConnection.java:984) > at org.apache.tools.ant.taskdefs.Get$GetThread.openConnection(Get.java:766) > at org.apache.tools.ant.taskdefs.Get$GetThread.get(Get.java:676) > at org.apache.tools.ant.taskdefs.Get$GetThread.run(Get.java:666) > >Total time: 0 seconds > * ERROR: sci-biology/gatk-2.4::gentoo failed (compile phase): > * eant failed > * > * Call stack: > * ebuild.sh, line 124: Called src_compile > * environment, line 3939: Called java-pkg-2_src_compile > * environment, line 1808: Called eant 'dist' '-f' 'build.xml' > * environment, line 636: Called die > * The specific snippet of code: > * ant ${antflags} "${@}" || die "eant failed" > * > * If you need support, post the output of `emerge --info '=sci-biology/gatk-2.4::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-biology/gatk-2.4::gentoo'`. >!!! When you file a bug report, please include the following information: >GENTOO_VM=icedtea-bin-8 CLASSPATH="" JAVA_HOME="/opt/icedtea-bin-3.12.0" >JAVACFLAGS="-source 1.6 -target 1.6" COMPILER="javac" >and of course, the output of emerge --info =gatk-2.4 > * The complete build log is located at '/var/log/portage/sci-biology:gatk-2.4:20190608-222622.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/gatk-2.4/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-biology/gatk-2.4/temp/environment'. > * Working directory: '/var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4' > * S: '/var/tmp/portage/sci-biology/gatk-2.4/work/gatk-2.4'
You cannot view the attachment while viewing its details because your browser does not support IFRAMEs.
View the attachment on a separate page
.
View Attachment As Raw
Actions:
View
Attachments on
bug 687700
:
579296
|
579298
|
579300
|
579302
| 579304 |
579306