* Package: dev-lang/R-3.5.3 * Repository: gentoo * Maintainer: sci-mathematics@gentoo.org * USE: X abi_x86_64 amd64 cairo elibc_glibc jpeg kernel_linux nls openmp png readline tiff userland_GNU * FEATURES: network-sandbox preserve-libs sandbox test userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran * x86_64-pc-linux-gnu-gfortran has OPENMP support >>> Unpacking source... >>> Unpacking R-3.5.3.tar.gz to /var/tmp/portage/dev-lang/R-3.5.3/work >>> Unpacking R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion to /var/tmp/portage/dev-lang/R-3.5.3/work unpack R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion: file format not recognized. Ignoring. >>> Source unpacked in /var/tmp/portage/dev-lang/R-3.5.3/work >>> Preparing source in /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3 ... * Applying R-3.4.1-parallel.patch ... [ ok ] * Applying R-3.4.1-rmath-shared.patch ... [ ok ] * Running eautoreconf in '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3' ... * Running autopoint --force ... [ ok ] * Running libtoolize --install --copy --force ... [ ok ] * Running aclocal -I m4 ... [ ok ] * Running autoconf -I m4 --force ... [ ok ] * Running autoheader -I m4 ... [ ok ] * Running elibtoolize in: R-3.5.3/ * Applying ppc64le/2.4.4 patch ... * Running elibtoolize in: R-3.5.3/tools/ * Applying portage/1.2.0 patch ... * Applying sed/1.5.6 patch ... * Applying as-needed/2.4.3 patch ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3 ... * econf: updating R-3.5.3/tools/config.sub with /usr/share/gnuconfig/config.sub * econf: updating R-3.5.3/tools/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --docdir=/usr/share/doc/R-3.5.3 --htmldir=/usr/share/doc/R-3.5.3/html --with-sysroot=/ --libdir=/usr/lib64 --enable-byte-compiled-packages --enable-R-shlib --disable-R-framework --with-blas=-lblas --docdir=/usr/share/doc/R-3.5.3 rdocdir=/usr/share/doc/R-3.5.3 --disable-java --enable-nls --enable-openmp --disable-R-profiling --disable-memory-profiling --disable-static --disable-R-static-lib --with-cairo --without-ICU --with-jpeglib --without-lapack --with-recommended-packages --with-libpng --with-readline --with-libtiff --without-tcltk --without-tk-config --without-tcl-config --with-x checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/lib/portage/python3.6/ebuild-helpers/xattr/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for /usr/bin/less... /usr/bin/less checking for gtar... no checking for gnutar... no checking for tar... /bin/tar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... 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checking for iconv... yes checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes checking whether iconv accepts "CP1252"... yes checking for iconvlist... no checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking wctype.h usability... yes checking wctype.h presence... yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/f77_f2c config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing po-directories commands config.status: executing stamp-h commands R is now configured for x86_64-pc-linux-gnu Source directory: . Installation directory: /usr C compiler: x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native Fortran 77 compiler: x86_64-pc-linux-gnu-gfortran -O2 -pipe Default C++ compiler: x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native C++98 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++98 -O2 -pipe -march=native C++11 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++11 -O2 -pipe -march=native C++14 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++14 -O2 -pipe -march=native C++17 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++17 -O2 -pipe -march=native Fortran 90/95 compiler: x86_64-pc-linux-gnu-gfortran -O2 -pipe Obj-C compiler: x86_64-pc-linux-gnu-gcc Interfaces supported: X11 External libraries: readline, BLAS(generic), curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo Options enabled: shared R library Capabilities skipped: ICU Options not enabled: shared BLAS, R profiling, memory profiling Recommended packages: yes configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally >>> Source configured. >>> Compiling source in /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3 ... make -j1 AR=x86_64-pc-linux-gnu-ar make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/m4' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tools' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/html' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/html' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/manual' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/etc' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/etc' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/share' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/share' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/scripts' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/scripts' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/include' mkdir -p -- ../../include make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/include/R_ext' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/include' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra/tre' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra/tre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c making xmalloc.d from xmalloc.c make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra/tre' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra/tre' x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c regcomp.c -o regcomp.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c regerror.c -o regerror.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c regexec.c -o regexec.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-ast.c -o tre-ast.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-compile.c -o tre-compile.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-mem.c -o tre-mem.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-parse.c -o tre-parse.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c tre-stack.c -o tre-stack.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c xmalloc.c -o xmalloc.o x86_64-pc-linux-gnu-ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o x86_64-pc-linux-gnu-ranlib libtre.a make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra/tre' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra/tre' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/extra' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/appl' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c integrate.c -o integrate.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c interv.c -o interv.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c maxcol.c -o maxcol.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c optim.c -o optim.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pretty.c -o pretty.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c uncmin.c -o uncmin.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dchdc.f -o dchdc.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dpbfa.f -o dpbfa.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dpbsl.f -o dpbsl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dpoco.f -o dpoco.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dpodi.f -o dpodi.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dpofa.f -o dpofa.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dposl.f -o dposl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dqrdc.f -o dqrdc.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dqrdc2.f -o dqrdc2.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dqrls.f -o dqrls.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dqrsl.f -o dqrsl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dqrutl.f -o dqrutl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dsvdc.f -o dsvdc.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dtrco.f -o dtrco.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dtrsl.f -o dtrsl.o x86_64-pc-linux-gnu-ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o x86_64-pc-linux-gnu-ranlib libappl.a make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/appl' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/appl' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c mlutils.c -o mlutils.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c d1mach.c -o d1mach.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c i1mach.c -o i1mach.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c fmax2.c -o fmax2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c fmin2.c -o fmin2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c fprec.c -o fprec.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c fround.c -o fround.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c ftrunc.c -o ftrunc.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sign.c -o sign.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c fsign.c -o fsign.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c imax2.c -o imax2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c imin2.c -o imin2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c chebyshev.c -o chebyshev.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c log1p.c -o log1p.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c lgammacor.c -o lgammacor.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c gammalims.c -o gammalims.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c stirlerr.c -o stirlerr.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c bd0.c -o bd0.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c gamma.c -o gamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c lgamma.c -o lgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c gamma_cody.c -o gamma_cody.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c beta.c -o beta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c lbeta.c -o lbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c polygamma.c -o polygamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c cospi.c -o cospi.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c bessel_i.c -o bessel_i.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c bessel_j.c -o bessel_j.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c bessel_k.c -o bessel_k.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c bessel_y.c -o bessel_y.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c choose.c -o choose.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c snorm.c -o snorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sexp.c -o sexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dgamma.c -o dgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pgamma.c -o pgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qgamma.c -o qgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rgamma.c -o rgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dbeta.c -o dbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pbeta.c -o pbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qbeta.c -o qbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rbeta.c -o rbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dunif.c -o dunif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c punif.c -o punif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qunif.c -o qunif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c runif.c -o runif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dnorm.c -o dnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pnorm.c -o pnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qnorm.c -o qnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rnorm.c -o rnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dlnorm.c -o dlnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c plnorm.c -o plnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qlnorm.c -o qlnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rlnorm.c -o rlnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c df.c -o df.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pf.c -o pf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qf.c -o qf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rf.c -o rf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dnf.c -o dnf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dt.c -o dt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pt.c -o pt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qt.c -o qt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rt.c -o rt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dnt.c -o dnt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dchisq.c -o dchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pchisq.c -o pchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qchisq.c -o qchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rchisq.c -o rchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rnchisq.c -o rnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dbinom.c -o dbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pbinom.c -o pbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qbinom.c -o qbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rbinom.c -o rbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rmultinom.c -o rmultinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dcauchy.c -o dcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pcauchy.c -o pcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qcauchy.c -o qcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rcauchy.c -o rcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dexp.c -o dexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pexp.c -o pexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qexp.c -o qexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rexp.c -o rexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dgeom.c -o dgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pgeom.c -o pgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qgeom.c -o qgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rgeom.c -o rgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dhyper.c -o dhyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c phyper.c -o phyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qhyper.c -o qhyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rhyper.c -o rhyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dnbinom.c -o dnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pnbinom.c -o pnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qnbinom.c -o qnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rnbinom.c -o rnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dpois.c -o dpois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c ppois.c -o ppois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qpois.c -o qpois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rpois.c -o rpois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dweibull.c -o dweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pweibull.c -o pweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qweibull.c -o qweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rweibull.c -o rweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dlogis.c -o dlogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c plogis.c -o plogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qlogis.c -o qlogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rlogis.c -o rlogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dnchisq.c -o dnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pnchisq.c -o pnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qnchisq.c -o qnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dnbeta.c -o dnbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pnbeta.c -o pnbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qnbeta.c -o qnbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pnf.c -o pnf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c pnt.c -o pnt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qnf.c -o qnf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qnt.c -o qnt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c ptukey.c -o ptukey.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qtukey.c -o qtukey.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c toms708.c -o toms708.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c wilcox.c -o wilcox.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c signrank.c -o signrank.o x86_64-pc-linux-gnu-ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o x86_64-pc-linux-gnu-ranlib libnmath.a make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/unix' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c Rembedded.c -o Rembedded.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dynload.c -o dynload.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c system.c -o system.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sys-unix.c -o sys-unix.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sys-std.c -o sys-std.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c X11.c -o X11.o x86_64-pc-linux-gnu-ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o x86_64-pc-linux-gnu-ranlib libunix.a make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/unix' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/unix' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -DR_HOME='"/usr/lib64/R"' \ -o Rscript ./Rscript.c make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/unix' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/unix' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making main.d from main.c making mapply.d from mapply.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c CommandLineArgs.c -o CommandLineArgs.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c Rdynload.c -o Rdynload.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c Renviron.c -o Renviron.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c RNG.c -o RNG.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c agrep.c -o agrep.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c altrep.c -o altrep.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c apply.c -o apply.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c arithmetic.c -o arithmetic.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c array.c -o array.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c attrib.c -o attrib.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c bind.c -o bind.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c builtin.c -o builtin.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c character.c -o character.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c coerce.c -o coerce.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c colors.c -o colors.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c complex.c -o complex.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c connections.c -o connections.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c context.c -o context.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c cum.c -o cum.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dcf.c -o dcf.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c datetime.c -o datetime.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c debug.c -o debug.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c deparse.c -o deparse.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c devices.c -o devices.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dotcode.c -o dotcode.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dounzip.c -o dounzip.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dstruct.c -o dstruct.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c duplicate.c -o duplicate.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c edit.c -o edit.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c engine.c -o engine.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c envir.c -o envir.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c errors.c -o errors.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c eval.c -o eval.o In file included from /usr/include/string.h:494, from ../../src/include/Rinlinedfuns.h:73, from ../../src/include/Rinternals.h:1495, from ../../src/include/Defn.h:81, from eval.c:27: In function ‘strncpy’, inlined from ‘inflateAssignmentCall’ at eval.c:6085:5, inlined from ‘R_getBCInterpreterExpression’ at eval.c:6138:8: /usr/include/bits/string_fortified.h:106:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eval.c: In function ‘R_getBCInterpreterExpression’: eval.c:6078:19: note: length computed here 6078 | size_t slen = strlen(name); | ^~~~~~~~~~~~ x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c format.c -o format.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c gevents.c -o gevents.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c gram.c -o gram.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c gram-ex.c -o gram-ex.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c graphics.c -o graphics.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c grep.c -o grep.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c identical.c -o identical.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c inlined.c -o inlined.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c inspect.c -o inspect.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c internet.c -o internet.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c iosupport.c -o iosupport.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c lapack.c -o lapack.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c list.c -o list.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c localecharset.c -o localecharset.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c logic.c -o logic.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c main.c -o main.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c mapply.c -o mapply.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c match.c -o match.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c memory.c -o memory.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c names.c -o names.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c objects.c -o objects.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c options.c -o options.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c paste.c -o paste.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c platform.c -o platform.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c plot.c -o plot.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c plot3d.c -o plot3d.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c plotmath.c -o plotmath.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c print.c -o print.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c printarray.c -o printarray.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c printvector.c -o printvector.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c printutils.c -o printutils.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c qsort.c -o qsort.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c radixsort.c -o radixsort.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c random.c -o random.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c raw.c -o raw.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c registration.c -o registration.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c relop.c -o relop.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rlocale.c -o rlocale.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c saveload.c -o saveload.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c scan.c -o scan.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c seq.c -o seq.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c serialize.c -o serialize.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sort.c -o sort.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c source.c -o source.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c split.c -o split.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sprintf.c -o sprintf.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c startup.c -o startup.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c subassign.c -o subassign.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c subscript.c -o subscript.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c subset.c -o subset.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c summary.c -o summary.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c sysutils.c -o sysutils.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c times.c -o times.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c unique.c -o unique.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c util.c -o util.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c version.c -o version.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c g_alab_her.c -o g_alab_her.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c g_cntrlify.c -o g_cntrlify.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c g_fontdb.c -o g_fontdb.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c g_her_glyph.c -o g_her_glyph.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c xxxpr.f -o xxxpr.o x86_64-pc-linux-gnu-gcc -shared -fopenmp -Wl,-O1 -Wl,--as-needed -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -lblas -lgfortran -lm -lquadmath -lreadline -lpcre2-8 -lpcre -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' mkdir -p -- /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/bin/exec mkdir -p -- /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c Rmain.c -o Rmain.o x86_64-pc-linux-gnu-gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-O1 -Wl,--as-needed -o R.bin Rmain.o -lR make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/main' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making nanoftp.d from nanoftp.c making nanohttp.d from nanohttp.c making sock.d from sock.c making sockconn.d from sockconn.c make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/internet' x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c Rsock.c -o Rsock.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c internet.c -o internet.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c libcurl.c -o libcurl.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c nanoftp.c -o nanoftp.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c nanohttp.c -o nanohttp.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c sock.c -o sock.o x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -fvisibility=hidden -c sockconn.c -o sockconn.o x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,-O1 -Wl,--as-needed -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl -lssl -lcrypto -lssl -lcrypto -lldap -llber -lz -lR make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/internet' mkdir -p -- /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/modules make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/internet' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/internet' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/internet' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' making Lapack.d from Lapack.c make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -msse2 -mfpmath=sse -c dlamch.f -o dlamch.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c dlapack.f -o dlapack.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -O2 -pipe -c cmplx.f -o cmplx.o x86_64-pc-linux-gnu-gcc -shared -fopenmp -Wl,-O1 -Wl,--as-needed -o libRlapack.so dlamch.o dlapack.o cmplx.o -lblas -lgfortran -lm -lquadmath make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c Lapack.c -o Lapack.o x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,-O1 -Wl,--as-needed -o lapack.so Lapack.o -lR -L"../../../lib" -lRlapack -lblas -lgfortran -lm -lquadmath make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib/libRlapack.so is unchanged make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/lapack' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/X11' x86_64-pc-linux-gnu-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/uuid -I/usr/include/libdrm -I/usr/include/libpng16 -I/usr/include/harfbuzz -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c devX11.c -o devX11.o x86_64-pc-linux-gnu-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/uuid -I/usr/include/libdrm -I/usr/include/libpng16 -I/usr/include/harfbuzz -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rotated.c -o rotated.o x86_64-pc-linux-gnu-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/uuid -I/usr/include/libdrm -I/usr/include/libpng16 -I/usr/include/harfbuzz -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c rbitmap.c -o rbitmap.o x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,-O1 -Wl,--as-needed -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm x86_64-pc-linux-gnu-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/uuid -I/usr/include/libdrm -I/usr/include/libpng16 -I/usr/include/harfbuzz -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c dataentry.c -o dataentry.o x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,-O1 -Wl,--as-needed -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/X11' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/X11' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/X11' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules/X11' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/modules' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' mkdir -p -- ../../library make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/profile' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/translations' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/translations' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/translations' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' building package 'base' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' mkdir -p -- ../../../library/base/demo make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' mkdir -p -- ../../../library/tools/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c text.c -o text.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c Rmd5.c -o Rmd5.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c md5.c -o md5.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c signals.c -o signals.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c install.c -o install.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c getfmts.c -o getfmts.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c http.c -o http.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c gramLatex.c -o gramLatex.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c gramRd.c -o gramRd.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' installing 'sysdata.rda' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/compiler' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/compiler' byte-compiling package 'compiler' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/compiler' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/compiler' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' byte-compiling package 'base' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' byte-compiling package 'tools' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tools' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c io.c -o io.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c size.c -o size.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c sock.c -o sock.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c stubs.c -o stubs.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c utils.c -o utils.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' installing 'sysdata.rda' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' byte-compiling package 'utils' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/utils' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/icc make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c axis_scales.c -o axis_scales.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c chull.c -o chull.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c devices.c -o devices.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c stubs.c -o stubs.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c colors.c -o colors.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c devCairo.c -o devCairo.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c devPicTeX.c -o devPicTeX.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c devPS.c -o devPS.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -O2 -pipe -march=native -c devQuartz.c -o devQuartz.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[7]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[8]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src/cairo' make[9]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src/cairo' x86_64-pc-linux-gnu-gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/uuid -I/usr/include/libdrm -I/usr/include/libpng16 -I/usr/include/harfbuzz -I../../../../../src/modules/X11 -DHAVE_CONFIG_H -fopenmp -fpic -O2 -pipe -march=native -c cairoBM.c -o cairoBM.o x86_64-pc-linux-gnu-gcc -shared -L"../../../../../lib" -Wl,-O1 -Wl,--as-needed -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -L"../../../../../lib" -lR -lm make[9]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src/cairo' make[8]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src/cairo' make[7]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src/cairo' make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' byte-compiling package 'grDevices' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grDevices' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c base.c -o base.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c graphics.c -o graphics.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c par.c -o par.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c plot.c -o plot.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c plot3d.c -o plot3d.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -O2 -pipe -march=native -c stem.c -o stem.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' byte-compiling package 'graphics' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/graphics' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' mkdir -p -- ../../../library/stats/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c kmeans.c -o kmeans.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c ansari.c -o ansari.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c bandwidths.c -o bandwidths.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c chisqsim.c -o chisqsim.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c d2x2xk.c -o d2x2xk.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c fexact.c -o fexact.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c kendall.c -o kendall.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c ks.c -o ks.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c line.c -o line.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c smooth.c -o smooth.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c prho.c -o prho.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c swilk.c -o swilk.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c ksmooth.c -o ksmooth.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c loessc.c -o loessc.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c monoSpl.c -o monoSpl.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c isoreg.c -o isoreg.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c Srunmed.c -o Srunmed.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c dblcen.c -o dblcen.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c distance.c -o distance.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c hclust-utils.c -o hclust-utils.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c nls.c -o nls.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c rWishart.c -o rWishart.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c HoltWinters.c -o HoltWinters.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c PPsum.c -o PPsum.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c arima.c -o arima.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c burg.c -o burg.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c filter.c -o filter.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c mAR.c -o mAR.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c pacf.c -o pacf.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c starma.c -o starma.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c port.c -o port.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c family.c -o family.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c sbart.c -o sbart.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c approx.c -o approx.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c loglin.c -o loglin.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c lowess.c -o lowess.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c massdist.c -o massdist.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c splines.c -o splines.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c lm.c -o lm.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c complete_cases.c -o complete_cases.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c cov.c -o cov.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c deriv.c -o deriv.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c fft.c -o fft.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c fourier.c -o fourier.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c model.c -o model.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c optim.c -o optim.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c optimize.c -o optimize.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c integrate.c -o integrate.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c random.c -o random.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c distn.c -o distn.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c zeroin.c -o zeroin.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c rcont.c -o rcont.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -pipe -march=native -c influence.c -o influence.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c bsplvd.f -o bsplvd.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c bvalue.f -o bvalue.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c bvalus.f -o bvalus.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c loessf.f -o loessf.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c ppr.f -o ppr.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c qsbart.f -o qsbart.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c sgram.f -o sgram.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c sinerp.f -o sinerp.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c sslvrg.f -o sslvrg.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c stxwx.f -o stxwx.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c hclust.f -o hclust.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c kmns.f -o kmns.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c eureka.f -o eureka.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c stl.f -o stl.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -msse2 -mfpmath=sse -c portsrc.f -o portsrc.o x86_64-pc-linux-gnu-gfortran -fvisibility=hidden -fpic -O2 -pipe -c lminfl.f -o lminfl.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -L../../../../lib -lRlapack -lblas -lgfortran -lm -lquadmath -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' byte-compiling package 'stats' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/datasets' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/datasets' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' mkdir -p -- ../../../library/methods/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c do_substitute_direct.c -o do_substitute_direct.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c methods_list_dispatch.c -o methods_list_dispatch.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c slot.c -o slot.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c class_support.c -o class_support.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c tests.c -o tests.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c utils.c -o utils.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' byte-compiling 'methods' initializing class and method definitions ... done make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/methods' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' mkdir -p -- ../../../library/grid/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid/src' making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making matrix.d from matrix.c making register.d from register.c making state.d from state.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c gpar.c -o gpar.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c grid.c -o grid.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c just.c -o just.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c layout.c -o layout.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c matrix.c -o matrix.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c register.c -o register.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c state.c -o state.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c unit.c -o unit.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c util.c -o util.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c viewport.c -o viewport.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' byte-compiling package 'grid' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/grid' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' mkdir -p -- ../../../library/splines/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines/src' making splines.d from splines.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c splines.c -o splines.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o splines.so splines.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' byte-compiling package 'splines' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/splines' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats4' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats4' byte-compiling package 'stats4' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats4' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/stats4' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tcltk' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/tcltk' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c rngstream.c -o rngstream.o x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -pipe -march=native -c fork.c -o fork.o x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,-O1 -Wl,--as-needed -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[6]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[6]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel/src' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel/src' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' byte-compiling package 'parallel' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/parallel' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/base' installing parsed NAMESPACE files make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' you should 'make docs' now ... make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc' creating doc/NEWS creating doc/NEWS.pdf make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/html' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/html' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc/manual' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/doc' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' installing parsed Rd make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' building/updating package metadata ... make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' writing package indices make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/Recommended' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/Recommended' begin installing recommended package MASS * installing *source* package ‘MASS’ ... ** package ‘MASS’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpaSBWqE/R.INSTALL1519486afd83/MASS/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c MASS.c -o MASS.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c lqs.c -o lqs.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o MASS.so MASS.o lqs.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpaSBWqE/R.INSTALL1519486afd83/MASS/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (MASS) begin installing recommended package lattice * installing *source* package ‘lattice’ ... ** package ‘lattice’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpMxIebu/R.INSTALL1534527f4512/lattice/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c threeDplot.c -o threeDplot.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o lattice.so init.o threeDplot.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpMxIebu/R.INSTALL1534527f4512/lattice/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (lattice) begin installing recommended package Matrix * installing *source* package ‘Matrix’ ... ** package ‘Matrix’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c CHMfactor.c -o CHMfactor.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c Csparse.c -o Csparse.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c TMatrix_as.c -o TMatrix_as.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c Tsparse.c -o Tsparse.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c Mutils.c -o Mutils.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c chm_common.c -o chm_common.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c cs.c -o cs.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c cs_utils.c -o cs_utils.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dense.c -o dense.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dgCMatrix.c -o dgCMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dgTMatrix.c -o dgTMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dgeMatrix.c -o dgeMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dpoMatrix.c -o dpoMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dppMatrix.c -o dppMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dsCMatrix.c -o dsCMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dsyMatrix.c -o dsyMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dspMatrix.c -o dspMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dtCMatrix.c -o dtCMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dtTMatrix.c -o dtTMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dtrMatrix.c -o dtrMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c dtpMatrix.c -o dtpMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c factorizations.c -o factorizations.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c ldense.c -o ldense.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c lgCMatrix.c -o lgCMatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c sparseQR.c -o sparseQR.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -pipe -march=native -c abIndex.c -o abIndex.o make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD' ( cd Lib ; make clean ) make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD/Lib' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD' ( cd Source ; make clean ) make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD/Source' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD' ( cd Source ; make clean ) make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD/Source' make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD/Source' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/SuiteSparse_config' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/SuiteSparse_config' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD' ( cd Lib ; make -f "/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/etc/Makeconf" -f Makefile ) make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD/Lib' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_aat.c -o cholmod_aat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_add.c -o cholmod_add.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_band.c -o cholmod_band.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_common.c -o cholmod_common.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_complex.c -o cholmod_complex.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_copy.c -o cholmod_copy.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_dense.c -o cholmod_dense.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_error.c -o cholmod_error.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_factor.c -o cholmod_factor.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_memory.c -o cholmod_memory.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_sparse.c -o cholmod_sparse.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_transpose.c -o cholmod_transpose.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_triplet.c -o cholmod_triplet.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Core/cholmod_version.c -o cholmod_version.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Check/cholmod_check.c -o cholmod_check.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Check/cholmod_read.c -o cholmod_read.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Check/cholmod_write.c -o cholmod_write.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Modify/cholmod_updown.c -o cholmod_updown.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -pipe -march=native -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o x86_64-pc-linux-gnu-ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/CHOLMOD' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD' ( cd Source ; make -f "/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD/Source' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -c colamd_global.c -o colamd_global.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -c colamd.c -o colamd.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c colamd.c -o colamd_l.o x86_64-pc-linux-gnu-ar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/COLAMD' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD' ( cd Source ; make -f "/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD/Source' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_1.c -o amd_i_1.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_1.c -o amd_l_1.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_2.c -o amd_i_2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_2.c -o amd_l_2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_order.c -o amd_i_order.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_order.c -o amd_l_order.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_control.c -o amd_i_control.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_control.c -o amd_l_control.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_info.c -o amd_i_info.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_info.c -o amd_l_info.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDINT -c amd_global.c -o amd_i_global.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -pipe -march=native -I../Include -DDLONG -c amd_global.c -o amd_l_global.o x86_64-pc-linux-gnu-ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o make[5]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD/Source' make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/AMD' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/SuiteSparse_config' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -DNTIMER -fpic -O2 -pipe -march=native -c SuiteSparse_config.c -o SuiteSparse_config.o x86_64-pc-linux-gnu-ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src/SuiteSparse_config' x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lRlapack -lblas -lgfortran -lm -lquadmath -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpXZzySK/R.INSTALL154f14870da4/Matrix/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘chol2inv’ from ‘base’ in package ‘Matrix’ (from the saved implicit definition) Creating a generic function for ‘chol2inv’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘diag’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘drop’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘cov2cor’ from package ‘stats’ in package ‘Matrix’ Creating a generic function for ‘unname’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘rcond’ from ‘base’ in package ‘Matrix’ (from the saved implicit definition) Creating a generic function for ‘rcond’ from package ‘base’ in package ‘Matrix’ in method for ‘coerce’ with signature ‘"matrix.csr","dgRMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"dgRMatrix","matrix.csr"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.csc","dgCMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"dgCMatrix","matrix.csc"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.coo","dgTMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"dgTMatrix","matrix.coo"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"dsparseMatrix","matrix.csr"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.csr","dgCMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","dgCMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csr","RsparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.csc","CsparseMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.coo","TsparseMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csr","CsparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","CsparseMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csc","TsparseMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csr","TsparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"CsparseMatrix","matrix.csr"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"CsparseMatrix","matrix.coo"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"CsparseMatrix","matrix.csc"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csr","Matrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","Matrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csc","Matrix"’: no definition for class “matrix.csc” Creating a generic function for ‘colSums’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘Matrix’ in method for ‘colSums’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix” in method for ‘rowSums’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix” in method for ‘colMeans’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix” in method for ‘rowMeans’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix” Creating a generic function for ‘zapsmall’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘diag<-’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘crossprod’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘tcrossprod’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘which’ from package ‘base’ in package ‘Matrix’ in method for ‘coerce’ with signature ‘"graphAM","sparseMatrix"’: no definition for class “graphAM” in method for ‘coerce’ with signature ‘"graph","CsparseMatrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"graph","Matrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"graphNEL","CsparseMatrix"’: no definition for class “graphNEL” in method for ‘coerce’ with signature ‘"graphNEL","TsparseMatrix"’: no definition for class “graphNEL” in method for ‘coerce’ with signature ‘"sparseMatrix","graph"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"sparseMatrix","graphNEL"’: no definition for class “graphNEL” in method for ‘coerce’ with signature ‘"TsparseMatrix","graphNEL"’: no definition for class “graphNEL” Creating a generic function for ‘qr.R’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.Q’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.qy’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.qty’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.coef’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.resid’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.fitted’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘toeplitz’ from package ‘stats’ in package ‘Matrix’ ** help *** installing help indices ** building package indices Loading required package: Matrix ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) begin installing recommended package nlme * installing *source* package ‘nlme’ ... ** package ‘nlme’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpE08dXF/R.INSTALL174e1ddea1c2/nlme/src' x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c chol.f -o chol.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c corStruct.c -o corStruct.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c gnls.c -o gnls.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c matrix.c -o matrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c nlOptimizer.c -o nlOptimizer.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c nlme.c -o nlme.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c nlmefit.c -o nlmefit.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c pdMat.c -o pdMat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fvisibility=hidden -fpic -O2 -pipe -march=native -c pythag.c -o pythag.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c rs.f -o rs.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -lgfortran -lm -lquadmath -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpE08dXF/R.INSTALL174e1ddea1c2/nlme/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nlme) begin installing recommended package survival * installing *source* package ‘survival’ ... ** package ‘survival’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmpn2er74/R.INSTALL1784674a7ab3/survival/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agexact.c -o agexact.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agfit4.c -o agfit4.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agfit5.c -o agfit5.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agmart.c -o agmart.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agmart2.c -o agmart2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agmart3.c -o agmart3.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agscore.c -o agscore.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agsurv3.c -o agsurv3.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agsurv4.c -o agsurv4.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c agsurv5.c -o agsurv5.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c chinv2.c -o chinv2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c chinv3.c -o chinv3.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c cholesky2.c -o cholesky2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c cholesky3.c -o cholesky3.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c cholesky5.c -o cholesky5.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c chsolve2.c -o chsolve2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c chsolve3.c -o chsolve3.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c chsolve5.c -o chsolve5.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c concordance1.c -o concordance1.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c concordance3.c -o concordance3.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c cox_Rcallback.c -o cox_Rcallback.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxcount1.c -o coxcount1.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxdetail.c -o coxdetail.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxexact.c -o coxexact.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxfit5.c -o coxfit5.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxfit6.c -o coxfit6.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxmart.c -o coxmart.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxmart2.c -o coxmart2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxph_wtest.c -o coxph_wtest.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxsafe.c -o coxsafe.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxscho.c -o coxscho.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c coxscore.c -o coxscore.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c dmatrix.c -o dmatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c doloop.c -o doloop.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c finegray.c -o finegray.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c gchol.c -o gchol.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c norisk.c -o norisk.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pyears1.c -o pyears1.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pyears2.c -o pyears2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pyears3b.c -o pyears3b.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pystep.c -o pystep.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survConcordance.c -o survConcordance.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survdiff2.c -o survdiff2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survfit4.c -o survfit4.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survfitci.c -o survfitci.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survpenal.c -o survpenal.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survreg6.c -o survreg6.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survreg7.c -o survreg7.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survregc1.c -o survregc1.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survregc2.c -o survregc2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c survsplit.c -o survsplit.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c tmerge.c -o tmerge.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart2.o agmart3.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o concordance1.o concordance3.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o finegray.o gchol.o init.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmpn2er74/R.INSTALL1784674a7ab3/survival/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) begin installing recommended package boot * installing *source* package ‘boot’ ... ** package ‘boot’ successfully unpacked and MD5 sums checked ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (boot) begin installing recommended package cluster * installing *source* package ‘cluster’ ... ** package ‘cluster’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpJHNsHp/R.INSTALL184816ad6b7a/cluster/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c clara.c -o clara.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c daisy.f -o daisy.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c dysta.f -o dysta.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c fanny.c -o fanny.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c mona.c -o mona.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pam.c -o pam.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c sildist.c -o sildist.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c spannel.c -o spannel.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c twins.c -o twins.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -lgfortran -lm -lquadmath -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpJHNsHp/R.INSTALL184816ad6b7a/cluster/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (cluster) begin installing recommended package codetools * installing *source* package ‘codetools’ ... ** package ‘codetools’ successfully unpacked and MD5 sums checked ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (codetools) begin installing recommended package foreign * installing *source* package ‘foreign’ ... ** package ‘foreign’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmp8D2YZ2/R.INSTALL188b35089f80/foreign/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c R_systat.c -o R_systat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c Rdbfread.c -o Rdbfread.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c Rdbfwrite.c -o Rdbfwrite.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c SASxport.c -o SASxport.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c avl.c -o avl.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c dbfopen.c -o dbfopen.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c file-handle.c -o file-handle.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c format.c -o format.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c minitab.c -o minitab.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pfm-read.c -o pfm-read.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c sfm-read.c -o sfm-read.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c spss.c -o spss.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c stataread.c -o stataread.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmp8D2YZ2/R.INSTALL188b35089f80/foreign/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (foreign) begin installing recommended package KernSmooth * installing *source* package ‘KernSmooth’ ... ** package ‘KernSmooth’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpMeFtZI/R.INSTALL18ca3da01dea/KernSmooth/src' x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c blkest.f -o blkest.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c cp.f -o cp.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c dgedi.f -o dgedi.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c dgefa.f -o dgefa.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c dgesl.f -o dgesl.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c linbin.f -o linbin.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c linbin2D.f -o linbin2D.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c locpoly.f -o locpoly.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c rlbin.f -o rlbin.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c sdiag.f -o sdiag.o x86_64-pc-linux-gnu-gfortran -fpic -O2 -pipe -c sstdiag.f -o sstdiag.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpMeFtZI/R.INSTALL18ca3da01dea/KernSmooth/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) begin installing recommended package rpart * installing *source* package ‘rpart’ ... ** package ‘rpart’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpG1ZsKY/R.INSTALL1903c0b0040/rpart/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c anova.c -o anova.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c anovapred.c -o anovapred.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c branch.c -o branch.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c bsplit.c -o bsplit.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c choose_surg.c -o choose_surg.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c fix_cp.c -o fix_cp.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c free_tree.c -o free_tree.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c gini.c -o gini.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c graycode.c -o graycode.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c insert_split.c -o insert_split.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c make_cp_list.c -o make_cp_list.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c make_cp_table.c -o make_cp_table.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c mysort.c -o mysort.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c nodesplit.c -o nodesplit.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c partition.c -o partition.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c poisson.c -o poisson.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pred_rpart.c -o pred_rpart.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c print_tree.c -o print_tree.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rpart.c -o rpart.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rpart_callback.c -o rpart_callback.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rpartexp.c -o rpartexp.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rpartexp2.c -o rpartexp2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rpcountup.c -o rpcountup.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rpmatrix.c -o rpmatrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rundown.c -o rundown.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c rundown2.c -o rundown2.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c surrogate.c -o surrogate.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c usersplit.c -o usersplit.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c xpred.c -o xpred.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c xval.c -o xval.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpG1ZsKY/R.INSTALL1903c0b0040/rpart/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) begin installing recommended package class * installing *source* package ‘class’ ... ** package ‘class’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpaabUcp/R.INSTALL1975313d77a/class/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c class.c -o class.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o class.so class.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/RtmpaabUcp/R.INSTALL1975313d77a/class/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (class) begin installing recommended package nnet * installing *source* package ‘nnet’ ... ** package ‘nnet’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmpryi4b9/R.INSTALL198d6d8aa622/nnet/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c nnet.c -o nnet.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o nnet.so nnet.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmpryi4b9/R.INSTALL198d6d8aa622/nnet/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nnet) begin installing recommended package spatial * installing *source* package ‘spatial’ ... ** package ‘spatial’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmp6fv0NH/R.INSTALL19a526409eff/spatial/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c krc.c -o krc.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fpic -O2 -pipe -march=native -c pps.c -o pps.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o spatial.so init.o krc.o pps.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmp6fv0NH/R.INSTALL19a526409eff/spatial/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (spatial) begin installing recommended package mgcv * installing *source* package ‘mgcv’ ... ** package ‘mgcv’ successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmp3pkxHB/R.INSTALL19c3433dccf4/mgcv/src' x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c coxph.c -o coxph.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c discrete.c -o discrete.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c gdi.c -o gdi.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c init.c -o init.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c magic.c -o magic.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c mat.c -o mat.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c matrix.c -o matrix.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c mgcv.c -o mgcv.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c misc.c -o misc.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c mvn.c -o mvn.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c qp.c -o qp.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c soap.c -o soap.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c sparse-smooth.c -o sparse-smooth.o x86_64-pc-linux-gnu-gcc -I"/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/include" -DNDEBUG -fopenmp -fpic -O2 -pipe -march=native -c tprs.c -o tprs.o x86_64-pc-linux-gnu-gcc -shared -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -Wl,-O1 -Wl,--as-needed -o mgcv.so coxph.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o tprs.o -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lRlapack -lblas -lgfortran -lm -lquadmath -fopenmp -L/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/lib -lR make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/temp/Rtmp3pkxHB/R.INSTALL19c3433dccf4/mgcv/src' installing to /var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (mgcv) make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/Recommended' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library/Recommended' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/library' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3' make -j1 -C src/nmath/standalone shared AR=x86_64-pc-linux-gnu-ar make: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath/standalone' (cd ../../include; make Rmath.h) make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/include' Copying source files make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath/standalone' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath/standalone' x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c mlutils.c -o mlutils.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c d1mach.c -o d1mach.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c i1mach.c -o i1mach.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c fmax2.c -o fmax2.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c fmin2.c -o fmin2.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c fprec.c -o fprec.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c fround.c -o fround.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c ftrunc.c -o ftrunc.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c sign.c -o sign.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c fsign.c -o fsign.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c imax2.c -o imax2.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c imin2.c -o imin2.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c chebyshev.c -o chebyshev.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c log1p.c -o log1p.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c lgammacor.c -o lgammacor.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c gammalims.c -o gammalims.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c stirlerr.c -o stirlerr.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c bd0.c -o bd0.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c gamma.c -o gamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c lgamma.c -o lgamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c gamma_cody.c -o gamma_cody.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c beta.c -o beta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c lbeta.c -o lbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c polygamma.c -o polygamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c cospi.c -o cospi.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c bessel_i.c -o bessel_i.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c bessel_j.c -o bessel_j.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c bessel_k.c -o bessel_k.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c bessel_y.c -o bessel_y.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c choose.c -o choose.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c snorm.c -o snorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c sexp.c -o sexp.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dgamma.c -o dgamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pgamma.c -o pgamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qgamma.c -o qgamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rgamma.c -o rgamma.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dbeta.c -o dbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pbeta.c -o pbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qbeta.c -o qbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rbeta.c -o rbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dunif.c -o dunif.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c punif.c -o punif.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qunif.c -o qunif.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c runif.c -o runif.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dnorm.c -o dnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pnorm.c -o pnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qnorm.c -o qnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rnorm.c -o rnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dlnorm.c -o dlnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c plnorm.c -o plnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qlnorm.c -o qlnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rlnorm.c -o rlnorm.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c df.c -o df.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pf.c -o pf.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qf.c -o qf.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rf.c -o rf.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dnf.c -o dnf.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dt.c -o dt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pt.c -o pt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qt.c -o qt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rt.c -o rt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dnt.c -o dnt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dchisq.c -o dchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pchisq.c -o pchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qchisq.c -o qchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rchisq.c -o rchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rnchisq.c -o rnchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dbinom.c -o dbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pbinom.c -o pbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qbinom.c -o qbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rbinom.c -o rbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rmultinom.c -o rmultinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dcauchy.c -o dcauchy.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pcauchy.c -o pcauchy.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qcauchy.c -o qcauchy.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rcauchy.c -o rcauchy.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dexp.c -o dexp.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pexp.c -o pexp.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qexp.c -o qexp.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rexp.c -o rexp.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dgeom.c -o dgeom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pgeom.c -o pgeom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qgeom.c -o qgeom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rgeom.c -o rgeom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dhyper.c -o dhyper.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c phyper.c -o phyper.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qhyper.c -o qhyper.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rhyper.c -o rhyper.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dnbinom.c -o dnbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pnbinom.c -o pnbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qnbinom.c -o qnbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rnbinom.c -o rnbinom.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dpois.c -o dpois.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c ppois.c -o ppois.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qpois.c -o qpois.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rpois.c -o rpois.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dweibull.c -o dweibull.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pweibull.c -o pweibull.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qweibull.c -o qweibull.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rweibull.c -o rweibull.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dlogis.c -o dlogis.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c plogis.c -o plogis.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qlogis.c -o qlogis.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c rlogis.c -o rlogis.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dnchisq.c -o dnchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pnchisq.c -o pnchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qnchisq.c -o qnchisq.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c dnbeta.c -o dnbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pnbeta.c -o pnbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qnbeta.c -o qnbeta.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pnf.c -o pnf.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c pnt.c -o pnt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qnf.c -o qnf.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qnt.c -o qnt.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c ptukey.c -o ptukey.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c qtukey.c -o qtukey.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c toms708.c -o toms708.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c wilcox.c -o wilcox.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c signrank.c -o signrank.lo x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fopenmp -fpic -O2 -pipe -march=native -c std_unif.c -o std_unif.lo x86_64-pc-linux-gnu-gcc -shared -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-soname=libRmath.so mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm -o libRmath.so make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath/standalone' make: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/src/nmath/standalone' >>> Source compiled. >>> Test phase: dev-lang/R-3.5.3 make -j1 check make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests/Examples' Testing examples for package ‘base’ Testing examples for package ‘tools’ comparing ‘tools-Ex.Rout’ to ‘tools-Ex.Rout.save’ ... OK Testing examples for package ‘utils’ Testing examples for package ‘grDevices’ comparing ‘grDevices-Ex.Rout’ to ‘grDevices-Ex.Rout.save’ ... OK Testing examples for package ‘graphics’ comparing ‘graphics-Ex.Rout’ to ‘graphics-Ex.Rout.save’ ... OK Testing examples for package ‘stats’ comparing ‘stats-Ex.Rout’ to ‘stats-Ex.Rout.save’ ... OK Testing examples for package ‘datasets’ comparing ‘datasets-Ex.Rout’ to ‘datasets-Ex.Rout.save’ ... OK Testing examples for package ‘methods’ Testing examples for package ‘grid’ comparing ‘grid-Ex.Rout’ to ‘grid-Ex.Rout.save’ ... OK Testing examples for package ‘splines’ comparing ‘splines-Ex.Rout’ to ‘splines-Ex.Rout.save’ ... OK Testing examples for package ‘stats4’ comparing ‘stats4-Ex.Rout’ to ‘stats4-Ex.Rout.save’ ... OK Testing examples for package ‘tcltk’ Testing examples for package ‘compiler’ Testing examples for package ‘parallel’ make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests/Examples' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running strict specific tests make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running code in 'eval-etc.R' ... OK comparing 'eval-etc.Rout' to './eval-etc.Rout.save' ... OK running code in 'simple-true.R' ... OK comparing 'simple-true.Rout' to './simple-true.Rout.save' ... OK running code in 'arith-true.R' ... OK comparing 'arith-true.Rout' to './arith-true.Rout.save' ... OK running code in 'arith.R' ... OK comparing 'arith.Rout' to './arith.Rout.save' ... OK running code in 'lm-tests.R' ... OK comparing 'lm-tests.Rout' to './lm-tests.Rout.save' ... OK running code in 'ok-errors.R' ... OK comparing 'ok-errors.Rout' to './ok-errors.Rout.save' ... OK running code in 'method-dispatch.R' ... OK comparing 'method-dispatch.Rout' to './method-dispatch.Rout.save' ... OK running code in 'any-all.R' ... OK comparing 'any-all.Rout' to './any-all.Rout.save' ... OK running code in 'd-p-q-r-tests.R' ... OK comparing 'd-p-q-r-tests.Rout' to './d-p-q-r-tests.Rout.save' ... OK make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running sloppy specific tests make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running code in 'complex.R' ... OK comparing 'complex.Rout' to './complex.Rout.save' ... OK running code in 'eval-etc-2.R' ... OK comparing 'eval-etc-2.Rout' to './eval-etc-2.Rout.save' ... OK running code in 'print-tests.R' ... OK comparing 'print-tests.Rout' to './print-tests.Rout.save' ... OK running code in 'lapack.R' ... OK comparing 'lapack.Rout' to './lapack.Rout.save' ... OK running code in 'datasets.R' ... OK comparing 'datasets.Rout' to './datasets.Rout.save' ... OK running code in 'datetime.R' ... OK comparing 'datetime.Rout' to './datetime.Rout.save' ... OK running code in 'iec60559.R' ... OK comparing 'iec60559.Rout' to './iec60559.Rout.save' ... OK make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' checking Sys.timezone ... make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running code in 'timezone.R' ... OK make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running regression tests ... make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' running code in 'array-subset.R' ... OK running code in 'reg-tests-1a.R' ... OK running code in 'reg-tests-1b.R' ... OK running code in 'reg-tests-1c.R' ... OK running code in 'reg-tests-1d.R' ...make[3]: *** [Makefile.common:105: reg-tests-1d.Rout] Error 1 make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[2]: *** [Makefile.common:291: test-Reg] Error 2 make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make[1]: *** [Makefile.common:170: test-all-basics] Error 1 make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests' make: *** [Makefile:241: check] Error 2 * ERROR: dev-lang/R-3.5.3::gentoo failed (test phase): * Make check failed. See above for details. * * Call stack: * ebuild.sh, line 124: Called src_test * environment, line 2247: Called default * phase-functions.sh, line 872: Called default_src_test * phase-functions.sh, line 901: Called __eapi0_src_test * phase-helpers.sh, line 816: Called die * The specific snippet of code: * $emake_cmd ${internal_opts} check || \ * die "Make check failed. See above for details." * * If you need support, post the output of `emerge --info '=dev-lang/R-3.5.3::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-lang/R-3.5.3::gentoo'`. * The complete build log is located at '/var/log/portage/dev-lang:R-3.5.3:20190604-045923.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-lang/R-3.5.3/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/R-3.5.3/temp/environment'. * Working directory: '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3' * S: '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3'