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Gentoo's Bugzilla – Attachment 570834 Details for
Bug 681786
=sci-libs/scipy-1.{0,1}.0: ImportError: libgfortran.so.4: cannot open shared object file: No such file or directory
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build.log
build.log (text/x-log), 4.23 KB, created by
Till Schäfer
on 2019-03-26 10:20:14 UTC
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Description:
build.log
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Creator:
Till Schäfer
Created:
2019-03-26 10:20:14 UTC
Size:
4.23 KB
patch
obsolete
> * Package: sci-libs/scipy-1.1.0 > * Repository: gentoo > * Maintainer: sci@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_6 userland_GNU > * FEATURES: compressdebug network-sandbox preserve-libs sandbox splitdebug userpriv usersandbox > * Using following Fortran compiler: > * F77: x86_64-pc-linux-gnu-gfortran > * FC: x86_64-pc-linux-gnu-gfortran >>>> Unpacking source... >>>> Unpacking scipy-1.1.0.tar.gz to /var/tmp/portage/sci-libs/scipy-1.1.0/work >>>> Source unpacked in /var/tmp/portage/sci-libs/scipy-1.1.0/work >>>> Preparing source in /var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0 ... > * Will copy sources from /var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0 > * python2_7: copying to /var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0-python2_7 > * python3_6: copying to /var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0-python3_6 >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0 ... > * python2_7: running distutils-r1_run_phase python_compile >scipy/linalg/_generate_pyx.py: all files up-to-date >Traceback (most recent call last): > File "scipy/special/_generate_pyx.py", line 152, in <module> > import numpy > File "/usr/lib64/python2.7/site-packages/numpy/__init__.py", line 142, in <module> > from . import add_newdocs > File "/usr/lib64/python2.7/site-packages/numpy/add_newdocs.py", line 13, in <module> > from numpy.lib import add_newdoc > File "/usr/lib64/python2.7/site-packages/numpy/lib/__init__.py", line 19, in <module> > from .polynomial import * > File "/usr/lib64/python2.7/site-packages/numpy/lib/polynomial.py", line 20, in <module> > from numpy.linalg import eigvals, lstsq, inv > File "/usr/lib64/python2.7/site-packages/numpy/linalg/__init__.py", line 51, in <module> > from .linalg import * > File "/usr/lib64/python2.7/site-packages/numpy/linalg/linalg.py", line 31, in <module> > from numpy.linalg import lapack_lite, _umath_linalg >ImportError: libgfortran.so.4: cannot open shared object file: No such file or directory >Running scipy/special/_generate_pyx.py >Running scipy/linalg/_generate_pyx.py >Traceback (most recent call last): > File "tools/cythonize.py", line 306, in <module> > main() > File "tools/cythonize.py", line 302, in main > find_process_files(root_dir) > File "tools/cythonize.py", line 268, in find_process_files > for result in pool.imap_unordered(lambda fn: process_generate_pyx(fn, lock), jobs): > File "/usr/lib64/python2.7/multiprocessing/pool.py", line 673, in next > raise value >RuntimeError: Running scipy/special/_generate_pyx.py failed > * ERROR: sci-libs/scipy-1.1.0::gentoo failed (compile phase): > * (no error message) > * > * Call stack: > * ebuild.sh, line 124: Called src_compile > * environment, line 4187: Called distutils-r1_src_compile > * environment, line 1220: Called _distutils-r1_run_foreach_impl 'python_compile' > * environment, line 388: Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile' > * environment, line 3619: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > * environment, line 2748: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > * environment, line 2746: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile' > * environment, line 854: Called distutils-r1_run_phase 'python_compile' > * environment, line 1213: Called python_compile > * environment, line 3204: Called die > * The specific snippet of code: > * ${EPYTHON} tools/cythonize.py || die; > * > * If you need support, post the output of `emerge --info '=sci-libs/scipy-1.1.0::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-libs/scipy-1.1.0::gentoo'`. > * The complete build log is located at '/var/tmp/portage/sci-libs/scipy-1.1.0/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-1.1.0/temp/environment'. > * Working directory: '/var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0-python2_7' > * S: '/var/tmp/portage/sci-libs/scipy-1.1.0/work/scipy-1.1.0'
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bug 681786
: 570834