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Gentoo's Bugzilla – Attachment 551180 Details for
Bug 668598
sci-libs/shogun-5.0.0: CMake Error at CMakeLists.txt:700: Python module ply required for meta examples. Disable meta examples or install python-ply
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CMakeError.log
CMakeError.log (text/plain), 11.94 KB, created by
Toralf Förster
on 2018-10-14 11:30:39 UTC
(
hide
)
Description:
CMakeError.log
Filename:
MIME Type:
Creator:
Toralf Förster
Created:
2018-10-14 11:30:39 UTC
Size:
11.94 KB
patch
obsolete
>Determining if the isfinite exist failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_da915/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_da915.dir/build.make CMakeFiles/cmTC_da915.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building CXX object CMakeFiles/cmTC_da915.dir/CheckSymbolExists.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DNDEBUG -std=c++11 -O2 -pipe -march=native -o CMakeFiles/cmTC_da915.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function âint main(int, char**)â: >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: âisfiniteâ was not declared in this scope > return ((int*)(&isfinite))[argc]; > ^~~~~~~~ >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: note: suggested alternative: >In file included from /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/include/g++-v8/cmath:578:5: note: âstd::isfiniteâ > isfinite(_Tp __x) > ^~~~~~~~ >gmake[1]: *** [CMakeFiles/cmTC_da915.dir/build.make:66: CMakeFiles/cmTC_da915.dir/CheckSymbolExists.cxx.o] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_da915/fast] Error 2 > >File /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: >/* */ >#include <cmath> > >int main(int argc, char** argv) >{ > (void)argv; >#ifndef isfinite > return ((int*)(&isfinite))[argc]; >#else > (void)argc; > return 0; >#endif >} > >Determining if the isinf exist failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_2ce2b/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_2ce2b.dir/build.make CMakeFiles/cmTC_2ce2b.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building CXX object CMakeFiles/cmTC_2ce2b.dir/CheckSymbolExists.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DNDEBUG -std=c++11 -O2 -pipe -march=native -o CMakeFiles/cmTC_2ce2b.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function âint main(int, char**)â: >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: âisinfâ was not declared in this scope > return ((int*)(&isinf))[argc]; > ^~~~~ >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: note: suggested alternative: >In file included from /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/include/g++-v8/cmath:605:5: note: âstd::isinfâ > isinf(_Tp __x) > ^~~~~ >gmake[1]: *** [CMakeFiles/cmTC_2ce2b.dir/build.make:66: CMakeFiles/cmTC_2ce2b.dir/CheckSymbolExists.cxx.o] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_2ce2b/fast] Error 2 > >File /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: >/* */ >#include <cmath> > >int main(int argc, char** argv) >{ > (void)argv; >#ifndef isinf > return ((int*)(&isinf))[argc]; >#else > (void)argc; > return 0; >#endif >} > >Determining if the isnan exist failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_f747b/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_f747b.dir/build.make CMakeFiles/cmTC_f747b.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building CXX object CMakeFiles/cmTC_f747b.dir/CheckSymbolExists.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DNDEBUG -std=c++11 -O2 -pipe -march=native -o CMakeFiles/cmTC_f747b.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function âint main(int, char**)â: >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: âisnanâ was not declared in this scope > return ((int*)(&isnan))[argc]; > ^~~~~ >/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: note: suggested alternative: >In file included from /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/include/g++-v8/cmath:632:5: note: âstd::isnanâ > isnan(_Tp __x) > ^~~~~ >gmake[1]: *** [CMakeFiles/cmTC_f747b.dir/build.make:66: CMakeFiles/cmTC_f747b.dir/CheckSymbolExists.cxx.o] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_f747b/fast] Error 2 > >File /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: >/* */ >#include <cmath> > >int main(int argc, char** argv) >{ > (void)argv; >#ifndef isnan > return ((int*)(&isnan))[argc]; >#else > (void)argc; > return 0; >#endif >} > >Determining if the function isfinite exists failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_c54ad/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_c54ad.dir/build.make CMakeFiles/cmTC_c54ad.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building C object CMakeFiles/cmTC_c54ad.dir/CheckFunctionExists.c.o >/usr/bin/x86_64-pc-linux-gnu-gcc -DNDEBUG -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=isfinite -o CMakeFiles/cmTC_c54ad.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c >Linking C executable cmTC_c54ad >/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_c54ad.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=isfinite -Wl,-O1 -Wl,--as-needed -rdynamic CMakeFiles/cmTC_c54ad.dir/CheckFunctionExists.c.o -o cmTC_c54ad -lm >CMakeFiles/cmTC_c54ad.dir/CheckFunctionExists.c.o: In function `main': >CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `isfinite' >collect2: error: ld returned 1 exit status >gmake[1]: *** [CMakeFiles/cmTC_c54ad.dir/build.make:87: cmTC_c54ad] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_c54ad/fast] Error 2 > > >Determining if the function arc4random exists failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_71794/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_71794.dir/build.make CMakeFiles/cmTC_71794.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building C object CMakeFiles/cmTC_71794.dir/CheckFunctionExists.c.o >/usr/bin/x86_64-pc-linux-gnu-gcc -DNDEBUG -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=arc4random -o CMakeFiles/cmTC_71794.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c >Linking C executable cmTC_71794 >/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_71794.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=arc4random -Wl,-O1 -Wl,--as-needed -rdynamic CMakeFiles/cmTC_71794.dir/CheckFunctionExists.c.o -o cmTC_71794 -lm >CMakeFiles/cmTC_71794.dir/CheckFunctionExists.c.o: In function `main': >CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `arc4random' >collect2: error: ld returned 1 exit status >gmake[1]: *** [CMakeFiles/cmTC_71794.dir/build.make:87: cmTC_71794] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_71794/fast] Error 2 > > >Determining if the pthread_create exist failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_a6b75/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_a6b75.dir/build.make CMakeFiles/cmTC_a6b75.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building C object CMakeFiles/cmTC_a6b75.dir/CheckSymbolExists.c.o >/usr/bin/x86_64-pc-linux-gnu-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_a6b75.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c >Linking C executable cmTC_a6b75 >/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_a6b75.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -rdynamic CMakeFiles/cmTC_a6b75.dir/CheckSymbolExists.c.o -o cmTC_a6b75 -lm >CMakeFiles/cmTC_a6b75.dir/CheckSymbolExists.c.o: In function `main': >CheckSymbolExists.c:(.text.startup+0x3): undefined reference to `pthread_create' >collect2: error: ld returned 1 exit status >gmake[1]: *** [CMakeFiles/cmTC_a6b75.dir/build.make:87: cmTC_a6b75] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_a6b75/fast] Error 2 > >File /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c: >/* */ >#include <pthread.h> > >int main(int argc, char** argv) >{ > (void)argv; >#ifndef pthread_create > return ((int*)(&pthread_create))[argc]; >#else > (void)argc; > return 0; >#endif >} > >Determining if the function pthread_create exists in the pthreads failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp > >Run Build Command:"/usr/bin/gmake" "cmTC_09a16/fast" >/usr/bin/gmake -f CMakeFiles/cmTC_09a16.dir/build.make CMakeFiles/cmTC_09a16.dir/build >gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >Building C object CMakeFiles/cmTC_09a16.dir/CheckFunctionExists.c.o >/usr/bin/x86_64-pc-linux-gnu-gcc -DNDEBUG -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_09a16.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c >Linking C executable cmTC_09a16 >/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_09a16.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=pthread_create -Wl,-O1 -Wl,--as-needed -rdynamic CMakeFiles/cmTC_09a16.dir/CheckFunctionExists.c.o -o cmTC_09a16 -lpthreads -lm >/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lpthreads >collect2: error: ld returned 1 exit status >gmake[1]: *** [CMakeFiles/cmTC_09a16.dir/build.make:87: cmTC_09a16] Error 1 >gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp' >gmake: *** [Makefile:121: cmTC_09a16/fast] Error 2 > >
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