build.log

build.log (text/plain), 248.16 KB, created by Martin Mokrejš on 2018-09-12 08:33:20 UTC

[32;01m * [39;49;00mPackage:    dev-lang/R-3.5.1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail]
[32;01m * [39;49;00mUSE:        X abi_x86_64 amd64 cairo elibc_glibc java jpeg kernel_linux lapack nls openmp perl png prefix readline static-libs tiff tk userland_GNU
[32;01m * [39;49;00mFEATURES:   nostrip preserve-libs splitdebug
 [32;01m*[0m Using following Fortran compiler:
 [32;01m*[0m   F77: x86_64-pc-linux-gnu-gfortran
 [32;01m*[0m   FC:  x86_64-pc-linux-gnu-gfortran
 [32;01m*[0m x86_64-pc-linux-gnu-gfortran has OPENMP support
>>> Unpacking source...
>>> Unpacking R-3.5.1.tar.gz to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work
>>> Unpacking R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work
unpack R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion: file format not recognized. Ignoring.
>>> Source unpacked in /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work
>>> Preparing source in /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1 ...
 [32;01m*[0m Applying R-3.4.1-parallel.patch ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying R-3.4.1-rmath-shared.patch ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running eautoreconf in '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1' ...
 [32;01m*[0m Running autopoint --force ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running libtoolize --install --copy --force ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running aclocal -I m4 ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running autoconf -I m4 --force ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running autoheader -I m4 ...
[A[174C [34;01m[ [32;01mok[34;01m ][0m
 * Running elibtoolize in: R-3.5.1/
 *   Applying ppc64le/2.4.4 patch ...
 * Running elibtoolize in: R-3.5.1/tools/
 *   Applying portage/1.2.0 patch ...
 *   Applying sed/1.5.6 patch ...
 *   Applying as-needed/2.4.3 patch ...
>>> Source prepared.
>>> Configuring source in /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1 ...
 * econf: updating R-3.5.1/tools/config.guess with /apps/gentoo/usr/share/gnuconfig/config.guess
 * econf: updating R-3.5.1/tools/config.sub with /apps/gentoo/usr/share/gnuconfig/config.sub
./configure --prefix=/apps/gentoo/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/apps/gentoo/usr/share/man --infodir=/apps/gentoo/usr/share/info --datadir=/apps/gentoo/usr/share --sysconfdir=/apps/gentoo/etc --localstatedir=/apps/gentoo/var/lib --docdir=/apps/gentoo/usr/share/doc/R-3.5.1 --htmldir=/apps/gentoo/usr/share/doc/R-3.5.1/html --libdir=/apps/gentoo/usr/lib64 --enable-byte-compiled-packages --enable-R-shlib --disable-R-framework --with-blas=-lblas --docdir=/apps/gentoo/usr/share/doc/R-3.5.1 rdocdir=/apps/gentoo/usr/share/doc/R-3.5.1 --enable-java --enable-nls --enable-openmp --disable-R-profiling --disable-memory-profiling --enable-static --enable-R-static-lib --with-cairo --without-ICU --with-jpeglib --with-lapack --with-recommended-packages --with-libpng --with-readline --with-libtiff --with-tcltk --with-tk-config=/apps/gentoo/usr/lib64/tkConfig.sh --with-tcl-config=/apps/gentoo/usr/lib64/tclConfig.sh --with-x
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
loading site script './config.site'
loading build-specific script './config.site'
configure: WARNING: --enable-R-static-lib conflicts with --enable-R-shlib and will be ignored
checking for pwd... /apps/gentoo/bin/pwd
checking whether builddir is srcdir... yes
checking whether ln -s works... yes
checking for ar... ar
checking for a BSD-compatible install... /apps/gentoo/usr/bin/install -c
checking for sed... /apps/gentoo/bin/sed
checking for which... /apps/gentoo/usr/bin/which
checking for /apps/gentoo/usr/bin/less... /apps/gentoo/usr/bin/less
checking for gtar... /apps/gentoo/bin/gtar
checking for tex... /usr/bin/tex
checking for pdftex... /usr/bin/pdftex
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... /usr/bin/makeindex
checking for texi2any... /apps/gentoo/usr/bin/texi2any
checking whether texi2any version is at least 5.1... yes
checking for ginstall-info... no
checking for install-info... /apps/gentoo/usr/bin/install-info
checking for texi2dvi... /apps/gentoo/usr/bin/texi2dvi
checking for kpsewhich... /apps/gentoo/usr/bin/kpsewhich
checking for latex inconsolata package... missing
configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally
checking for unzip... /apps/gentoo/usr/bin/unzip
checking for zip... /apps/gentoo/usr/bin/zip
checking for gzip... /apps/gentoo/bin/gzip
checking for bzip2... /apps/gentoo/bin/bzip2
using default browser ... /apps/gentoo/usr/bin/xdg-open
checking for /apps/gentoo/usr/bin/xdg-open... /apps/gentoo/usr/bin/xdg-open
checking for working aclocal... found
checking for working autoconf... found
checking for working autoheader... found
checking for bison... bison -y
checking for notangle... false
checking for realpath... /apps/gentoo/usr/bin/realpath
checking for pkg-config... /apps/gentoo/usr/bin/pkg-config
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for grep that handles long lines and -e... /apps/gentoo/bin/grep
checking for egrep... /apps/gentoo/bin/grep -E
checking whether x86_64-pc-linux-gnu-gcc needs -traditional... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
defining F77 to be x86_64-pc-linux-gnu-gfortran
checking for x86_64-pc-linux-gnu-g77... x86_64-pc-linux-gnu-gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking whether x86_64-pc-linux-gnu-g++ -O2 -pipe -O2 -pipe -march=native -ftree-vectorize can compile C++ code... yes
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking whether __attribute__((visibility())) is supported... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -fvisibility... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -fvisibility... yes
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether we are using the GNU Objective C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether x86_64-pc-linux-gnu-g++ can compile ObjC++... no
no working ObjC++ compiler found
checking how to print strings... printf
checking for a sed that does not truncate output... (cached) /apps/gentoo/bin/sed
checking for fgrep... /apps/gentoo/bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /apps/gentoo/usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/apps/gentoo/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking the maximum length of command line arguments... 3932160
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... (cached) ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking for gawk... gawk
checking command to parse /apps/gentoo/usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sysroot... no
checking for a working dd... /apps/gentoo/bin/dd
checking how to truncate binary pipes... /apps/gentoo/bin/dd bs=4096 count=1
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for ld used by x86_64-pc-linux-gnu-g++... /apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gfortran linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for cos in -lm... yes
checking for sin in -lm... yes
checking for dlopen in -ldl... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_callback_sigcleanup exists and is declared... yes
checking whether rl_completion_matches exists and is declared... yes
checking whether rl_resize_terminal exists and is declared... yes
checking whether rl_sort_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for dlfcn.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking features.h usability... yes
checking features.h presence... yes
checking for features.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking langinfo.h usability... yes
checking langinfo.h presence... yes
checking for langinfo.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking stdalign.h usability... yes
checking stdalign.h presence... yes
checking for stdalign.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for uint64_t... yes
checking for int64_t... yes
checking for int_fast64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C99... none needed
checking for x86_64-pc-linux-gnu-gcc option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether x86_64-pc-linux-gnu-gcc supports -c -o FILE.lo... yes
checking for x86_64-pc-linux-gnu-gcc option to support OpenMP... -fopenmp
checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v
checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran...  -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0 -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../../../lib64 -L/apps/gentoo/lib/../lib64 -L/apps/gentoo/usr/lib/../lib64 -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../../../x86_64-pc-linux-gnu/lib -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../.. -L/apps/gentoo/lib -L/apps/gentoo/usr/lib -lgfortran -lm -lquadmath
checking how to get verbose linking output from x86_64-pc-linux-gnu-gcc... -v
checking for C libraries of x86_64-pc-linux-gnu-gcc...  -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0 -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../../../lib64 -L/apps/gentoo/lib/../lib64 -L/apps/gentoo/usr/lib/../lib64 -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../../../x86_64-pc-linux-gnu/lib -L/apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/8.2.0/../../.. -L/apps/gentoo/lib -L/apps/gentoo/usr/lib -lgcc_s
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether x86_64-pc-linux-gnu-gfortran appends underscores to external names... yes
checking whether x86_64-pc-linux-gnu-gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether x86_64-pc-linux-gnu-gfortran and x86_64-pc-linux-gnu-gcc agree on int and double... yes
checking whether x86_64-pc-linux-gnu-gfortran and x86_64-pc-linux-gnu-gcc agree on double complex... yes
checking for x86_64-pc-linux-gnu-gfortran option to support OpenMP... -fopenmp
checking whether x86_64-pc-linux-gnu-g++ accepts -M for generating dependencies... yes
checking for x86_64-pc-linux-gnu-g++ option to support OpenMP... -fopenmp
checking whether we can compute ObjC Make dependencies... yes, using x86_64-pc-linux-gnu-gcc -MM
checking for ObjC runtime library... -lobjc
checking for ObjC runtime style... unknown
checking whether x86_64-pc-linux-gnu-gcc accepts -fobjc-exceptions... yes
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... /apps/gentoo/usr/bin/xmkmf
checking whether x86_64-pc-linux-gnu-g++  supports C++98 features with -std=gnu++98... yes
checking whether x86_64-pc-linux-gnu-g++  supports C++11 features with -std=gnu++11... yes
checking whether x86_64-pc-linux-gnu-g++  supports C++14 features with -std=gnu++14... yes
checking whether x86_64-pc-linux-gnu-g++  supports C++17 features with -std=gnu++17... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log1pl exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking sunmath.h usability... no
checking sunmath.h presence... no
checking for sunmath.h... no
checking for cospi in -lsunmath... no
checking for atanpi... no
checking for atan2pi... no
checking for cospi... no
checking for exp10... yes
checking for pown... no
checking for sinpi... no
checking for tanpi... no
checking for __cospi... no
checking for __sinpi... no
checking for __tanpi... no
checking for fseeko... yes
checking for ftello... yes
checking for matherr... yes
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether getline exists and is declared... yes
checking whether select exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether setrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether gmtime_r exists and is declared... yes
checking whether localtime_r exists and is declared... yes
checking whether nl_langinfo exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... yes
checking whether sched_getaffinity exists and is declared... yes
checking whether utime exists and is declared... yes
checking whether utimensat exists and is declared... yes
checking for clock_gettime in -lrt... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
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checking thread.h usability... no
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checking whether thr_stksegment exists and is declared... no
checking for isnan... yes
checking whether isfinite is declared... yes
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checking whether putenv("FOO=") can unset an environment variable... no
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checking for library containing connect... none required
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checking for dpstrf_... no
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checking for ld used by GCC... /apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/apps/gentoo/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking for shared library run path origin... done
checking iconv.h usability... yes
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checking wchar.h usability... yes
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checking for X... libraries /apps/gentoo/usr/lib64, headers /apps/gentoo/usr/include
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checking for gethostbyname... yes
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checking if libtool supports shared libraries... yes
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checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
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Configuring src/extra/intl directory
checking whether make sets $(MAKE)... yes
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checking for x86_64-pc-linux-gnu-ranlib... (cached) x86_64-pc-linux-gnu-ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
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checking pthread.h usability... yes
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checking for iconv declaration... (cached) 
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... yes
checking for bison... bison
checking version of bison... 3.1, ok
checking for long long int... yes
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checking whether we are using the GNU C Library 2.1 or newer... yes
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
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checking for CFLocaleCopyCurrent... no
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
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checking for putenv... (cached) yes
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checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
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checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for CFPreferencesCopyAppValue... (cached) no
checking for CFLocaleCopyCurrent... (cached) no
checking whether included gettext is requested... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
Finished configuring src/extra/intl directory

checking whether OpenMP SIMD reduction is supported... yes
using as R_SHELL for scripts ... /apps/gentoo/bin/bash
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
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R is now configured for x86_64-pc-linux-gnu

  Source directory:          .
  Installation directory:    /apps/gentoo/usr

  C compiler:                x86_64-pc-linux-gnu-gcc  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize
  Fortran 77 compiler:       x86_64-pc-linux-gnu-gfortran  -O2 -pipe

  Default C++ compiler:      x86_64-pc-linux-gnu-g++   -O2 -pipe -O2 -pipe -march=native -ftree-vectorize
  C++98 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++98 -O2 -pipe -O2 -pipe -march=native -ftree-vectorize
  C++11 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++11 -O2 -pipe -O2 -pipe -march=native -ftree-vectorize
  C++14 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++14 -O2 -pipe -O2 -pipe -march=native -ftree-vectorize
  C++17 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++17 -O2 -pipe -O2 -pipe -march=native -ftree-vectorize
  Fortran 90/95 compiler:    x86_64-pc-linux-gnu-gfortran -O2 -pipe
  Obj-C compiler:	     x86_64-pc-linux-gnu-gcc -g -O2 -fobjc-exceptions

  Interfaces supported:      X11, tcltk
  External libraries:        readline, BLAS(generic), LAPACK(generic), curl
  Additional capabilities:   PNG, JPEG, TIFF, NLS, cairo
  Options enabled:           shared R library

  Capabilities skipped:      ICU
  Options not enabled:       shared BLAS, R profiling, memory profiling

  Recommended packages:      yes

configure: WARNING: you cannot build PDF versions of vignettes and help pages
configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally
>>> Source configured.
>>> Compiling source in /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1 ...
make -j1 AR=x86_64-pc-linux-gnu-ar 
make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/m4'
make[1]: Nothing to be done for 'R'.
make[1]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/m4'
make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/tools'
make[1]: Nothing to be done for 'R'.
make[1]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/tools'
make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/doc'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/doc/html'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/doc/html'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/doc/manual'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/doc/manual'
make[1]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/doc'
make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/etc'
make[1]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/etc'
make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/share'
make[1]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/share'
make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/scripts'
creating src/scripts/R.fe
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/scripts'
mkdir -p -- ../../bin
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/scripts'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/scripts'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/include'
mkdir -p -- ../../include
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/include/R_ext'
mkdir -p -- ../../../include/R_ext
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/include/R_ext'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/include'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra/tre'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra/tre'
making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra/tre'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra/tre'
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c regcomp.c -o regcomp.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c regerror.c -o regerror.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c regexec.c -o regexec.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-ast.c -o tre-ast.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-compile.c -o tre-compile.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-mem.c -o tre-mem.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-parse.c -o tre-parse.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c tre-stack.c -o tre-stack.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -fvisibility=hidden -c xmalloc.c -o xmalloc.o
x86_64-pc-linux-gnu-ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
x86_64-pc-linux-gnu-ranlib libtre.a
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra/tre'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra/tre'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/extra'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/appl'
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/appl'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c integrate.c -o integrate.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c interv.c -o interv.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c maxcol.c -o maxcol.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c optim.c -o optim.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pretty.c -o pretty.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c uncmin.c -o uncmin.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dchdc.f -o dchdc.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dpbfa.f -o dpbfa.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dpbsl.f -o dpbsl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dpoco.f -o dpoco.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dpodi.f -o dpodi.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dpofa.f -o dpofa.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dposl.f -o dposl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dqrdc.f -o dqrdc.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dqrdc2.f -o dqrdc2.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dqrls.f -o dqrls.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dqrsl.f -o dqrsl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dqrutl.f -o dqrutl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dsvdc.f -o dsvdc.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dtrco.f -o dtrco.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c dtrsl.f -o dtrsl.o
x86_64-pc-linux-gnu-ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o 
x86_64-pc-linux-gnu-ranlib libappl.a
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/appl'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/appl'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/nmath'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c mlutils.c -o mlutils.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c d1mach.c -o d1mach.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c i1mach.c -o i1mach.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fmax2.c -o fmax2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fmin2.c -o fmin2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fprec.c -o fprec.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fround.c -o fround.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ftrunc.c -o ftrunc.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sign.c -o sign.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fsign.c -o fsign.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c imax2.c -o imax2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c imin2.c -o imin2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chebyshev.c -o chebyshev.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c log1p.c -o log1p.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lgammacor.c -o lgammacor.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gammalims.c -o gammalims.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c stirlerr.c -o stirlerr.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bd0.c -o bd0.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gamma.c -o gamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lgamma.c -o lgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gamma_cody.c -o gamma_cody.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c beta.c -o beta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lbeta.c -o lbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c polygamma.c -o polygamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cospi.c -o cospi.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bessel_i.c -o bessel_i.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bessel_j.c -o bessel_j.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bessel_k.c -o bessel_k.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bessel_y.c -o bessel_y.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c choose.c -o choose.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c snorm.c -o snorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sexp.c -o sexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dgamma.c -o dgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pgamma.c -o pgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qgamma.c -o qgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rgamma.c -o rgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dbeta.c -o dbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pbeta.c -o pbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qbeta.c -o qbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rbeta.c -o rbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dunif.c -o dunif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c punif.c -o punif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qunif.c -o qunif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c runif.c -o runif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dnorm.c -o dnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pnorm.c -o pnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qnorm.c -o qnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rnorm.c -o rnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dlnorm.c -o dlnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plnorm.c -o plnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qlnorm.c -o qlnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rlnorm.c -o rlnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c df.c -o df.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pf.c -o pf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qf.c -o qf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rf.c -o rf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dnf.c -o dnf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dt.c -o dt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pt.c -o pt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qt.c -o qt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rt.c -o rt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dnt.c -o dnt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dchisq.c -o dchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pchisq.c -o pchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qchisq.c -o qchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rchisq.c -o rchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rnchisq.c -o rnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dbinom.c -o dbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pbinom.c -o pbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qbinom.c -o qbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rbinom.c -o rbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rmultinom.c -o rmultinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dcauchy.c -o dcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pcauchy.c -o pcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qcauchy.c -o qcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rcauchy.c -o rcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dexp.c -o dexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pexp.c -o pexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qexp.c -o qexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rexp.c -o rexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dgeom.c -o dgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pgeom.c -o pgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qgeom.c -o qgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rgeom.c -o rgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dhyper.c -o dhyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c phyper.c -o phyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qhyper.c -o qhyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rhyper.c -o rhyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dnbinom.c -o dnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pnbinom.c -o pnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qnbinom.c -o qnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rnbinom.c -o rnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dpois.c -o dpois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ppois.c -o ppois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qpois.c -o qpois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rpois.c -o rpois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dweibull.c -o dweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pweibull.c -o pweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qweibull.c -o qweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rweibull.c -o rweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dlogis.c -o dlogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plogis.c -o plogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qlogis.c -o qlogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rlogis.c -o rlogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dnchisq.c -o dnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pnchisq.c -o pnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qnchisq.c -o qnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dnbeta.c -o dnbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pnbeta.c -o pnbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qnbeta.c -o qnbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pnf.c -o pnf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pnt.c -o pnt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qnf.c -o qnf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qnt.c -o qnt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ptukey.c -o ptukey.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qtukey.c -o qtukey.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c toms708.c -o toms708.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c wilcox.c -o wilcox.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c signrank.c -o signrank.o
x86_64-pc-linux-gnu-ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
x86_64-pc-linux-gnu-ranlib libnmath.a
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/nmath'
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make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/unix'
config.status: creating src/unix/Makefile
making Rembedded.d from Rembedded.c
making dynload.d from dynload.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making sys-std.d from sys-std.c
making X11.d from X11.c
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/unix'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Rembedded.c -o Rembedded.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dynload.c -o dynload.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c system.c -o system.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sys-unix.c -o sys-unix.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sys-std.c -o sys-std.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c X11.c -o X11.o
x86_64-pc-linux-gnu-ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
x86_64-pc-linux-gnu-ranlib libunix.a
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/unix'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/unix'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/apps/gentoo/usr/include  -DHAVE_CONFIG_H    -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -DR_HOME='"/apps/gentoo/usr/lib64/R"' \
  -o Rscript ./Rscript.c
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/unix'
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make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
config.status: creating src/main/Makefile
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making altrep.d from altrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making radixsort.d from radixsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making times.d from times.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c CommandLineArgs.c -o CommandLineArgs.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Rdynload.c -o Rdynload.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Renviron.c -o Renviron.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c RNG.c -o RNG.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agrep.c -o agrep.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c altrep.c -o altrep.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c apply.c -o apply.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c arithmetic.c -o arithmetic.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c array.c -o array.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c attrib.c -o attrib.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bind.c -o bind.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c builtin.c -o builtin.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c character.c -o character.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coerce.c -o coerce.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c colors.c -o colors.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c complex.c -o complex.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c connections.c -o connections.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c context.c -o context.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cum.c -o cum.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dcf.c -o dcf.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c datetime.c -o datetime.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c debug.c -o debug.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c deparse.c -o deparse.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devices.c -o devices.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dotcode.c -o dotcode.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dounzip.c -o dounzip.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dstruct.c -o dstruct.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c duplicate.c -o duplicate.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c edit.c -o edit.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c engine.c -o engine.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c envir.c -o envir.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c errors.c -o errors.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c eval.c -o eval.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c format.c -o format.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gevents.c -o gevents.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gram.c -o gram.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gram-ex.c -o gram-ex.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c graphics.c -o graphics.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c grep.c -o grep.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c identical.c -o identical.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c inlined.c -o inlined.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c inspect.c -o inspect.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c internet.c -o internet.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c iosupport.c -o iosupport.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lapack.c -o lapack.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c list.c -o list.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c localecharset.c -o localecharset.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c logic.c -o logic.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c main.c -o main.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c mapply.c -o mapply.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c match.c -o match.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c memory.c -o memory.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c names.c -o names.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c objects.c -o objects.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c options.c -o options.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c paste.c -o paste.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c platform.c -o platform.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plot.c -o plot.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plot3d.c -o plot3d.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plotmath.c -o plotmath.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c print.c -o print.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c printarray.c -o printarray.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c printvector.c -o printvector.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c printutils.c -o printutils.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c qsort.c -o qsort.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c radixsort.c -o radixsort.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c random.c -o random.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c raw.c -o raw.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c registration.c -o registration.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c relop.c -o relop.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rlocale.c -o rlocale.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c saveload.c -o saveload.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c scan.c -o scan.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c seq.c -o seq.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c serialize.c -o serialize.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sort.c -o sort.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c source.c -o source.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c split.c -o split.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sprintf.c -o sprintf.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c startup.c -o startup.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c subassign.c -o subassign.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c subscript.c -o subscript.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c subset.c -o subset.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c summary.c -o summary.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sysutils.c -o sysutils.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c times.c -o times.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c unique.c -o unique.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c util.c -o util.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c version.c -o version.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c g_alab_her.c -o g_alab_her.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c g_cntrlify.c -o g_cntrlify.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c g_fontdb.c -o g_fontdb.o
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c g_her_glyph.c -o g_her_glyph.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -O2 -pipe  -c xxxpr.f -o xxxpr.o
x86_64-pc-linux-gnu-gcc -shared -fopenmp -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib  -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o   `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a    -lblas -lgfortran -lm -lquadmath   -lreadline  -lpcre2-8 -lpcre -llzma -lbz2 -lz -lrt -ldl -lm  
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
mkdir -p -- /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/bin/exec
mkdir -p -- /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
x86_64-pc-linux-gnu-gcc -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Rmain.c -o Rmain.o
x86_64-pc-linux-gnu-gcc -Wl,--export-dynamic -fopenmp  -L"../../lib" -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o R.bin Rmain.o  -lR 
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/main'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/internet'
making Rhttpd.d from Rhttpd.c
making Rsock.d from Rsock.c
making internet.d from internet.c
making libcurl.d from libcurl.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
making sock.d from sock.c
making sockconn.d from sockconn.c
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/internet'
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c Rsock.c -o Rsock.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c internet.c -o internet.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c libcurl.c -o libcurl.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c nanoftp.c -o nanoftp.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c nanohttp.c -o nanohttp.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c sock.c -o sock.o
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize   -fvisibility=hidden -c sockconn.c -o sockconn.o
x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl -lssl -lcrypto -lssl -lcrypto -lz -lR  
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/internet'
mkdir -p -- /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/modules
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/internet'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/internet'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/internet'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/lapack'
making Lapack.d from Lapack.c
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/lapack'
x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Lapack.c -o Lapack.o
x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o lapack.so  Lapack.o  -lR  -lreflapack -lblas -lgfortran -lm -lquadmath
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/lapack'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/lapack'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/lapack'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/lapack'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/X11'
making devX11.d from devX11.c
making rotated.d from rotated.c
making rbitmap.d from rbitmap.c
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/X11'
x86_64-pc-linux-gnu-gcc -I/apps/gentoo/usr/include/libpng16  -I. -I../../../src/include -I../../../src/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/harfbuzz -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/fribidi -I/apps/gentoo/usr/include/cairo -I/apps/gentoo/usr/include/glib-2.0 -I/apps/gentoo/usr/lib64/glib-2.0/include -I/apps/gentoo/usr/include/pixman-1 -I/apps/gentoo/usr/include/uuid -I/apps/gentoo/usr/include/freetype2 -I/apps/gentoo/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devX11.c -o devX11.o
x86_64-pc-linux-gnu-gcc -I/apps/gentoo/usr/include/libpng16  -I. -I../../../src/include -I../../../src/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/harfbuzz -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/fribidi -I/apps/gentoo/usr/include/cairo -I/apps/gentoo/usr/include/glib-2.0 -I/apps/gentoo/usr/lib64/glib-2.0/include -I/apps/gentoo/usr/include/pixman-1 -I/apps/gentoo/usr/include/uuid -I/apps/gentoo/usr/include/freetype2 -I/apps/gentoo/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rotated.c -o rotated.o
x86_64-pc-linux-gnu-gcc -I/apps/gentoo/usr/include/libpng16  -I. -I../../../src/include -I../../../src/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/harfbuzz -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/fribidi -I/apps/gentoo/usr/include/cairo -I/apps/gentoo/usr/include/glib-2.0 -I/apps/gentoo/usr/lib64/glib-2.0/include -I/apps/gentoo/usr/include/pixman-1 -I/apps/gentoo/usr/include/uuid -I/apps/gentoo/usr/include/freetype2 -I/apps/gentoo/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rbitmap.c -o rbitmap.o
x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -L/apps/gentoo/usr/lib64 -lX11 -lXt -lXmu  -lR -lm 
x86_64-pc-linux-gnu-gcc -I/apps/gentoo/usr/include/libpng16  -I. -I../../../src/include -I../../../src/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/harfbuzz -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/fribidi -I/apps/gentoo/usr/include/cairo -I/apps/gentoo/usr/include/glib-2.0 -I/apps/gentoo/usr/lib64/glib-2.0/include -I/apps/gentoo/usr/include/pixman-1 -I/apps/gentoo/usr/include/uuid -I/apps/gentoo/usr/include/freetype2 -I/apps/gentoo/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dataentry.c -o dataentry.o
x86_64-pc-linux-gnu-gcc -shared -L"../../../lib" -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -L/apps/gentoo/usr/lib64 -lX11 -lXt -lXmu  -lR -lm 
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/X11'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/X11'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/X11'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules/X11'
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/modules'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library'
mkdir -p -- ../../library
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/profile'
building system startup profile
mkdir -p -- ../../../library/base/R
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/profile'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/translations'
building package 'translations'
mkdir -p -- ../../../library/translations
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/translations'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/translations'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/translations'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/base'
building package 'base'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/base'
mkdir -p -- ../../../library/base/demo
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/base'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/base'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
building package 'tools'
mkdir -p -- ../../../library/tools
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
mkdir -p -- ../../../library/tools/R
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools/src'
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
making signals.d from signals.c
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
making gramLatex.d from gramLatex.c
making gramRd.d from gramRd.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c text.c -o text.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Rmd5.c -o Rmd5.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c md5.c -o md5.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c signals.c -o signals.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c install.c -o install.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c getfmts.c -o getfmts.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c http.c -o http.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gramLatex.c -o gramLatex.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gramRd.c -o gramRd.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools/src'
mkdir -p -- ../../../../library/tools/libs
make[6]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools/src'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools/src'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
installing 'sysdata.rda'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/compiler'
building package 'compiler'
mkdir -p -- ../../../library/compiler
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/compiler'
mkdir -p -- ../../../library/compiler/R
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/compiler'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/compiler'
byte-compiling package 'compiler'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/compiler'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/compiler'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/base'
byte-compiling package 'base'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/base'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
byte-compiling package 'tools'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tools'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
building package 'utils'
mkdir -p -- ../../../library/utils
mkdir -p -- ../../../library/utils/doc
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
mkdir -p -- ../../../library/utils/R
mkdir -p -- ../../../library/utils/Sweave
mkdir -p -- ../../../library/utils/misc
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils/src'
making init.d from init.c
making io.d from io.c
making size.d from size.c
making sock.d from sock.c
making stubs.d from stubs.c
making utils.d from utils.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c io.c -o io.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c size.c -o size.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sock.c -o sock.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c stubs.c -o stubs.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c utils.c -o utils.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils/src'
mkdir -p -- ../../../../library/utils/libs
make[6]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils/src'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils/src'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
installing 'sysdata.rda'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
byte-compiling package 'utils'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/utils'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
building package 'grDevices'
mkdir -p -- ../../../library/grDevices
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
mkdir -p -- ../../../library/grDevices/R
mkdir -p -- ../../../library/grDevices/afm
mkdir -p -- ../../../library/grDevices/enc
mkdir -p -- ../../../library/grDevices/icc
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src'
making axis_scales.d from axis_scales.c
making chull.d from chull.c
making devices.d from devices.c
making init.d from init.c
making stubs.d from stubs.c
making colors.d from colors.c
making devCairo.d from devCairo.c
making devPicTeX.d from devPicTeX.c
making devPS.d from devPS.c
making devQuartz.d from devQuartz.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c axis_scales.c -o axis_scales.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chull.c -o chull.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devices.c -o devices.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c stubs.c -o stubs.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c colors.c -o colors.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devCairo.c -o devCairo.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devPicTeX.c -o devPicTeX.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devPS.c -o devPS.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c devQuartz.c -o devQuartz.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src'
mkdir -p -- ../../../../library/grDevices/libs
make[7]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src/cairo'
making cairoBM.d from cairoBM.c
make[8]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src/cairo'
make[9]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src/cairo'
x86_64-pc-linux-gnu-gcc -I. -I../../../../../src/include -I../../../../../src/include -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/harfbuzz -I/apps/gentoo/usr/include/pango-1.0 -I/apps/gentoo/usr/include/fribidi -I/apps/gentoo/usr/include/cairo -I/apps/gentoo/usr/include/glib-2.0 -I/apps/gentoo/usr/lib64/glib-2.0/include -I/apps/gentoo/usr/include/pixman-1 -I/apps/gentoo/usr/include/uuid -I/apps/gentoo/usr/include/freetype2 -I/apps/gentoo/usr/include/libpng16 -I../../../../../src/modules/X11  -DHAVE_CONFIG_H   -fopenmp -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cairoBM.c -o cairoBM.o
x86_64-pc-linux-gnu-gcc -shared -L"../../../../../lib" -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -L"../../../../../lib" -lR -lm 
make[9]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src/cairo'
make[8]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src/cairo'
make[7]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src/cairo'
make[6]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices/src'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
byte-compiling package 'grDevices'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grDevices'
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make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
building package 'graphics'
mkdir -p -- ../../../library/graphics
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
mkdir -p -- ../../../library/graphics/R
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics/src'
making init.d from init.c
making base.d from base.c
making graphics.d from graphics.c
making par.d from par.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making stem.d from stem.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c base.c -o base.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c graphics.c -o graphics.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c par.c -o par.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plot.c -o plot.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c plot3d.c -o plot3d.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c stem.c -o stem.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics/src'
mkdir -p -- ../../../../library/graphics/libs
make[6]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics/src'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics/src'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
byte-compiling package 'graphics'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/graphics'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
building package 'stats'
mkdir -p -- ../../../library/stats
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
mkdir -p -- ../../../library/stats/R
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats/src'
making init.d from init.c
making kmeans.d from kmeans.c
making ansari.d from ansari.c
making bandwidths.d from bandwidths.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making line.d from line.c
making smooth.d from smooth.c
making prho.d from prho.c
making swilk.d from swilk.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
making monoSpl.d from monoSpl.c
making isoreg.d from isoreg.c
making Srunmed.d from Srunmed.c
making dblcen.d from dblcen.c
making distance.d from distance.c
making hclust-utils.d from hclust-utils.c
making nls.d from nls.c
making rWishart.d from rWishart.c
making HoltWinters.d from HoltWinters.c
making PPsum.d from PPsum.c
making arima.d from arima.c
making burg.d from burg.c
making filter.d from filter.c
making mAR.d from mAR.c
making pacf.d from pacf.c
making starma.d from starma.c
making port.d from port.c
making family.d from family.c
making sbart.d from sbart.c
making approx.d from approx.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making massdist.d from massdist.c
making splines.d from splines.c
making lm.d from lm.c
making complete_cases.d from complete_cases.c
making cov.d from cov.c
making deriv.d from deriv.c
making fft.d from fft.c
making fourier.d from fourier.c
making model.d from model.c
making optim.d from optim.c
making optimize.d from optimize.c
making integrate.d from integrate.c
making random.d from random.c
making distn.d from distn.c
making zeroin.d from zeroin.c
making rcont.d from rcont.c
making influence.d from influence.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c kmeans.c -o kmeans.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ansari.c -o ansari.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c bandwidths.c -o bandwidths.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chisqsim.c -o chisqsim.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c d2x2xk.c -o d2x2xk.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fexact.c -o fexact.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c kendall.c -o kendall.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ks.c -o ks.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c line.c -o line.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c smooth.c -o smooth.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c prho.c -o prho.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c swilk.c -o swilk.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ksmooth.c -o ksmooth.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c loessc.c -o loessc.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c monoSpl.c -o monoSpl.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c isoreg.c -o isoreg.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Srunmed.c -o Srunmed.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dblcen.c -o dblcen.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c distance.c -o distance.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c hclust-utils.c -o hclust-utils.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c nls.c -o nls.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rWishart.c -o rWishart.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c HoltWinters.c -o HoltWinters.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c PPsum.c -o PPsum.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c arima.c -o arima.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c burg.c -o burg.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c filter.c -o filter.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c mAR.c -o mAR.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pacf.c -o pacf.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c starma.c -o starma.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c port.c -o port.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c family.c -o family.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sbart.c -o sbart.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c approx.c -o approx.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c loglin.c -o loglin.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lowess.c -o lowess.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c massdist.c -o massdist.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c splines.c -o splines.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lm.c -o lm.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c complete_cases.c -o complete_cases.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cov.c -o cov.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c deriv.c -o deriv.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fft.c -o fft.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fourier.c -o fourier.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c model.c -o model.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c optim.c -o optim.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c optimize.c -o optimize.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c integrate.c -o integrate.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c random.c -o random.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c distn.c -o distn.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c zeroin.c -o zeroin.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rcont.c -o rcont.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c influence.c -o influence.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c bsplvd.f -o bsplvd.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c bvalue.f -o bvalue.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c bvalus.f -o bvalus.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c loessf.f -o loessf.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c ppr.f -o ppr.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c qsbart.f -o qsbart.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c sgram.f -o sgram.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c sinerp.f -o sinerp.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c sslvrg.f -o sslvrg.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c stxwx.f -o stxwx.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c hclust.f -o hclust.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c kmns.f -o kmns.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c eureka.f -o eureka.o
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c stl.f -o stl.o
x86_64-pc-linux-gnu-gfortran -fpic  -O2 -pipe -msse2 -mfpmath=sse -c portsrc.f -o portsrc.o
[01m[Kportsrc.f:2291:15:[m[K

       DO 30 IR = 1, M
                                                                        [32m[K2[m[K
          IPNTR(IR+1) = IPNTR(IR) + IWA(IR)
               [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
[01m[Kportsrc.f:2299:21:[m[K

[01m[Kportsrc.f:2297:72:[m[K

       DO 60 JCOL = 1, N
                                                                        [32m[K2[m[K
[01m[Kportsrc.f:2299:21:[m[K

          JPU = JPNTR(JCOL+1) - 1
                     [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
[01m[Kportsrc.f:2690:15:[m[K

       DO 30 J = 1, N
                                                                        [32m[K2[m[K
          JPNTR(J+1) = JPNTR(J) + IWA(J)
               [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
[01m[Kportsrc.f:5780:21:[m[K

[01m[Kportsrc.f:5773:72:[m[K

       DO 80 JCOL = 2, N
                                                                        [32m[K2[m[K
[01m[Kportsrc.f:5780:21:[m[K

          JPL = JPNTR(JCOL)
                     [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
[01m[Kportsrc.f:5781:21:[m[K

[01m[Kportsrc.f:5773:72:[m[K

       DO 80 JCOL = 2, N
                                                                        [32m[K2[m[K
[01m[Kportsrc.f:5781:21:[m[K

          JPU = JPNTR(JCOL+1) - 1
                     [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (3 > 1) in loop beginning at (2)
[01m[Kportsrc.f:6390:34:[m[K

       DO 20 IR = 1, M
                                                                        [32m[K2[m[K
          MAXLST = MAXLST + (IPNTR(IR+1) - IPNTR(IR))**2
                                  [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
[01m[Kportsrc.f:11119:21:[m[K

[01m[Kportsrc.f:11117:72:[m[K

       DO 70 J = 1, N
                                                                        [32m[K2[m[K
[01m[Kportsrc.f:11119:21:[m[K

          JPU = JPNTR(J+1) - 1
                     [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
[01m[Kportsrc.f:11147:36:[m[K

       DO 80 I = 1, M
                                                                        [32m[K2[m[K
          MINGRP = MAX0(MINGRP,IPNTR(I+1)-IPNTR(I))
                                    [01;35m[K1[m[K
[01;35m[KWarning:[m[K Array reference at (1) out of bounds (2 > 1) in loop beginning at (2)
x86_64-pc-linux-gnu-gfortran  -fvisibility=hidden -fpic  -O2 -pipe  -c lminfl.f -o lminfl.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -lreflapack -lblas -lgfortran -lm -lquadmath -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats/src'
mkdir -p -- ../../../../library/stats/libs
make[6]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats/src'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats/src'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
byte-compiling package 'stats'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/datasets'
building package 'datasets'
mkdir -p -- ../../../library/datasets
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/datasets'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/datasets'
mkdir -p -- ../../../library/datasets/data
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/datasets'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
building package 'methods'
mkdir -p -- ../../../library/methods
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
mkdir -p -- ../../../library/methods/R
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods/src'
making do_substitute_direct.d from do_substitute_direct.c
making init.d from init.c
making methods_list_dispatch.d from methods_list_dispatch.c
making slot.d from slot.c
making class_support.d from class_support.c
making tests.d from tests.c
making utils.d from utils.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c do_substitute_direct.c -o do_substitute_direct.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c methods_list_dispatch.c -o methods_list_dispatch.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c slot.c -o slot.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c class_support.c -o class_support.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c tests.c -o tests.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c utils.c -o utils.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods/src'
mkdir -p -- ../../../../library/methods/libs
make[6]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods/src'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods/src'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
byte-compiling 'methods'
initializing class and method definitions ... done
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/methods'
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grid'
building package 'grid'
mkdir -p -- ../../../library/grid
mkdir -p -- ../../../library/grid/doc
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grid'
mkdir -p -- ../../../library/grid/R
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make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grid'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grid/src'
making gpar.d from gpar.c
making grid.d from grid.c
making just.d from just.c
making layout.d from layout.c
making matrix.d from matrix.c
making register.d from register.c
making state.d from state.c
making unit.d from unit.c
making util.d from util.c
making viewport.d from viewport.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gpar.c -o gpar.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c grid.c -o grid.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c just.c -o just.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c layout.c -o layout.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c matrix.c -o matrix.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c register.c -o register.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c state.c -o state.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c unit.c -o unit.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c util.c -o util.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c viewport.c -o viewport.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/grid/src'
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byte-compiling package 'grid'
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make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/splines'
building package 'splines'
mkdir -p -- ../../../library/splines
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/splines'
mkdir -p -- ../../../library/splines/R
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make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/splines'
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/splines/src'
making splines.d from splines.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c splines.c -o splines.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o splines.so splines.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/splines/src'
mkdir -p -- ../../../../library/splines/libs
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byte-compiling package 'splines'
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make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats4'
building package 'stats4'
mkdir -p -- ../../../library/stats4
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/stats4'
mkdir -p -- ../../../library/stats4/R
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byte-compiling package 'stats4'
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make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tcltk'
building package 'tcltk'
mkdir -p -- ../../../library/tcltk/R
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tcltk'
mkdir -p -- ../../../library/tcltk/exec
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make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tcltk/src'
making init.d from init.c
making tcltk.d from tcltk.c
making tcltk_unix.d from tcltk_unix.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c tcltk.c -o tcltk.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include -I/apps/gentoo/usr/include    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c tcltk_unix.c -o tcltk_unix.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o tcltk.so init.o tcltk.o tcltk_unix.o -ltcl8.6 -ltk8.6 -L/apps/gentoo/usr/lib64 -lX11 -lm -L../../../../lib -lR
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/tcltk/src'
mkdir -p -- ../../../../library/tcltk/libs
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byte-compiling package 'tcltk'
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make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/parallel'
building package 'parallel'
mkdir -p -- ../../../library/parallel
mkdir -p -- ../../../library/parallel/doc
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/parallel'
mkdir -p -- ../../../library/parallel/R
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make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/parallel/src'
making init.d from init.c
making rngstream.d from rngstream.c
making fork.d from fork.c
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c rngstream.c -o rngstream.o
x86_64-pc-linux-gnu-gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c fork.c -o fork.o
x86_64-pc-linux-gnu-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR
make[6]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/parallel/src'
mkdir -p -- ../../../../library/parallel/libs
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byte-compiling package 'parallel'
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installing parsed NAMESPACE files
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you should 'make docs' now ...
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creating doc/NEWS
'pdflatex' is needed to make NEWS.pdf but is missing on your system.
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make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library'
installing parsed Rd
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library'
  base
  stats
  utils
  methods
  graphics
  grDevices
  datasets
  grid
  tools
  tcltk
  splines
  stats4
  compiler
  parallel
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building/updating package metadata ...
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writing package indices
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make[1]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/Recommended'
make[2]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/Recommended'
begin installing recommended package MASS
* installing *source* package 'MASS' ...
** package 'MASS' successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/Rtmpky0nzr/R.INSTALLcc433557367/MASS/src'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c MASS.c -o MASS.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lqs.c -o lqs.o
x86_64-pc-linux-gnu-gcc -shared -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o MASS.so MASS.o lqs.o -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -lR
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/Rtmpky0nzr/R.INSTALLcc433557367/MASS/src'
installing to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/library/MASS/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (MASS)
begin installing recommended package lattice
* installing *source* package 'lattice' ...
** package 'lattice' successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpbT9PzP/R.INSTALLe28749cdd60/lattice/src'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c threeDplot.c -o threeDplot.o
x86_64-pc-linux-gnu-gcc -shared -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o lattice.so init.o threeDplot.o -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -lR
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpbT9PzP/R.INSTALLe28749cdd60/lattice/src'
installing to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/library/lattice/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (lattice)
begin installing recommended package Matrix
* installing *source* package 'Matrix' ...
** package 'Matrix' successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c CHMfactor.c -o CHMfactor.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Csparse.c -o Csparse.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c TMatrix_as.c -o TMatrix_as.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Tsparse.c -o Tsparse.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c Mutils.c -o Mutils.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chm_common.c -o chm_common.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cs.c -o cs.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cs_utils.c -o cs_utils.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dense.c -o dense.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dgCMatrix.c -o dgCMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dgTMatrix.c -o dgTMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dgeMatrix.c -o dgeMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dpoMatrix.c -o dpoMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dppMatrix.c -o dppMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dsCMatrix.c -o dsCMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dsyMatrix.c -o dsyMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dspMatrix.c -o dspMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dtCMatrix.c -o dtCMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dtTMatrix.c -o dtTMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dtrMatrix.c -o dtrMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dtpMatrix.c -o dtpMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c factorizations.c -o factorizations.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ldense.c -o ldense.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c lgCMatrix.c -o lgCMatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c sparseQR.c -o sparseQR.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c abIndex.c -o abIndex.o
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD'
( cd Lib ; make clean )
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD/Lib'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD/Lib'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD'
( cd Source ; make clean )
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD/Source'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD/Source'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD'
( cd Source ; make clean )
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD/Source'
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD/Source'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/SuiteSparse_config'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/SuiteSparse_config'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD'
( cd Lib ; make -f "/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/etc/Makeconf" -f Makefile )
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD/Lib'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_aat.c -o cholmod_aat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_add.c -o cholmod_add.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_band.c -o cholmod_band.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_common.c -o cholmod_common.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_complex.c -o cholmod_complex.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_copy.c -o cholmod_copy.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_dense.c -o cholmod_dense.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_error.c -o cholmod_error.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_factor.c -o cholmod_factor.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_memory.c -o cholmod_memory.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_sparse.c -o cholmod_sparse.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_transpose.c -o cholmod_transpose.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_triplet.c -o cholmod_triplet.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Core/cholmod_version.c -o cholmod_version.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Check/cholmod_check.c -o cholmod_check.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Check/cholmod_read.c -o cholmod_read.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Check/cholmod_write.c -o cholmod_write.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Modify/cholmod_updown.c -o cholmod_updown.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_aat.c -o cholmod_l_aat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_add.c -o cholmod_l_add.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_band.c -o cholmod_l_band.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_common.c -o cholmod_l_common.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_complex.c -o cholmod_l_complex.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_copy.c -o cholmod_l_copy.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_dense.c -o cholmod_l_dense.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_error.c -o cholmod_l_error.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_factor.c -o cholmod_l_factor.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_memory.c -o cholmod_l_memory.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_sparse.c -o cholmod_l_sparse.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_transpose.c -o cholmod_l_transpose.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_triplet.c -o cholmod_l_triplet.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Core/cholmod_version.c -o cholmod_l_version.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Check/cholmod_check.c -o cholmod_l_check.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Check/cholmod_read.c -o cholmod_l_read.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Check/cholmod_write.c -o cholmod_l_write.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Modify/cholmod_updown.c -o cholmod_l_updown.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -DDLONG -c  ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o
x86_64-pc-linux-gnu-ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o  cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o 
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD/Lib'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/CHOLMOD'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD'
( cd Source ; make -f "/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/etc/Makeconf" -f Makefile lib )
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD/Source'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c colamd_global.c -o colamd_global.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c colamd.c -o colamd.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c colamd.c -o colamd_l.o
x86_64-pc-linux-gnu-ar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD/Source'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/COLAMD'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD'
( cd Source ; make -f "/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/etc/Makeconf" -f Makefile lib )
make[5]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD/Source'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_1.c -o amd_i_1.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_1.c -o amd_l_1.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_2.c -o amd_i_2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_2.c -o amd_l_2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_order.c -o amd_i_order.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_order.c -o amd_l_order.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_control.c -o amd_i_control.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_control.c -o amd_l_control.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_info.c -o amd_i_info.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_info.c -o amd_l_info.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDINT -c amd_global.c -o amd_i_global.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -I../Include -DDLONG -c amd_global.c -o amd_l_global.o
x86_64-pc-linux-gnu-ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o 
make[5]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD/Source'
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/AMD'
make[4]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/SuiteSparse_config'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG -DNTIMER     -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c SuiteSparse_config.c -o SuiteSparse_config.o
x86_64-pc-linux-gnu-ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o
make[4]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src/SuiteSparse_config'
x86_64-pc-linux-gnu-gcc -shared -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -lreflapack -lblas -lgfortran -lm -lquadmath -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -lR
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpzptNk9/R.INSTALLec12120309d/Matrix/src'
installing to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/library/Matrix/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'chol2inv' from 'base' in package 'Matrix'
    (from the saved implicit definition)
Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix'
Creating a generic function for 'diag' from package 'base' in package 'Matrix'
Creating a generic function for 'drop' from package 'base' in package 'Matrix'
Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix'
Creating a generic function for 'unname' from package 'base' in package 'Matrix'
Creating a generic function for 'norm' from package 'base' in package 'Matrix'
Creating a generic function for 'rcond' from 'base' in package 'Matrix'
    (from the saved implicit definition)
Creating a generic function for 'rcond' from package 'base' in package 'Matrix'
in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc"
Creating a generic function for 'colSums' from package 'base' in package 'Matrix'
Creating a generic function for 'colMeans' from package 'base' in package 'Matrix'
Creating a generic function for 'rowSums' from package 'base' in package 'Matrix'
Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix'
in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix'
Creating a generic function for 'diag<-' from package 'base' in package 'Matrix'
Creating a generic function for 'crossprod' from package 'base' in package 'Matrix'
Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix'
Creating a generic function for 'which' from package 'base' in package 'Matrix'
in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM"
in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph"
in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph"
in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL"
in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL"
in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph"
in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL"
in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL"
Creating a generic function for 'qr.R' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix'
Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix'
** help
*** installing help indices
** building package indices
Loading required package: Matrix
** installing vignettes
** testing if installed package can be loaded
* DONE (Matrix)
begin installing recommended package nlme
* installing *source* package 'nlme' ...
** package 'nlme' successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/Rtmpi0qr93/R.INSTALL14c9228c4798/nlme/src'
x86_64-pc-linux-gnu-gfortran   -fpic  -O2 -pipe  -c chol.f -o chol.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c corStruct.c -o corStruct.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gnls.c -o gnls.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c matrix.c -o matrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c nlOptimizer.c -o nlOptimizer.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c nlme.c -o nlme.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c nlmefit.c -o nlmefit.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pdMat.c -o pdMat.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG     -fvisibility=hidden -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pythag.c -o pythag.o
x86_64-pc-linux-gnu-gfortran   -fpic  -O2 -pipe  -c rs.f -o rs.o
x86_64-pc-linux-gnu-gcc -shared -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -lgfortran -lm -lquadmath -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -lR
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/Rtmpi0qr93/R.INSTALL14c9228c4798/nlme/src'
installing to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/library/nlme/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (nlme)
begin installing recommended package survival
* installing *source* package 'survival' ...
** package 'survival' successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpiHkbj3/R.INSTALL16c1bac8ba1/survival/src'
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agexact.c -o agexact.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agfit4.c -o agfit4.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agfit5.c -o agfit5.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agmart.c -o agmart.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agmart2.c -o agmart2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agmart3.c -o agmart3.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agscore.c -o agscore.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agsurv3.c -o agsurv3.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agsurv4.c -o agsurv4.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c agsurv5.c -o agsurv5.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chinv2.c -o chinv2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chinv3.c -o chinv3.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cholesky2.c -o cholesky2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cholesky3.c -o cholesky3.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cholesky5.c -o cholesky5.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chsolve2.c -o chsolve2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chsolve3.c -o chsolve3.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c chsolve5.c -o chsolve5.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c concordance1.c -o concordance1.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c cox_Rcallback.c -o cox_Rcallback.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxcount1.c -o coxcount1.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxdetail.c -o coxdetail.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxexact.c -o coxexact.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxfit5.c -o coxfit5.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxfit6.c -o coxfit6.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxmart.c -o coxmart.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxmart2.c -o coxmart2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxph_wtest.c -o coxph_wtest.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxsafe.c -o coxsafe.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxscho.c -o coxscho.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c coxscore.c -o coxscore.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c dmatrix.c -o dmatrix.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c doloop.c -o doloop.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c finegray.c -o finegray.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c gchol.c -o gchol.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c init.c -o init.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pyears1.c -o pyears1.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pyears2.c -o pyears2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pyears3b.c -o pyears3b.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c pystep.c -o pystep.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survConcordance.c -o survConcordance.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survdiff2.c -o survdiff2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survfit4.c -o survfit4.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survfitci.c -o survfitci.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survpenal.c -o survpenal.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survreg6.c -o survreg6.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survreg7.c -o survreg7.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survregc1.c -o survregc1.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survregc2.c -o survregc2.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c survsplit.c -o survsplit.o
x86_64-pc-linux-gnu-gcc -I"/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/include" -DNDEBUG      -fpic  -O2 -pipe -O2 -pipe -march=native -ftree-vectorize  -c tmerge.c -o tmerge.o
x86_64-pc-linux-gnu-gcc -shared -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -Wl,--as-needed -Wl,-rpath=/apps/gentoo/usr/lib64/R/lib -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart2.o agmart3.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o concordance1.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o finegray.o gchol.o init.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o -L/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/lib -lR
make[3]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/RtmpiHkbj3/R.INSTALL16c1bac8ba1/survival/src'
installing to /apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/library/survival/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: segfault from C stack overflow
* removing '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/library/survival'
make[2]: *** [Makefile:53: survival.ts] Error 1
make[2]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/Recommended'
make[1]: *** [Makefile:39: recommended-packages] Error 2
make[1]: Leaving directory '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/src/library/Recommended'
make: *** [Makefile:77: stamp-recommended] Error 2
 [31;01m*[0m ERROR: dev-lang/R-3.5.1::gentoo failed (compile phase):
 [31;01m*[0m   emake failed
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the output of `emerge --info '=dev-lang/R-3.5.1::gentoo'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=dev-lang/R-3.5.1::gentoo'`.
 [31;01m*[0m The complete build log is located at '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/temp/environment'.
 [31;01m*[0m Working directory: '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1'
 [31;01m*[0m S: '/apps/gentoo/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1'