* Package:    sci-chemistry/avogadro2-1.90.0_p20180211
 * Repository: gentoo
 * Maintainer: sci-chemistry@gentoo.org
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux rpc userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox splitdebug userpriv usersandbox
>>> Unpacking source...
>>> Unpacking avogadro2-1.90.0_p20180211.tar.gz to /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work
>>> Source unpacked in /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work
>>> Preparing source in /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 ...
 * Applying avogadro2-1.90.0_p20180211-qt-5.11b3.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build"
cmake -C /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_DOCUMENTATION=no -DAvogadro_ENABLE_RPC=yes -DENABLE_TESTING=no -DUSE_VTK=no -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32
loading initial cache file /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/gentoo_common_config.cmake
-- The C compiler identification is GNU 7.3.0
-- The CXX compiler identification is GNU 7.3.0
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE
-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success
-- Found Git: /usr/bin/git (found version "2.18.0") 
-- Could not use git to determine source version, using version 1.90.0
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") 
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.10.1") found components:  C 
-- <<< Gentoo configuration >>>
Build type      Gentoo
Install path    /usr
Compiler flags:
C               -O2 -pipe -march=native
C++             -O2 -pipe -march=native
Linker flags:
Executable      -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--hash-style=gnu -Wl,-O1 -Wl,--as-needed
Module          -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--hash-style=gnu -Wl,-O1 -Wl,--as-needed
Shared          -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--hash-style=gnu -Wl,-O1 -Wl,--as-needed

-- Configuring done
-- Generating done
-- Build files have been written to: /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build"
make -j1 VERBOSE=1 
/usr/bin/cmake -H/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -B/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/CMakeFiles /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
make -f avogadro/CMakeFiles/avogadro_autogen.dir/build.make avogadro/CMakeFiles/avogadro_autogen.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro_autogen.dir/DependInfo.cmake
Dependee "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro_autogen.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro_autogen.dir/depend.internal".
Dependee "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro_autogen.dir/depend.internal".
Scanning dependencies of target avogadro_autogen
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
make -f avogadro/CMakeFiles/avogadro_autogen.dir/build.make avogadro/CMakeFiles/avogadro_autogen.dir/build
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
[  7%] Automatic MOC for target avogadro
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/cmake -E cmake_autogen /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro_autogen.dir/AutogenInfo.cmake Gentoo
AutoMoc: Generating "moc_predefs.h" because it doesn't exist
AutoMoc: Running command:
/usr/bin/x86_64-pc-linux-gnu-g++ -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -I/usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtConcurrent -I/usr/include -I/usr/include -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB
AutoMoc: Generating "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_aboutdialog.cpp" from its source file "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/aboutdialog.h" because it doesn't exist
AutoMoc: Generating "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp" from its source file "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/backgroundfileformat.h" because it doesn't exist
AutoMoc: Running command:
/usr/lib64/qt5/bin/moc -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -I/usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtConcurrent -I/usr/include -I/usr/include -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB --include /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/moc_predefs.h -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_aboutdialog.cpp /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/aboutdialog.h
AutoMoc: Generating "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_rpclistener.cpp" from its source file "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/rpclistener.h" because it doesn't exist
AutoMoc: Running command:
/usr/lib64/qt5/bin/moc -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -I/usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtConcurrent -I/usr/include -I/usr/include -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB --include /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/moc_predefs.h -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_rpclistener.cpp /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/rpclistener.h
AutoMoc: Generating "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_mainwindow.cpp" from its source file "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/mainwindow.h" because it doesn't exist
AutoMoc: Running command:
/usr/lib64/qt5/bin/moc -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -I/usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtConcurrent -I/usr/include -I/usr/include -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB --include /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/moc_predefs.h -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_mainwindow.cpp /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/mainwindow.h
AutoMoc: Running command:
/usr/lib64/qt5/bin/moc -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -I/usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtConcurrent -I/usr/include -I/usr/include -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB --include /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/moc_predefs.h -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/backgroundfileformat.h
AutoMoc: Generating "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_menubuilder.cpp" from its source file "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/menubuilder.h" because it doesn't exist
AutoMoc: Running command:
/usr/lib64/qt5/bin/moc -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -I/usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtConcurrent -I/usr/include -I/usr/include -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB --include /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/moc_predefs.h -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/EWIEGA46WW/moc_menubuilder.cpp /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/menubuilder.h
AutoMoc: Generating MOC compilation /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/mocs_compilation.cpp
AutoGen: Writing settings file "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro_autogen.dir/AutogenOldSettings.txt"
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
[  7%] Built target avogadro_autogen
make -f avogadro/CMakeFiles/avogadro.dir/build.make avogadro/CMakeFiles/avogadro.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
[ 14%] Generating qrc_avogadro.cpp
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/lib64/qt5/bin/rcc --name avogadro --output /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/qrc_avogadro.cpp /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/avogadro.qrc
[ 21%] Generating ui_aboutdialog.h
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/lib64/qt5/bin/uic -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/ui_aboutdialog.h /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/aboutdialog.ui
[ 28%] Generating ui_mainwindow.h
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/lib64/qt5/bin/uic -o /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/ui_mainwindow.h /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/mainwindow.ui
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro.dir/DependInfo.cmake
Dependee "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro.dir/depend.internal".
Dependee "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/CMakeFiles/avogadro.dir/depend.internal".
Scanning dependencies of target avogadro
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
make -f avogadro/CMakeFiles/avogadro.dir/build.make avogadro/CMakeFiles/avogadro.dir/build
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
[ 35%] Building CXX object avogadro/CMakeFiles/avogadro.dir/aboutdialog.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/aboutdialog.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/aboutdialog.cpp
[ 42%] Building CXX object avogadro/CMakeFiles/avogadro.dir/avogadro.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/avogadro.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/avogadro.cpp
[ 50%] Building CXX object avogadro/CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/backgroundfileformat.cpp
[ 57%] Building CXX object avogadro/CMakeFiles/avogadro.dir/mainwindow.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/mainwindow.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/mainwindow.cpp
[ 64%] Building CXX object avogadro/CMakeFiles/avogadro.dir/menubuilder.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/menubuilder.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/menubuilder.cpp
[ 71%] Building CXX object avogadro/CMakeFiles/avogadro.dir/viewfactory.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/viewfactory.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/viewfactory.cpp
[ 78%] Building CXX object avogadro/CMakeFiles/avogadro.dir/rpclistener.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/rpclistener.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32/avogadro/rpclistener.cpp
[ 85%] Building CXX object avogadro/CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/qrc_avogadro.cpp
[ 92%] Building CXX object avogadro/CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/x86_64-pc-linux-gnu-g++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/include -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32 -isystem /usr/include/eigen3 -I/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtConcurrent   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden   -fPIC -std=c++11 -o CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro/avogadro_autogen/mocs_compilation.cpp
[100%] Linking CXX executable ../bin/avogadro2
cd /var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build/avogadro && /usr/bin/cmake -E cmake_link_script CMakeFiles/avogadro.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-g++  -O2 -pipe -march=native  -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--hash-style=gnu -Wl,-O1 -Wl,--as-needed -rdynamic CMakeFiles/avogadro.dir/aboutdialog.cpp.o CMakeFiles/avogadro.dir/avogadro.cpp.o CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o CMakeFiles/avogadro.dir/mainwindow.cpp.o CMakeFiles/avogadro.dir/menubuilder.cpp.o CMakeFiles/avogadro.dir/viewfactory.cpp.o CMakeFiles/avogadro.dir/rpclistener.cpp.o CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o  -o ../bin/avogadro2 -Wl,-rpath,:::::::::: /usr/lib64/libQt5Concurrent.so.5.9.6 /usr/lib64/libAvogadroQtOpenGL.so.1.91.0 /usr/lib64/libAvogadroQtPlugins.so.1.91.0 /usr/lib64/libMoleQueueServerCore.so /usr/lib64/libMoleQueueClient.so /usr/lib64/libAvogadroRendering.so.1.91.0 /usr/lib/libGLEW.so /usr/lib/libGL.so /usr/lib/libGLU.so /usr/lib64/libAvogadroQtGui.so.1.91.0 /usr/lib64/libQt5Widgets.so.5.9.6 /usr/lib64/libQt5Gui.so.5.9.6 /usr/lib64/libAvogadroIO.so.1.91.0 /usr/lib64/libAvogadroCore.so.1.91.0 /usr/lib64/libQt5Network.so.5.9.6 /usr/lib64/libQt5Core.so.5.9.6 
/usr/lib64/libQt5Network.so.5.9.6: warning: warning: EVP_CipherFinal is often misused, please use EVP_CipherFinal_ex and EVP_CIPHER_CTX_cleanup
collect2: error: ld returned 1 exit status
make[2]: *** [avogadro/CMakeFiles/avogadro.dir/build.make:236: bin/avogadro2] Error 1
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
make[1]: *** [CMakeFiles/Makefile2:89: avogadro/CMakeFiles/avogadro.dir/all] Error 2
make[1]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
make: *** [Makefile:152: all] Error 2
 * ERROR: sci-chemistry/avogadro2-1.90.0_p20180211::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-chemistry/avogadro2-1.90.0_p20180211::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-chemistry/avogadro2-1.90.0_p20180211::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-chemistry:avogadro2-1.90.0_p20180211:20180623-044807.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadro2-1.90.0_p20180211_build'
 * S: '/var/tmp/portage/sci-chemistry/avogadro2-1.90.0_p20180211/work/avogadroapp-d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32'