* Package: sci-libs/flann-1.9.1  * Repository: gentoo  * Maintainer: sci@gentoo.org  * USE: abi_x86_64 amd64 doc elibc_glibc examples kernel_linux mpi octave openmp userland_GNU  * FEATURES: preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking flann-1.9.1.tar.gz to /var/tmp/portage/sci-libs/flann-1.9.1/work >>> Source unpacked in /var/tmp/portage/sci-libs/flann-1.9.1/work >>> Preparing source in /var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1 ... >>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build" cmake -C /var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_C_BINDINGS=ON -DBUILD_PYTHON_BINDINGS=OFF -DPYTHON_EXECUTABLE= -DDOCDIR=share/doc/flann-1.9.1 -DBUILD_CUDA_LIB=no -DBUILD_EXAMPLES=yes -DBUILD_DOC=yes -DBUILD_TESTS=OFF -DBUILD_MATLAB_BINDINGS=yes -DUSE_MPI=yes -DUSE_OPENMP=yes -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build/gentoo_toolchain.cmake /var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1 loading initial cache file /var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build/gentoo_common_config.cmake Re-run cmake no build system arguments -- The C compiler identification is GNU 7.3.0 -- The CXX compiler identification is GNU 7.3.0 -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/mpicxx -- Check for working CXX compiler: /usr/bin/mpicxx -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.10.1") -- Found MPI_C: /usr/lib64/libmpich.so (found version "2.2") -- Found MPI_CXX: /usr/bin/mpicxx (found version "2.2") -- Found MPI: TRUE (found version "2.2") -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Boost version: 1.65.0 -- Found the following Boost libraries: -- mpi -- system -- serialization -- thread -- chrono -- date_time -- atomic -- Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY) CMake Warning at CMakeLists.txt:117 (message): gtest library not found, some tests will not be run -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") CMake Warning (dev) at src/matlab/CMakeLists.txt:19 (get_property): Policy CMP0026 is not set: Disallow use of the LOCATION target property. Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy command to set the policy and suppress this warning. The LOCATION property should not be read from target "flann_s". Use the target name directly with add_custom_command, or use the generator expression $, as appropriate. This warning is for project developers. Use -Wno-dev to suppress it. -- Found LATEX: /usr/bin/latex -- Install prefix: /usr -- Build type: Gentoo -- Building C bindings: ON -- Building examples: yes -- Building tests: OFF -- Building documentation: yes -- Building python bindings: OFF -- Building matlab bindings: yes -- Building CUDA library: no -- Using OpenMP support: yes -- Using MPI support: yes -- <<< Gentoo configuration >>> Build type Gentoo Install path /usr Compiler flags: C -march=native -O2 -pipe -fopenmp C++ -march=native -O2 -pipe -std=c++11 -fopenmp Linker flags: Executable -Wl,-O1 -Wl,--as-needed Module -Wl,-O1 -Wl,--as-needed Shared -Wl,-O1 -Wl,--as-needed -- Configuring done CMake Error at src/cpp/CMakeLists.txt:32 (add_library): No SOURCES given to target: flann_cpp CMake Error at src/cpp/CMakeLists.txt:86 (add_library): No SOURCES given to target: flann -- Build files have been written to: /var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build * ERROR: sci-libs/flann-1.9.1::gentoo failed (configure phase): * cmake failed * * Call stack: * ebuild.sh, line 124: Called src_configure * environment, line 3121: Called cmake-utils_src_configure * environment, line 985: Called die * The specific snippet of code: * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; * * If you need support, post the output of `emerge --info '=sci-libs/flann-1.9.1::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/flann-1.9.1::gentoo'`. * The complete build log is located at '/var/log/portage/sci-libs:flann-1.9.1:20180606-162853.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/flann-1.9.1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/flann-1.9.1/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1_build' * S: '/var/tmp/portage/sci-libs/flann-1.9.1/work/flann-1.9.1'