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Gentoo's Bugzilla – Attachment 532938 Details for
Bug 656432
sci-libs/silo-4.11 : configure: error: Failed to find matching components of a complete
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sci-libs:silo-4.10.2-r1:20180524-052638.log
sci-libs:silo-4.10.2-r1:20180524-052638.log (text/plain), 14.24 KB, created by
Toralf Förster
on 2018-05-24 17:13:01 UTC
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Description:
sci-libs:silo-4.10.2-r1:20180524-052638.log
Filename:
MIME Type:
Creator:
Toralf Förster
Created:
2018-05-24 17:13:01 UTC
Size:
14.24 KB
patch
obsolete
> * Package: sci-libs/silo-4.10.2-r1 > * Repository: gentoo > * Maintainer: slis@gentoo.org cluster@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux qt5 silex userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > * Using following Fortran compiler: > * F77: x86_64-pc-linux-gnu-gfortran > * FC: x86_64-pc-linux-gnu-gfortran >>>> Unpacking source... >>>> Unpacking silo-4.10.2.tar.gz to /var/tmp/portage/sci-libs/silo-4.10.2-r1/work >>>> Source unpacked in /var/tmp/portage/sci-libs/silo-4.10.2-r1/work >>>> Preparing source in /var/tmp/portage/sci-libs/silo-4.10.2-r1/work/silo-4.10.2 ... > * Applying silo-4.10.2-qtlibs.patch ... > [ ok ] > * Applying silo-4.10.2-qt5.patch ... > [ ok ] > * Applying silo-4.10.2-tests.patch ... > [ ok ] > * Applying silo-4.10.2-mpiposix.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/silo-4.10.2-r1/work/silo-4.10.2 ... > * econf: updating silo-4.10.2/config/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating silo-4.10.2/config/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --libdir=/usr/lib64 --enable-install-lite-headers --enable-shared --enable-silex --disable-static --with-Qt-lib-dir=/usr/lib64 --with-Qt-include-dir=/usr/include/qt5 --with-Qt-bin-dir=/usr/lib64/qt5/bin --without-hdf5 >checking for a BSD-compatible install... /usr/lib/portage/python3.5/ebuild-helpers/xattr/install -c >checking whether build environment is sane... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking for gawk... gawk >checking whether make sets $(MAKE)... yes >checking whether to enable maintainer-specific portions of Makefiles... no >checking build system type... x86_64-pc-linux-gnu >checking host system type... x86_64-pc-linux-gnu >checking what version the package is... 4.10.2 >checking for site config host file... no >checking for config-site x86_64-pc-linux-gnu... no >checking for config-site x86_64-pc-linux-gnu... no >checking for config-site pc-linux-gnu... no >checking for config-site pc-linux-gnu... no >checking for config-site x86_64-linux-gnu... no >checking for config-site x86_64-linux-gnu... no >checking for config-site x86_64-pc... no >checking for config-site linux-gnu... no >checking for config-site linux-gnu... no >checking for config-site pc... no >checking for config-site x86_64... found >checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ >checking for C++ compiler default output file name... a.out >checking whether the C++ compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C++ compiler... yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes >checking for style of include used by make... GNU >checking dependency style of x86_64-pc-linux-gnu-g++... none >checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc >checking whether we are using the GNU C compiler... yes >checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes >checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking dependency style of x86_64-pc-linux-gnu-gcc... none >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes >checking for x86_64-pc-linux-gnu-g77... x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes >checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v >checking for Fortran libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/7.3.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/7.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/7.3.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/7.3.0/../../.. -lgfortran -lm -lquadmath >checking for dummy main to link with Fortran libraries... none >checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore >checking whether make sets $(MAKE)... (cached) yes >checking for a sed that does not truncate output... /bin/sed >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for fgrep... /bin/grep -F >checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B >checking the name lister (/usr/bin/nm -B) interface... BSD nm >checking whether ln -s works... yes >checking the maximum length of command line arguments... 1572864 >checking whether the shell understands some XSI constructs... yes >checking whether the shell understands "+="... yes >checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r >checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump >checking how to recognize dependent libraries... pass_all >checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar >checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip >checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib >checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for dlfcn.h... yes >checking whether we are using the GNU C++ compiler... (cached) yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes >checking dependency style of x86_64-pc-linux-gnu-g++... (cached) none >checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E >checking for x86_64-pc-linux-gnu-g77... (cached) x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... (cached) yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... (cached) yes >checking for x86_64-pc-linux-gnu-gfortran... (cached) x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... (cached) yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... (cached) yes >checking for objdir... .libs >checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no >checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC >checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes >checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes >checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC >checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes >checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking for library containing strerror... none required >checking for hzip... found >checking zlib.h usability... yes >checking zlib.h presence... yes >checking for zlib.h... yes >checking for inflateEnd in -lz... yes >checking for fpzip... found >checking compiler optimization... disabled >checking whether C compiler accepts "-D_LARGEFILE_SOURCE"... yes >checking whether C compiler accepts "-D_LARGEFILE64_SOURCE"... yes >checking whether C compiler accepts "-D_FILE_OFFSET_BITS=64"... yes >checking whether C compiler accepts "-Wdeclaration-after-statement"... yes >checking size of off64_t... 8 >checking for a BSD-compatible install... /usr/lib/portage/python3.5/ebuild-helpers/xattr/install -c >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking stdarg.h usability... yes >checking stdarg.h presence... yes >checking for stdarg.h... yes >checking for sys/stat.h... (cached) yes >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking sys/fcntl.h usability... yes >checking sys/fcntl.h presence... yes >checking for sys/fcntl.h... yes >checking fnmatch.h usability... yes >checking fnmatch.h presence... yes >checking for fnmatch.h... yes >checking ieeefp.h usability... no >checking ieeefp.h presence... no >checking for ieeefp.h... no >checking for sys/types.h... (cached) yes >checking for unistd.h... (cached) yes >checking for ANSI C header files... (cached) yes >checking for fclose function pointer... yes >checking for fflush function pointer... yes >checking for fopen function pointer... yes >checking for fprintf function pointer... yes >checking for fread function pointer... yes >checking for fseek function pointer... yes >checking for setvbuf function pointer... yes >checking for ftell function pointer... yes >checking for fwrite function pointer... yes >checking for memmove... yes >checking for fnmatch... yes >checking for isnan... yes >checking for fpclass... no >checking for strerror... yes >checking if setjmp and longjmp work... yes >checking for X... libraries , headers >checking for gethostbyname... yes >checking for connect... yes >checking for remove... yes >checking for shmat... yes >checking for IceConnectionNumber in -lICE... yes >checking for Qt... yes: > QT_CXXFLAGS=-I/usr/include/qt5 -I/usr/include/qt5/Qt -I/usr/include/qt5/QtCore -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -fPIC > QT_DIR= > QT_LIBS=-L/usr/lib64 -lQt5AccessibilitySupport -lSM -lICE -lQt5Core -lQt5Gui -lQt5Widgets -lX11 -lXext -lXmu -lXt -lXi > QT_UIC= > QT_MOC=/usr/lib64/qt5/bin/moc > QT_LRELEASE=/usr/lib64/qt5/bin/lrelease > QT_LUPDATE=/usr/lib64/qt5/bin/lupdate >checking correct functioning of Qt installation... failure >configure: error: Failed to find matching components of a complete > Qt installation. Try using more options, > see ./configure --help. > >!!! Please attach the following file when seeking support: >!!! /var/tmp/portage/sci-libs/silo-4.10.2-r1/work/silo-4.10.2/config.log > * ERROR: sci-libs/silo-4.10.2-r1::gentoo failed (configure phase): > * econf failed > * > * Call stack: > * ebuild.sh, line 124: Called src_configure > * environment, line 2015: Called econf '--enable-install-lite-headers' '--enable-shared' '--enable-silex' '--disable-static' '--with-Qt-lib-dir=/usr/lib64' '--with-Qt-include-dir=/usr/include/qt5' '--with-Qt-bin-dir=/usr/lib64/qt5/bin' '--without-hdf5' > * phase-helpers.sh, line 666: Called __helpers_die 'econf failed' > * isolated-functions.sh, line 117: Called die > * The specific snippet of code: > * die "$@" > * > * If you need support, post the output of `emerge --info '=sci-libs/silo-4.10.2-r1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-libs/silo-4.10.2-r1::gentoo'`. > * The complete build log is located at '/var/log/portage/sci-libs:silo-4.10.2-r1:20180524-052638.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/silo-4.10.2-r1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-libs/silo-4.10.2-r1/temp/environment'. > * Working directory: '/var/tmp/portage/sci-libs/silo-4.10.2-r1/work/silo-4.10.2' > * S: '/var/tmp/portage/sci-libs/silo-4.10.2-r1/work/silo-4.10.2'
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