* Package: sci-physics/lammps-20151207 * Repository: gentoo * Maintainer: nicolasbock@gentoo.org sci-physics@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 userland_GNU * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran >>> Unpacking source... >>> Unpacking lammps-7Dec15.tar.gz to /var/tmp/portage/sci-physics/lammps-20151207/work >>> Source unpacked in /var/tmp/portage/sci-physics/lammps-20151207/work >>> Preparing source in /var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15 ... * Applying lammps-python3-r1.patch ... [ ok ] * Applying python-shebang.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15 ... >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15 ... * Activating lammps packages... make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-asphere make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package asphere make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-body make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package body make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-class2 make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package class2 make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-colloid make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package colloid make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-coreshell make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package coreshell make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-dipole make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package dipole make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-fld make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package fld make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-granular make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package granular make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-kspace make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package kspace updating package CORESHELL make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-manybody make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package manybody make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-mc make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package mc make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-meam make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package meam make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-misc make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package misc make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-molecule make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package molecule make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-opt make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package opt make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-peri make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package peri make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-poems make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package poems make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-qeq make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package qeq make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-reax make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package reax make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-replica make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package replica make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-rigid make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package rigid make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-shock make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package shock make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-snap make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package snap make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-srd make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package srd make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-user-eff make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package user-eff make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-user-fep make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package user-fep make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-user-phonon make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package user-phonon make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-user-sph make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package user-sph make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-voronoi make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package voronoi make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src yes-xtc make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' Installing package xtc make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src mpi-stubs make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make[1]: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' rm -f *.o libmpi_stubs.a make[1]: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' make[1]: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c mpi.c x86_64-pc-linux-gnu-ar rs libmpi_stubs.a mpi.o x86_64-pc-linux-gnu-ar: creating libmpi_stubs.a make[1]: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' * Building packages... make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/meam -j1 -f Makefile.gfortran make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/meam' x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_data.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_setup_done.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_setup_global.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_setup_param.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_dens_init.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_dens_final.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_force.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c meam_cleanup.F x86_64-pc-linux-gnu-ar rv libmeam.a meam_data.o meam_setup_done.o meam_setup_global.o meam_setup_param.o meam_dens_init.o meam_dens_final.o meam_force.o meam_cleanup.o x86_64-pc-linux-gnu-ar: creating libmeam.a a - meam_data.o a - meam_setup_done.o a - meam_setup_global.o a - meam_setup_param.o a - meam_dens_init.o a - meam_dens_final.o a - meam_force.o a - meam_cleanup.o make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/meam' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/poems -f Makefile.g++ make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/poems' x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c workspace.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c system.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c poemsobject.cpp poemsobject.cpp: In constructor ‘POEMSObject::POEMSObject()’: poemsobject.cpp:24:23: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] ChangeName("unnamed"); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c body.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c rigidbody.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c particle.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c inertialframe.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c joint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c revolutejoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c prismaticjoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c sphericaljoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c freebodyjoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c body23joint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c mixedjoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c point.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c fixedpoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c solver.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c onsolver.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c onfunctions.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c onbody.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c virtualmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c matrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c matrixfun.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c mat3x3.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c virtualcolmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c colmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c vect3.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c virtualrowmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c rowmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c mat6x6.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c vect6.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c fastmatrixops.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c colmatmap.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c eulerparameters.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c vect4.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c norm.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c mat4x4.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -c poemstreenode.cpp x86_64-pc-linux-gnu-ar rv libpoems.a workspace.o system.o poemsobject.o body.o rigidbody.o particle.o inertialframe.o joint.o revolutejoint.o prismaticjoint.o sphericaljoint.o freebodyjoint.o body23joint.o mixedjoint.o point.o fixedpoint.o solver.o onsolver.o onfunctions.o onbody.o virtualmatrix.o matrix.o matrixfun.o mat3x3.o virtualcolmatrix.o colmatrix.o vect3.o virtualrowmatrix.o rowmatrix.o mat6x6.o vect6.o fastmatrixops.o colmatmap.o eulerparameters.o vect4.o norm.o mat4x4.o poemstreenode.o x86_64-pc-linux-gnu-ar: creating libpoems.a a - workspace.o a - system.o a - poemsobject.o a - body.o a - rigidbody.o a - particle.o a - inertialframe.o a - joint.o a - revolutejoint.o a - prismaticjoint.o a - sphericaljoint.o a - freebodyjoint.o a - body23joint.o a - mixedjoint.o a - point.o a - fixedpoint.o a - solver.o a - onsolver.o a - onfunctions.o a - onbody.o a - virtualmatrix.o a - matrix.o a - matrixfun.o a - mat3x3.o a - virtualcolmatrix.o a - colmatrix.o a - vect3.o a - virtualrowmatrix.o a - rowmatrix.o a - mat6x6.o a - vect6.o a - fastmatrixops.o a - colmatmap.o a - eulerparameters.o a - vect4.o a - norm.o a - mat4x4.o a - poemstreenode.o make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/poems' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/reax -j1 -f Makefile.gfortran make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/reax' x86_64-pc-linux-gnu-gfortran -O2 -pipe -c reax_connect.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c reax_inout.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c reax_lammps.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c reax_poten.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c reax_reac.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -c reax_charges.F x86_64-pc-linux-gnu-ar rv libreax.a reax_connect.o reax_inout.o reax_lammps.o reax_poten.o reax_reac.o reax_charges.o x86_64-pc-linux-gnu-ar: creating libreax.a a - reax_connect.o a - reax_inout.o a - reax_lammps.o a - reax_poten.o a - reax_reac.o a - reax_charges.o make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/reax' * Cleaning packages... make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/meam -f Makefile.gfortran clean make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/meam' rm *.o *.mod *~ libmeam.a rm: cannot remove '*~': No such file or directory make: [Makefile.gfortran:53: clean] Error 1 (ignored) make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/meam' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/poems -f Makefile.g++ clean make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/poems' rm *.o *.d *~ libpoems.a rm: cannot remove '*.d': No such file or directory rm: cannot remove '*~': No such file or directory make: [Makefile.g++:100: clean] Error 1 (ignored) make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/poems' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/reax -f Makefile.gfortran clean make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/reax' rm *.o libreax.a make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/reax' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I. -fPIC' 'F90FLAGS=-O2 -pipe -fPIC' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src mpi-stubs make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make[1]: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' rm -f *.o libmpi_stubs.a make[1]: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' make[1]: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c mpi.c x86_64-pc-linux-gnu-ar rs libmpi_stubs.a mpi.o x86_64-pc-linux-gnu-ar: creating libmpi_stubs.a make[1]: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/STUBS' make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' * Building packages... make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I. -fPIC' 'F90FLAGS=-O2 -pipe -fPIC' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/meam -j1 -f Makefile.gfortran make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/meam' x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_data.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_setup_done.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_setup_global.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_setup_param.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_dens_init.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_dens_final.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_force.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c meam_cleanup.F x86_64-pc-linux-gnu-ar rv libmeam.a meam_data.o meam_setup_done.o meam_setup_global.o meam_setup_param.o meam_dens_init.o meam_dens_final.o meam_force.o meam_cleanup.o x86_64-pc-linux-gnu-ar: creating libmeam.a a - meam_data.o a - meam_setup_done.o a - meam_setup_global.o a - meam_setup_param.o a - meam_dens_init.o a - meam_dens_final.o a - meam_force.o a - meam_cleanup.o make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/meam' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I. -fPIC' 'F90FLAGS=-O2 -pipe -fPIC' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/poems -f Makefile.g++ make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/poems' x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c workspace.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c system.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c poemsobject.cpp poemsobject.cpp: In constructor ‘POEMSObject::POEMSObject()’: poemsobject.cpp:24:23: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] ChangeName("unnamed"); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c body.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c rigidbody.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c particle.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c inertialframe.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c joint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c revolutejoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c prismaticjoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c sphericaljoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c freebodyjoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c body23joint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c mixedjoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c point.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c fixedpoint.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c solver.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c onsolver.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c onfunctions.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c onbody.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c virtualmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c matrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c matrixfun.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c mat3x3.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c virtualcolmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c colmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c vect3.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c virtualrowmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c rowmatrix.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c mat6x6.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c vect6.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c fastmatrixops.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c colmatmap.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c eulerparameters.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c vect4.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c norm.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c mat4x4.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -c poemstreenode.cpp x86_64-pc-linux-gnu-ar rv libpoems.a workspace.o system.o poemsobject.o body.o rigidbody.o particle.o inertialframe.o joint.o revolutejoint.o prismaticjoint.o sphericaljoint.o freebodyjoint.o body23joint.o mixedjoint.o point.o fixedpoint.o solver.o onsolver.o onfunctions.o onbody.o virtualmatrix.o matrix.o matrixfun.o mat3x3.o virtualcolmatrix.o colmatrix.o vect3.o virtualrowmatrix.o rowmatrix.o mat6x6.o vect6.o fastmatrixops.o colmatmap.o eulerparameters.o vect4.o norm.o mat4x4.o poemstreenode.o x86_64-pc-linux-gnu-ar: creating libpoems.a a - workspace.o a - system.o a - poemsobject.o a - body.o a - rigidbody.o a - particle.o a - inertialframe.o a - joint.o a - revolutejoint.o a - prismaticjoint.o a - sphericaljoint.o a - freebodyjoint.o a - body23joint.o a - mixedjoint.o a - point.o a - fixedpoint.o a - solver.o a - onsolver.o a - onfunctions.o a - onbody.o a - virtualmatrix.o a - matrix.o a - matrixfun.o a - mat3x3.o a - virtualcolmatrix.o a - colmatrix.o a - vect3.o a - virtualrowmatrix.o a - rowmatrix.o a - mat6x6.o a - vect6.o a - fastmatrixops.o a - colmatmap.o a - eulerparameters.o a - vect4.o a - norm.o a - mat4x4.o a - poemstreenode.o make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/poems' make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I. -fPIC' 'F90FLAGS=-O2 -pipe -fPIC' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C lib/reax -j1 -f Makefile.gfortran make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/reax' x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c reax_connect.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c reax_inout.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c reax_lammps.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c reax_poten.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c reax_reac.F x86_64-pc-linux-gnu-gfortran -O2 -pipe -fPIC -c reax_charges.F x86_64-pc-linux-gnu-ar rv libreax.a reax_connect.o reax_inout.o reax_lammps.o reax_poten.o reax_reac.o reax_charges.o x86_64-pc-linux-gnu-ar: creating libreax.a a - reax_connect.o a - reax_inout.o a - reax_lammps.o a - reax_poten.o a - reax_reac.o a - reax_charges.o make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/lib/reax' * Building shared library... make -j 1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=x86_64-pc-linux-gnu-g++ F90=x86_64-pc-linux-gnu-gfortran LINK=x86_64-pc-linux-gnu-g++ 'CCFLAGS=-O2 -pipe -march=native -I../../src -I. -fPIC' 'F90FLAGS=-O2 -pipe -fPIC' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC=-I../STUBS MPI_PATH=-L../STUBS MPI_LIB=-lmpi_stubs user-atc_SYSLIB= -C src mode=shlib serial make: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' make[1]: Entering directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/Obj_shared_serial' x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../kspace.cpp > kspace.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_charmm_coul_long_opt.cpp > pair_lj_charmm_coul_long_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eam_fs.cpp > pair_eam_fs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min_fire.cpp > min_fire.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nph_sphere.cpp > fix_nph_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../verlet.cpp > verlet.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tersoff.cpp > pair_tersoff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min_sd.cpp > min_sd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_charmm_coul_long.cpp > pair_lj_charmm_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_dcd.cpp > dump_dcd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_sphere.cpp > atom_vec_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_peri_neigh.cpp > fix_peri_neigh.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral.cpp > dihedral.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_full.cpp > atom_vec_full.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_brownian_poly.cpp > pair_brownian_poly.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute.cpp > compute.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_comb3.cpp > pair_comb3.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_derive.cpp > neigh_derive.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_long.cpp > pair_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_peri_lps.cpp > pair_peri_lps.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_plasticity_atom.cpp > compute_plasticity_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_chunk.cpp > compute_temp_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_freeze.cpp > fix_freeze.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_inertia_chunk.cpp > compute_inertia_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle.cpp > angle.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_torque_chunk.cpp > compute_torque_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_body.cpp > fix_nve_body.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_momentum.cpp > fix_momentum.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_gromacs.cpp > pair_lj_gromacs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_erotate_rigid.cpp > compute_erotate_rigid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_born_coul_wolf.cpp > pair_born_coul_wolf.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_event_tad.cpp > fix_event_tad.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_cylinder.cpp > region_cylinder.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_npt_sphere.cpp > fix_npt_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_hbond_dreiding_lj.cpp > pair_hbond_dreiding_lj.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../set.cpp > set.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_meso.cpp > atom_vec_meso.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_hybrid.cpp > atom_vec_hybrid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_comb.cpp > pair_comb.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../citeme.cpp > citeme.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_addforce.cpp > fix_addforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_table.cpp > bond_table.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tri_lj.cpp > pair_tri_lj.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_deform_eff.cpp > compute_temp_deform_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_orient_fcc.cpp > fix_orient_fcc.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../lammps.cpp > lammps.d In file included from ../style_dump.h:8:0, from ../lammps.cpp:24: ../dump_xtc.h:28:21: fatal error: rpc/rpc.h: No such file or directory #include "rpc/rpc.h" ^ compilation terminated. x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_improper_local.cpp > compute_improper_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_charmm.cpp > angle_charmm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../update.cpp > update.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../thermo.cpp > thermo.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_cosine_periodic.cpp > angle_cosine_periodic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_template.cpp > atom_vec_template.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../improper_cvff.cpp > improper_cvff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump.cpp > dump.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nphug.cpp > fix_nphug.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_snad_atom.cpp > compute_snad_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_body.cpp > pair_body.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_colloid.cpp > fix_wall_colloid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cubic.cpp > pair_lj_cubic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_spring_self.cpp > fix_spring_self.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix.cpp > fix.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sph_heatconduction.cpp > pair_sph_heatconduction.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_dsf.cpp > pair_lj_cut_coul_dsf.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_property_atom.cpp > fix_property_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_pour.cpp > fix_pour.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_helix.cpp > dihedral_helix.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nh.cpp > fix_nh.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../error.cpp > error.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../remap.cpp > remap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../balance.cpp > balance.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../rcb.cpp > rcb.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_temp_berendsen.cpp > fix_temp_berendsen.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_erotate_sphere_atom.cpp > compute_erotate_sphere_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_spring.cpp > fix_spring.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../modify.cpp > modify.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_drag.cpp > fix_drag.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../reader_native.cpp > reader_native.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_temp_rescale_eff.cpp > fix_temp_rescale_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_gran.cpp > neigh_gran.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_reflect.cpp > fix_wall_reflect.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sph_rhosum.cpp > pair_sph_rhosum.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_meso_stationary.cpp > fix_meso_stationary.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_body.cpp > atom_vec_body.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_prism.cpp > region_prism.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_ke_rigid.cpp > compute_ke_rigid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../change_box.cpp > change_box.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_oneway.cpp > fix_oneway.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_dihedral_local.cpp > compute_dihedral_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../ewald_disp.cpp > ewald_disp.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_vashishta.cpp > pair_vashishta.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_peri_eps.cpp > pair_peri_eps.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_ke_eff.cpp > compute_ke_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_lj1043.cpp > fix_wall_lj1043.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_class2_coul_cut.cpp > pair_lj_class2_coul_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_mie_cut.cpp > pair_mie_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_quartic.cpp > bond_quartic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_soft.cpp > pair_lj_cut_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_piston.cpp > fix_wall_piston.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_debye.cpp > pair_coul_debye.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_asphere.cpp > fix_nve_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_time.cpp > fix_ave_time.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../memory.cpp > memory.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_image.cpp > dump_image.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../improper_umbrella.cpp > improper_umbrella.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nvt_sllod_eff.cpp > fix_nvt_sllod_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../respa.cpp > respa.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_ke_atom.cpp > compute_ke_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_hybrid_overlay.cpp > pair_hybrid_overlay.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../special.cpp > special.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_atom_swap.cpp > fix_atom_swap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_property_chunk.cpp > compute_property_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_profile.cpp > compute_temp_profile.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_external.cpp > fix_external.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../universe.cpp > universe.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_npt.cpp > fix_npt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_line.cpp > fix_nve_line.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_balance.cpp > fix_balance.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_store_force.cpp > fix_store_force.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_histo_weight.cpp > fix_ave_histo_weight.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_class2_coul_long.cpp > pair_lj_class2_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../body.cpp > body.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../write_data.cpp > write_data.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_streitz.cpp > pair_coul_streitz.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_local.cpp > dump_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_dsmc.cpp > pair_dsmc.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_plane.cpp > region_plane.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_vacf.cpp > compute_vacf.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_snap.cpp > pair_snap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../read_restart.cpp > read_restart.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_qeq_dynamic.cpp > fix_qeq_dynamic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_class2.cpp > pair_lj_class2.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../comm_brick.cpp > comm_brick.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_dt_reset.cpp > fix_dt_reset.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_cosine_delta.cpp > angle_cosine_delta.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_group.cpp > fix_group.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../minimize.cpp > minimize.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_group_group.cpp > compute_group_group.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../temper.cpp > temper.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_bond_local.cpp > compute_bond_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../sna.cpp > sna.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pppm.cpp > pppm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_event_displace.cpp > compute_event_displace.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_yukawa.cpp > pair_yukawa.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nvt_asphere.cpp > fix_nvt_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sw.cpp > pair_sw.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../delete_atoms.cpp > delete_atoms.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ttm.cpp > fix_ttm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_peri.cpp > atom_vec_peri.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_charmm_coul_msm.cpp > pair_lj_charmm_coul_msm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tip4p_long.cpp > pair_tip4p_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_temp_csvr.cpp > fix_temp_csvr.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sph_taitwater_morris.cpp > pair_sph_taitwater_morris.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp.cpp > compute_temp.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_cut_soft.cpp > pair_coul_cut_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_pair.cpp > compute_pair.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_fep.cpp > compute_fep.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_event_prd.cpp > fix_event_prd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_movie.cpp > dump_movie.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_viscous.cpp > fix_viscous.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_cosine.cpp > angle_cosine.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eam.cpp > pair_eam.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_gyration.cpp > compute_gyration.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../improper.cpp > improper.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_respa.cpp > fix_respa.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_hybrid.cpp > bond_hybrid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tersoff_zbl.cpp > pair_tersoff_zbl.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_harmonic.cpp > fix_wall_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_gayberne.cpp > pair_gayberne.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_qeq_shielded.cpp > fix_qeq_shielded.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_srd.cpp > fix_wall_srd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_qeq_comb.cpp > fix_qeq_comb.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_region.cpp > compute_temp_region.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min_hftn.cpp > min_hftn.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_pe_atom.cpp > compute_pe_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_long_soft.cpp > pair_coul_long_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_planeforce.cpp > fix_planeforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_shear_history.cpp > fix_shear_history.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_hybrid.cpp > angle_hybrid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_hybrid.cpp > pair_hybrid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nh.cpp > fix_rigid_nh.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_dpd_tstat.cpp > pair_dpd_tstat.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../library.cpp > library.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_soft.cpp > pair_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_ke.cpp > compute_ke.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nve_small.cpp > fix_rigid_nve_small.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nh_eff.cpp > fix_nh_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_electron.cpp > atom_vec_electron.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../body_nparticle.cpp > body_nparticle.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../force.cpp > force.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_langevin.cpp > fix_langevin.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_property_local.cpp > compute_property_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../comm_tiled.cpp > comm_tiled.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_meso_t_atom.cpp > compute_meso_t_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nvt_sllod.cpp > fix_nvt_sllod.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_dipole.cpp > atom_vec_dipole.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eff_cut.cpp > pair_eff_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_msd_chunk.cpp > compute_msd_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_pressure.cpp > compute_pressure.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_dpd.cpp > pair_dpd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lcbop.cpp > pair_lcbop.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_qeq_point.cpp > fix_qeq_point.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pppm_cg.cpp > pppm_cg.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lubricate.cpp > pair_lubricate.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_print.cpp > fix_print.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_efield.cpp > fix_efield.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_reax_bonds.cpp > fix_reax_bonds.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_msd_nongauss.cpp > compute_msd_nongauss.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_qeq_slater.cpp > fix_qeq_slater.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pppm_disp_tip4p.cpp > pppm_disp_tip4p.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_press_berendsen.cpp > fix_press_berendsen.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_gran_hooke_history.cpp > pair_gran_hooke_history.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../remap_wrap.cpp > remap_wrap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_peri_ves.cpp > pair_peri_ves.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min_linesearch.cpp > min_linesearch.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_asphere.cpp > compute_temp_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_ti.cpp > compute_ti.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../ewald.cpp > ewald.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_fene_expand.cpp > bond_fene_expand.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_bop.cpp > pair_bop.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_cut.cpp > pair_lj_cut_coul_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nvt_small.cpp > fix_rigid_nvt_small.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_line_lj.cpp > pair_line_lj.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tersoff_mod.cpp > pair_tersoff_mod.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../delete_bonds.cpp > delete_bonds.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_polymorphic.cpp > pair_polymorphic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lubricate_poly.cpp > pair_lubricate_poly.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_omega_chunk.cpp > compute_omega_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_table.cpp > pair_table.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eim.cpp > pair_eim.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_half_nsq.cpp > neigh_half_nsq.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_zbl.cpp > pair_zbl.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut.cpp > pair_lj_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_half_multi.cpp > neigh_half_multi.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_long_opt.cpp > pair_lj_cut_coul_long_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_heat_flux.cpp > compute_heat_flux.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_smooth_linear.cpp > pair_lj_smooth_linear.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_fene.cpp > bond_fene.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../random_park.cpp > random_park.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../molecule.cpp > molecule.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_shake.cpp > fix_shake.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_peri_pmb.cpp > pair_peri_pmb.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pppm_disp.cpp > pppm_disp.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_morse.cpp > bond_morse.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_opls.cpp > dihedral_opls.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_opt.cpp > pair_lj_cut_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_pe.cpp > compute_pe.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_evaporate.cpp > fix_evaporate.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_adapt_fep.cpp > fix_adapt_fep.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_vcm_chunk.cpp > compute_vcm_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_nm_cut_coul_cut.cpp > pair_nm_cut_coul_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_custom.cpp > dump_custom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../read_data.cpp > read_data.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_long_coul_long_opt.cpp > pair_lj_long_coul_long_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../improper_harmonic.cpp > improper_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eam_opt.cpp > pair_eam_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_displace_atom.cpp > compute_displace_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_charmm_coul_long_soft.cpp > pair_lj_charmm_coul_long_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../domain.cpp > domain.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_indent.cpp > fix_indent.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_rebo.cpp > pair_rebo.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_request.cpp > neigh_request.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_voronoi_atom.cpp > compute_voronoi_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_gran_hooke.cpp > pair_gran_hooke.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_long_cs.cpp > pair_lj_cut_coul_long_cs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tip4p_cut.cpp > pair_tip4p_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_meam.cpp > pair_meam.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_half_bin.cpp > neigh_half_bin.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../output.cpp > output.d In file included from ../style_dump.h:8:0, from ../output.cpp:18: ../dump_xtc.h:28:21: fatal error: rpc/rpc.h: No such file or directory #include "rpc/rpc.h" ^ compilation terminated. x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_npt.cpp > fix_rigid_npt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_hexorder_atom.cpp > compute_hexorder_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_harmonic.cpp > dihedral_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_morse.cpp > pair_morse.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_tri.cpp > fix_nve_tri.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_npt_eff.cpp > fix_npt_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_class2.cpp > bond_class2.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_beck.cpp > pair_beck.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_gcmc.cpp > fix_gcmc.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_bond_swap.cpp > fix_bond_swap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_debye.cpp > pair_lj_cut_coul_debye.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nvt_eff.cpp > fix_nvt_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_noforce.cpp > fix_nve_noforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_nm_cut.cpp > pair_nm_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../reader.cpp > reader.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_msst.cpp > fix_msst.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_recenter.cpp > fix_recenter.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_buck_long_coul_long.cpp > pair_buck_long_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nh_sphere.cpp > fix_nh_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_gld.cpp > fix_gld.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_tune_kspace.cpp > fix_tune_kspace.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min.cpp > min.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_neb.cpp > fix_neb.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_setforce.cpp > fix_setforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fft3d_wrap.cpp > fft3d_wrap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_tfmc.cpp > fix_tfmc.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_box_relax.cpp > fix_box_relax.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_long_coul_long.cpp > pair_lj_long_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_thermal_conductivity.cpp > fix_thermal_conductivity.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../xdr_compat.cpp > xdr_compat.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../msm.cpp > msm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_gravity.cpp > fix_gravity.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_yukawa_colloid.cpp > pair_yukawa_colloid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_gyration_chunk.cpp > compute_gyration_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_tri.cpp > atom_vec_tri.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../info.cpp > info.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_lj126.cpp > fix_wall_lj126.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid.cpp > fix_rigid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eam_fs_opt.cpp > pair_eam_fs_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_coord_atom.cpp > compute_coord_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_bond.cpp > neigh_bond.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sph_idealgas.cpp > pair_sph_idealgas.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_cfg.cpp > dump_cfg.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_dipole_cut.cpp > pair_lj_cut_dipole_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_buck_coul_msm.cpp > pair_buck_coul_msm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_block.cpp > region_block.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_orientorder_atom.cpp > compute_orientorder_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_atom.cpp > dump_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_reduce_region.cpp > compute_reduce_region.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_hybrid.cpp > dihedral_hybrid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_restrain.cpp > fix_restrain.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lubricateU_poly.cpp > pair_lubricateU_poly.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_atomic.cpp > atom_vec_atomic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_partial.cpp > compute_temp_partial.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_buck_coul_long_cs.cpp > pair_buck_coul_long_cs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_brownian.cpp > pair_brownian.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_ramp.cpp > compute_temp_ramp.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_angle.cpp > atom_vec_angle.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_qeq.cpp > fix_qeq.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_body_local.cpp > compute_body_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_adapt.cpp > fix_adapt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_born_coul_msm.cpp > pair_born_coul_msm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_angmom_chunk.cpp > compute_angmom_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_cut.cpp > pair_coul_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_xtc.cpp > dump_xtc.d In file included from ../dump_xtc.cpp:30:0: ../dump_xtc.h:28:21: fatal error: rpc/rpc.h: No such file or directory #include "rpc/rpc.h" ^ compilation terminated. x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_colloid.cpp > pair_colloid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nh_asphere.cpp > fix_nh_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nph_eff.cpp > fix_nph_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_pair_local.cpp > compute_pair_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_com.cpp > compute_temp_com.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_erotate_sphere.cpp > compute_erotate_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_long_dipole_long.cpp > pair_lj_long_dipole_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pppm_stagger.cpp > pppm_stagger.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../improper_class2.cpp > improper_class2.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pppm_tip4p.cpp > pppm_tip4p.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_cluster_atom.cpp > compute_cluster_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_stress_atom.cpp > compute_stress_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../procmap.cpp > procmap.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min_cg.cpp > min_cg.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nph_asphere.cpp > fix_nph_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../velocity.cpp > velocity.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_sna_atom.cpp > compute_sna_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_deform.cpp > compute_temp_deform.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_multi_harmonic.cpp > dihedral_multi_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../write_restart.cpp > write_restart.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_harmonic.cpp > angle_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_vector.cpp > fix_vector.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_full.cpp > neigh_full.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nvt_sphere.cpp > fix_nvt_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neighbor.cpp > neighbor.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lubricateU.cpp > pair_lubricateU.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_temp_rescale.cpp > fix_temp_rescale.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_union.cpp > region_union.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../create_bonds.cpp > create_bonds.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_poems.cpp > fix_poems.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_temp_csld.cpp > fix_temp_csld.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fft3d.cpp > fft3d.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_angle_local.cpp > compute_angle_local.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_property_atom.cpp > compute_property_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_nm_cut_coul_long.cpp > pair_nm_cut_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nph.cpp > fix_rigid_nph.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region.cpp > region.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_smooth.cpp > pair_lj_smooth.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_store_state.cpp > fix_store_state.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_npt_small.cpp > fix_rigid_npt_small.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_reduce.cpp > compute_reduce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_dilatation_atom.cpp > compute_dilatation_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_slice.cpp > compute_slice.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_cna_atom.cpp > compute_cna_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_correlate.cpp > fix_ave_correlate.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_nonlinear.cpp > bond_nonlinear.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../integrate.cpp > integrate.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nvt.cpp > fix_nvt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_expand.cpp > pair_lj_expand.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../tad.cpp > tad.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_intersect.cpp > region_intersect.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair.cpp > pair.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_sphere.cpp > region_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_contact_atom.cpp > compute_contact_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_ke_atom_eff.cpp > compute_ke_atom_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_dsf.cpp > pair_coul_dsf.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_charmm.cpp > dihedral_charmm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../min_quickmin.cpp > min_quickmin.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_molecular.cpp > atom_vec_molecular.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_msd.cpp > compute_msd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_snav_atom.cpp > compute_snav_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_store.cpp > fix_store.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_erotate_asphere.cpp > compute_erotate_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_tip4p_long_opt.cpp > pair_lj_cut_tip4p_long_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_cs.cpp > compute_temp_cs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../improper_hybrid.cpp > improper_hybrid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../timer.cpp > timer.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_com.cpp > compute_com.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_read_restart.cpp > fix_read_restart.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../irregular.cpp > irregular.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve.cpp > fix_nve.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../replicate.cpp > replicate.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_map.cpp > atom_map.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../gridcomm.cpp > gridcomm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_meso_rho_atom.cpp > compute_meso_rho_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neb.cpp > neb.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eam_alloy_opt.cpp > pair_eam_alloy_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../create_atoms.cpp > create_atoms.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_long.cpp > pair_lj_cut_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_small.cpp > fix_rigid_small.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_tip4p_cut.cpp > pair_lj_cut_tip4p_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_bond_break.cpp > fix_bond_break.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_msm.cpp > pair_lj_cut_coul_msm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_gran.cpp > fix_wall_gran.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_respa.cpp > neigh_respa.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../region_cone.cpp > region_cone.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond_harmonic.cpp > bond_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_sphere.cpp > fix_nve_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_move.cpp > fix_move.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dump_xyz.cpp > dump_xyz.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_born_coul_long.cpp > pair_born_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_gauss.cpp > pair_gauss.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_centro_atom.cpp > compute_centro_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_region.cpp > fix_wall_region.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_morse_opt.cpp > pair_morse_opt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_com_chunk.cpp > compute_com_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_atom.cpp > fix_ave_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../dihedral_class2.cpp > dihedral_class2.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_spring_rg.cpp > fix_spring_rg.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_viscosity.cpp > fix_viscosity.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_aveforce.cpp > fix_aveforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_cosine_squared.cpp > angle_cosine_squared.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_meso_e_atom.cpp > compute_meso_e_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_chunk.cpp > fix_ave_chunk.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec.cpp > atom_vec.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_eff.cpp > compute_temp_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_born.cpp > pair_born.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_event.cpp > fix_event.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_cut_soft.cpp > pair_lj_cut_coul_cut_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rattle.cpp > fix_rattle.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_line.cpp > atom_vec_line.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nph_small.cpp > fix_rigid_nph_small.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_limit.cpp > fix_nve_limit.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_msm.cpp > pair_coul_msm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_heat.cpp > fix_heat.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_wolf.cpp > pair_coul_wolf.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_deposit.cpp > fix_deposit.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../msm_cg.cpp > msm_cg.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_spatial.cpp > fix_ave_spatial.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_eam_alloy.cpp > pair_eam_alloy.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sph_lj.cpp > pair_sph_lj.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../group.cpp > group.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nph.cpp > fix_nph.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_region_eff.cpp > compute_temp_region_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../read_dump.cpp > read_dump.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_table.cpp > angle_table.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_damage_atom.cpp > compute_damage_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../comm.cpp > comm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../angle_class2.cpp > angle_class2.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_bond.cpp > atom_vec_bond.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_nb3b_harmonic.cpp > pair_nb3b_harmonic.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_coul_long_soft.cpp > pair_lj_cut_coul_long_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_minimize.cpp > fix_minimize.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_tip4p_long_soft.cpp > pair_lj_cut_tip4p_long_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../random_mars.cpp > random_mars.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_stencil.cpp > neigh_stencil.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall_lj93.cpp > fix_wall_lj93.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_charmm_coul_charmm_implicit.cpp > pair_lj_charmm_coul_charmm_implicit.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nh_small.cpp > fix_rigid_nh_small.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_phonon.cpp > fix_phonon.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_buck_coul_cut.cpp > pair_buck_coul_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj96_cut.cpp > pair_lj96_cut.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_wall.cpp > fix_wall.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../prd.cpp > prd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_bond_create.cpp > fix_bond_create.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_npt_asphere.cpp > fix_npt_asphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../bond.cpp > bond.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_gromacs_coul_gromacs.cpp > pair_lj_gromacs_coul_gromacs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_sph_taitwater.cpp > pair_sph_taitwater.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_temp_sphere.cpp > compute_temp_sphere.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_langevin_eff.cpp > fix_langevin_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../create_box.cpp > create_box.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_born_coul_long_cs.cpp > pair_born_coul_long_cs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_append_atoms.cpp > fix_append_atoms.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_enforce2d.cpp > fix_enforce2d.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_lineforce.cpp > fix_lineforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_srd.cpp > fix_srd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_asphere_noforce.cpp > fix_nve_asphere_noforce.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../input.cpp > input.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_buck_coul_long.cpp > pair_buck_coul_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_meso.cpp > fix_meso.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../write_dump.cpp > write_dump.d In file included from ../style_dump.h:8:0, from ../write_dump.cpp:20: ../dump_xtc.h:28:21: fatal error: rpc/rpc.h: No such file or directory #include "rpc/rpc.h" ^ compilation terminated. x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nve.cpp > fix_rigid_nve.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../lattice.cpp > lattice.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_rdf.cpp > compute_rdf.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_nve_eff.cpp > fix_nve_eff.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_adp.cpp > pair_adp.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_charge.cpp > atom_vec_charge.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_buck.cpp > pair_buck.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_tmd.cpp > fix_tmd.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom_vec_ellipsoid.cpp > atom_vec_ellipsoid.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../math_extra.cpp > math_extra.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../compute_chunk_atom.cpp > compute_chunk_atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_dipole_long.cpp > pair_lj_cut_dipole_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_cut_tip4p_long.cpp > pair_lj_cut_tip4p_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_reax.cpp > pair_reax.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_coul_long_cs.cpp > pair_coul_long_cs.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_hbond_dreiding_morse.cpp > pair_hbond_dreiding_morse.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_gran_hertz_history.cpp > pair_gran_hertz_history.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../atom.cpp > atom.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_charmm_coul_charmm.cpp > pair_lj_charmm_coul_charmm.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../rerun.cpp > rerun.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_deform.cpp > fix_deform.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_airebo.cpp > pair_airebo.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../neigh_list.cpp > neigh_list.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_lj_long_tip4p_long.cpp > pair_lj_long_tip4p_long.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../verlet_split.cpp > verlet_split.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_tip4p_long_soft.cpp > pair_tip4p_long_soft.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../reader_xyz.cpp > reader_xyz.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../displace_atoms.cpp > displace_atoms.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_rigid_nvt.cpp > fix_rigid_nvt.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../fix_ave_histo.cpp > fix_ave_histo.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../image.cpp > image.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../run.cpp > run.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../variable.cpp > variable.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../finish.cpp > finish.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -M ../pair_resquared.cpp > pair_resquared.d x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_resquared.cpp ../pair_resquared.cpp: In member function ‘virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)’: ../pair_resquared.cpp:445:53: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setwell[i],sizeof(int),1,fp); ^ ../pair_resquared.cpp:448:58: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&well[i][0],sizeof(double),3,fp); ^ ../pair_resquared.cpp:452:58: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ ../pair_resquared.cpp:456:52: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ ../pair_resquared.cpp:457:50: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ ../pair_resquared.cpp:458:48: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ ../pair_resquared.cpp: In member function ‘virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)’: ../pair_resquared.cpp:486:43: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ ../pair_resquared.cpp:487:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../finish.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../variable.cpp ../variable.cpp: In member function ‘int LAMMPS_NS::Variable::next(int, char**)’: ../variable.cpp:615:33: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%d",&nextindex); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../run.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../image.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../fix_ave_histo.cpp ../fix_ave_histo.cpp: In member function ‘virtual void LAMMPS_NS::FixAveHisto::end_of_step()’: ../fix_ave_histo.cpp:838:53: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] if (fileend > 0) ftruncate(fileno(fp),fileend); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../fix_rigid_nvt.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../displace_atoms.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../reader_xyz.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_tip4p_long_soft.cpp ../pair_tip4p_long_soft.cpp: In member function ‘virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)’: ../pair_tip4p_long_soft.cpp:452:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ ../pair_tip4p_long_soft.cpp:453:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ ../pair_tip4p_long_soft.cpp:454:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ ../pair_tip4p_long_soft.cpp:455:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ ../pair_tip4p_long_soft.cpp:456:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../verlet_split.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_lj_long_tip4p_long.cpp ../pair_lj_long_tip4p_long.cpp: In member function ‘virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)’: ../pair_lj_long_tip4p_long.cpp:1512:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1513:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1514:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1515:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1516:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1518:46: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1519:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1520:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1521:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1522:44: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ ../pair_lj_long_tip4p_long.cpp:1523:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../neigh_list.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_airebo.cpp ../pair_airebo.cpp: In member function ‘void LAMMPS_NS::PairAIREBO::read_file(char*)’: ../pair_airebo.cpp:3340:26: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3346:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3348:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3350:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3352:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3354:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3356:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3358:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3360:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3362:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3364:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3366:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3368:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3370:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3372:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3374:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3376:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3378:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3380:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3382:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3384:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3386:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3388:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3390:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3392:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3394:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3396:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3398:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3400:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3402:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3404:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3406:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3408:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3410:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3412:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3414:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3416:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3418:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3420:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3422:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3424:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3426:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3428:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3430:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3432:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3437:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3439:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3441:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3443:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3445:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3447:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3449:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3451:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3453:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3455:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3457:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3459:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3461:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3463:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3465:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3467:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3469:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3471:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3473:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3475:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3477:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3482:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3483:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3484:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3488:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3492:26: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3495:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3498:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3502:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3505:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3512:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3513:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3514:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3516:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3520:26: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3524:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3528:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3535:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3536:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3537:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3539:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3544:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3548:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3553:30: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3561:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3562:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3563:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3564:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3569:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3573:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3578:30: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3586:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3587:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3588:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3590:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3595:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3599:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3605:32: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3614:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3615:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3616:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3618:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3623:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3627:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3633:32: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3642:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3643:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3644:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3646:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3651:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3655:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3661:32: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3670:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3671:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3672:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3674:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3679:28: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3683:24: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ ../pair_airebo.cpp:3689:32: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(s,MAXLINE,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../fix_deform.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../rerun.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_lj_charmm_coul_charmm.cpp ../pair_lj_charmm_coul_charmm.cpp: In member function ‘virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)’: ../pair_lj_charmm_coul_charmm.cpp:381:58: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:385:52: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:386:50: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:387:50: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&eps14[i][j],sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:388:52: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&sigma14[i][j],sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp: In member function ‘virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)’: ../pair_lj_charmm_coul_charmm.cpp:442:45: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_inner,sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:443:39: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj,sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:444:47: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul_inner,sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:445:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:446:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ ../pair_lj_charmm_coul_charmm.cpp:447:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../atom.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_gran_hertz_history.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_hbond_dreiding_morse.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_coul_long_cs.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_reax.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_lj_cut_tip4p_long.cpp ../pair_lj_cut_tip4p_long.cpp: In member function ‘virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)’: ../pair_lj_cut_tip4p_long.cpp:527:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeO,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:528:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeH,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:529:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeB,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:530:35: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&typeA,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:531:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&qdist,sizeof(double),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:533:46: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:534:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:535:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:536:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:537:39: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:538:44: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&ncoultablebits,sizeof(int),1,fp); ^ ../pair_lj_cut_tip4p_long.cpp:539:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&tabinner,sizeof(double),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_lj_cut_dipole_long.cpp ../pair_lj_cut_dipole_long.cpp: In member function ‘virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)’: ../pair_lj_cut_dipole_long.cpp:496:58: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ ../pair_lj_cut_dipole_long.cpp:500:45: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&epsilon[i][j],sizeof(double),1,fp); ^ ../pair_lj_cut_dipole_long.cpp:501:43: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&sigma[i][j],sizeof(double),1,fp); ^ ../pair_lj_cut_dipole_long.cpp:502:44: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj[i][j],sizeof(double),1,fp); ^ ../pair_lj_cut_dipole_long.cpp: In member function ‘virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)’: ../pair_lj_cut_dipole_long.cpp:530:46: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_lj_global,sizeof(double),1,fp); ^ ../pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_coul,sizeof(double),1,fp); ^ ../pair_lj_cut_dipole_long.cpp:532:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ ../pair_lj_cut_dipole_long.cpp:533:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../compute_chunk_atom.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../math_extra.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../atom_vec_ellipsoid.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../fix_tmd.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_buck.cpp ../pair_buck.cpp: In member function ‘virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)’: ../pair_buck.cpp:311:58: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ^ ../pair_buck.cpp:315:46: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&a[i][j],sizeof(double),1,fp); ^ ../pair_buck.cpp:316:48: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&rho[i][j],sizeof(double),1,fp); ^ ../pair_buck.cpp:317:46: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&c[i][j],sizeof(double),1,fp); ^ ../pair_buck.cpp:318:48: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ^ ../pair_buck.cpp: In member function ‘virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)’: ../pair_buck.cpp:347:43: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ^ ../pair_buck.cpp:348:41: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&offset_flag,sizeof(int),1,fp); ^ ../pair_buck.cpp:349:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ^ ../pair_buck.cpp:350:39: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&tail_flag,sizeof(int),1,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../atom_vec_charge.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../pair_adp.cpp ../pair_adp.cpp: In member function ‘void LAMMPS_NS::PairADP::read_file(char*)’: ../pair_adp.cpp:564:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ ../pair_adp.cpp:565:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ ../pair_adp.cpp:566:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ ../pair_adp.cpp:567:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ ../pair_adp.cpp:592:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ ../pair_adp.cpp:616:29: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ ../pair_adp.cpp: In member function ‘void LAMMPS_NS::PairADP::grab(FILE*, int, double*)’: ../pair_adp.cpp:928:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(line,MAXLINE,fp); ^ x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../fix_nve_eff.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../compute_rdf.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../lattice.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../fix_rigid_nve.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -I../../src -I. -fPIC -fPIC -I../../lib/voronoi/includelink -I../../lib/reax -I../../lib/poems -I../../lib/meam -I../STUBS -I/usr/include/voro++ -c ../write_dump.cpp In file included from ../style_dump.h:8:0, from ../write_dump.cpp:20: ../dump_xtc.h:28:21: fatal error: rpc/rpc.h: No such file or directory #include "rpc/rpc.h" ^ compilation terminated. make[1]: *** [Makefile:104: write_dump.o] Error 1 make[1]: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src/Obj_shared_serial' make: *** [Makefile:140: serial] Error 2 make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15/src' * ERROR: sci-physics/lammps-20151207::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-physics/lammps-20151207::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-physics/lammps-20151207::gentoo'`. * The complete build log is located at '/var/log/portage/sci-physics:lammps-20151207:20180315-224824.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/lammps-20151207/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-physics/lammps-20151207/temp/environment'. * Working directory: '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15' * S: '/var/tmp/portage/sci-physics/lammps-20151207/work/lammps-7Dec15'