sci-chemistry:avogadro-1.2.0_p20170207:20180303-213317.log

sci-chemistry:avogadro-1.2.0_p20170207:20180303-213317.log (text/plain), 42.83 KB, created by Toralf Förster on 2018-03-03 22:01:10 UTC

 * Package:    sci-chemistry/avogadro-1.2.0_p20170207
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 cpu_flags_x86_sse2 elibc_glibc glsl kernel_linux python python_targets_python2_7 userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Source unpacked in /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work
>>> Preparing source in /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 ...
 * Applying avogadro-1.1.1-mkspecs-dir.patch ...
 [ ok ]
 * Applying avogadro-1.1.1-no-strip.patch ...
 [ ok ]
 * Applying avogadro-1.1.1-pkgconfig_eigen.patch ...
 [ ok ]
 * Applying avogadro-1.1.1-openbabel.patch ...
 [ ok ]
 * Applying avogadro-1.1.1-boost-join-moc.patch ...
 [ ok ]
 * Applying avogadro-1.2.0-numpy.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build"
cmake -C /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DENABLE_THREADEDGL=OFF -DENABLE_RPATH=OFF -DENABLE_UPDATE_CHECKER=OFF -DQT_MKSPECS_DIR=/usr/share/qt4/mkspecs -DWITH_SSE2=yes -DENABLE_GLSL=yes -DENABLE_PYTHON=yes -DENABLE_TESTS=no -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207
loading initial cache file /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/gentoo_common_config.cmake
-- The C compiler identification is GNU 7.3.0
-- The CXX compiler identification is GNU 7.3.0
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The build type is Gentoo
-- Performing Test HAVE_NO_RTTI
-- Performing Test HAVE_NO_RTTI - Success
-- Performing Test HAVE_RTTI
-- Performing Test HAVE_RTTI - Success
-- Performing Test HAVE_GCC_VISIBILITY
-- Performing Test HAVE_GCC_VISIBILITY - Success
-- Performing Test COMPILES_WITHOUT_FPERMISSIVE
-- Performing Test COMPILES_WITHOUT_FPERMISSIVE - Failed
-- Enabling the SSE2 instruction set
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/lib64/qt4/bin/qmake (found suitable version "4.8.7", minimum required is "4.6.0") 
-- Found OpenGL: /usr/lib/libGL.so   
-- Looking for XOpenDisplay in /usr/lib/libX11.so;/usr/lib/libXext.so
-- Looking for XOpenDisplay in /usr/lib/libX11.so;/usr/lib/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /usr/lib/libX11.so
-- Found lupdate: /usr/bin/lupdate
-- Found lrelease: /usr/bin/lrelease
-- Found lconvert: /usr/bin/lconvert
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.11") 
-- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "0.29.2") 
-- Checking for module 'openbabel-2.0>=2.3.0'
--   Found openbabel-2.0, version 2.4.1
-- Found OpenBabel 2.3 or later: openbabel
-- Found OpenBabel2 executable: /usr/bin/babel
-- Found Git revision is: 
-- Building released version.
-- Searching for python dependencies...
-- [1/5] Boost Python
-- Boost version: 1.65.0
-- Found the following Boost libraries:
--   python
-- Boost Python found...
-- [2/5] Python Libraries
-- Found PythonLibs: /usr/lib/libpython2.7.so  
-- [3/5] Python Interpreter
-- Found PythonInterp: /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/temp/python2.7/bin/python (found version "2.7.14") 
-- [4/5] Numpy Module
-- Numpy headers found
-- [5/5] SIP Module
-- SIP version 267015 found
-- Found SIP: /usr/include/python2.7  
-- All python dependencies found - Python support enabled
-- GLEW found and GLSL support enabled
-- Threaded OpenGL rendering not enabled
-- Setting new boost python libraries
failed to create symbolic link '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include/avogadro//var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/config.h': No such file or directory
-- Enabled python terminal
-- Found Qt4: /usr/lib64/qt4/bin/qmake (found suitable version "4.8.7", minimum required is "4.6") 
-- Linking in static plugins: bsdyengine;navigatetool;elementcolor
-- Python site-packages directory: /usr/lib64/python2.7/site-packages
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) 
-- docbook tools not found, doc targets disabled
-- <<< Gentoo configuration >>>
Build type      Gentoo
Install path    /usr
Compiler flags:
C               -O2 -pipe -march=native
C++             -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2
Linker flags:
Executable      -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-O1 -Wl,--as-needed
Module          -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-O1 -Wl,--as-needed
Shared          -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-O1 -Wl,--as-needed

-- Configuring done
CMake Warning (dev) in libavogadro/src/CMakeLists.txt:
  Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link
  interface.  Run "cmake --help-policy CMP0022" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  Target "avogadro" has an INTERFACE_LINK_LIBRARIES property which differs
  from its LINK_INTERFACE_LIBRARIES properties.

  INTERFACE_LINK_LIBRARIES:

    openbabel;/usr/lib64/qt4/libQtOpenGL.so;/usr/lib64/qt4/libQtGui.so;/usr/lib64/qt4/libQtCore.so;/usr/lib/libGL.so;/usr/lib/libGLU.so;/usr/lib/libGLEW.so;/usr/lib/libpython2.7.so;/usr/lib/libboost_python-2.7-mt.so;bsdyengine;navigatetool;elementcolor

  LINK_INTERFACE_LIBRARIES:

    

This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) in libavogadro/src/extensions/surfaces/openqube/CMakeLists.txt:
  Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link
  interface.  Run "cmake --help-policy CMP0022" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  Target "OpenQube" has an INTERFACE_LINK_LIBRARIES property which differs
  from its LINK_INTERFACE_LIBRARIES properties.

  INTERFACE_LINK_LIBRARIES:

    $<$<NOT:$<CONFIG:DEBUG>>:/usr/lib64/qt4/libQtCore.so>;$<$<CONFIG:DEBUG>:/usr/lib64/qt4/libQtCore.so>;$<$<NOT:$<CONFIG:DEBUG>>:/usr/lib64/qt4/libQtGui.so>;$<$<CONFIG:DEBUG>:/usr/lib64/qt4/libQtGui.so>

  LINK_INTERFACE_LIBRARIES:

    

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Generating done
-- Build files have been written to: /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build"
make -j 1 VERBOSE=1 
/usr/bin/cmake -H/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 -B/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/CMakeFiles /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Generating moc_elementcolor.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/moc_elementcolor.cxx_parameters
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/colors /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/CMakeFiles/elementcolor.dir/DependInfo.cmake
Dependee "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/CMakeFiles/elementcolor.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend.internal".
Dependee "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend.internal".
Scanning dependencies of target elementcolor
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/build
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/elementcolor.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/elementcolor.dir/elementcolor.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/colors/elementcolor.cpp
[  0%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors/moc_elementcolor.cxx
[  0%] Linking CXX static library elementcolor.a
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors && /usr/bin/cmake -P CMakeFiles/elementcolor.dir/cmake_clean_target.cmake
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/elementcolor.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-ar qc elementcolor.a  CMakeFiles/elementcolor.dir/elementcolor.cpp.o CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o
/usr/bin/x86_64-pc-linux-gnu-ranlib elementcolor.a
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Built target elementcolor
make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Generating ui_bsdysettingswidget.h
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines && /usr/lib64/qt4/bin/uic -o /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/ui_bsdysettingswidget.h /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/engines/bsdysettingswidget.ui
[  0%] Generating moc_bsdyengine.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/moc_bsdyengine.cxx_parameters
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/engines /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/DependInfo.cmake
Dependee "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend.internal".
Dependee "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend.internal".
Scanning dependencies of target bsdyengine
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/engines/bsdyengine.cpp
[  0%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines/moc_bsdyengine.cxx
[  0%] Linking CXX static library bsdyengine.a
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines && /usr/bin/cmake -P CMakeFiles/bsdyengine.dir/cmake_clean_target.cmake
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/bsdyengine.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-ar qc bsdyengine.a  CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o
/usr/bin/x86_64-pc-linux-gnu-ranlib bsdyengine.a
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Built target bsdyengine
make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Generating qrc_navigatetool.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/lib64/qt4/bin/rcc -name navigatetool -o /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/qrc_navigatetool.cxx /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/tools/navigatetool.qrc
[  0%] Generating moc_navigatetool.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/moc_navigatetool.cxx_parameters
[  0%] Generating ui_navigatesettingswidget.h
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/lib64/qt4/bin/uic -o /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/ui_navigatesettingswidget.h /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/tools/navigatesettingswidget.ui
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207 /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/tools /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/CMakeFiles/navigatetool.dir/DependInfo.cmake
Dependee "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/CMakeFiles/navigatetool.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend.internal".
Dependee "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend.internal".
Scanning dependencies of target navigatetool
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/build
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/navigatetool.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/navigatetool.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/tools/navigatetool.cpp
[  0%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/eyecandy.cpp.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/eyecandy.cpp.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/tools/eyecandy.cpp
[  0%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/moc_navigatetool.cxx
[  0%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/bin/x86_64-pc-linux-gnu-g++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_DEFAULT_SOURCE -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen3 -I/usr/include/python2.7 -I/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools   -DNDEBUG -O2 -pipe -march=native -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -msse2   -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o -c /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools/qrc_navigatetool.cxx
[  0%] Linking CXX static library navigatetool.a
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/bin/cmake -P CMakeFiles/navigatetool.dir/cmake_clean_target.cmake
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/navigatetool.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-ar qc navigatetool.a  CMakeFiles/navigatetool.dir/navigatetool.cpp.o CMakeFiles/navigatetool.dir/eyecandy.cpp.o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o
/usr/bin/x86_64-pc-linux-gnu-ranlib navigatetool.a
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Built target navigatetool
make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
[  0%] Generating qrc_pythontool.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/rcc -name pythontool -o /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/qrc_pythontool.cxx /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/libavogadro/src/pythontool.qrc
[  0%] Generating moc_animation.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_animation.cxx_parameters
[  0%] Generating moc_atom.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_atom.cxx_parameters
[  0%] Generating moc_bond.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_bond.cxx_parameters
[  1%] Generating moc_color.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_color.cxx_parameters
[  1%] Generating moc_colorbutton.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_colorbutton.cxx_parameters
[  1%] Generating moc_cube.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_cube.cxx_parameters
[  1%] Generating moc_dockextension.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_dockextension.cxx_parameters
[  1%] Generating moc_dockwidget.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_dockwidget.cxx_parameters
[  1%] Generating moc_elementdetail_p.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_elementdetail_p.cxx_parameters
[  1%] Generating moc_elementtranslator.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_elementtranslator.cxx_parameters
[  1%] Generating moc_engine.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_engine.cxx_parameters
[  1%] Generating moc_extension.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_extension.cxx_parameters
[  1%] Generating moc_fragment.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_fragment.cxx_parameters
[  2%] Generating moc_glwidget.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_glwidget.cxx_parameters
[  2%] Generating moc_mesh.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_mesh.cxx_parameters
[  2%] Generating moc_meshgenerator.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_meshgenerator.cxx_parameters
[  2%] Generating moc_molecule.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_molecule.cxx_parameters
[  2%] Generating moc_moleculefile.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_moleculefile.cxx_parameters
[  2%] Generating moc_periodictablescene_p.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_periodictablescene_p.cxx_parameters
[  2%] Generating moc_periodictableview.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_periodictableview.cxx_parameters
[  2%] Generating moc_plotwidget.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_plotwidget.cxx_parameters
[  2%] Generating moc_plugin.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_plugin.cxx_parameters
[  3%] Generating moc_pluginmanager.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_pluginmanager.cxx_parameters
[  3%] Generating moc_primitive.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_primitive.cxx_parameters
[  3%] Generating moc_protein.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_protein.cxx_parameters
[  3%] Generating moc_readfilethread_p.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_readfilethread_p.cxx_parameters
[  3%] Generating moc_residue.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_residue.cxx_parameters
[  3%] Generating moc_textmatrixeditor.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_textmatrixeditor.cxx_parameters
[  3%] Generating moc_tool.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_tool.cxx_parameters
[  3%] Generating moc_toolgroup.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_toolgroup.cxx_parameters
[  3%] Generating moc_zmatrix.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_zmatrix.cxx_parameters
[  3%] Generating moc_pythonengine_p.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_pythonengine_p.cxx_parameters
[  4%] Generating moc_pythonerror.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_pythonerror.cxx_parameters
[  4%] Generating moc_pythonextension_p.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_pythonextension_p.cxx_parameters
[  4%] Generating moc_pythontool_p.cxx
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/lib64/qt4/bin/moc @/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/moc_pythontool_p.cxx_parameters
[  4%] Generating libavogadro_ar.qm
cd /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src && /usr/bin/lconvert -i /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207/i18n/libavogadro/ar.po -o /var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build/libavogadro/src/libavogadro_ar.ts
lconvert: could not find a Qt installation of ''
make[2]: *** [libavogadro/src/CMakeFiles/avogadro.dir/build.make:237: libavogadro/src/libavogadro_ar.qm] Error 1
make[2]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
make[1]: *** [CMakeFiles/Makefile2:151: libavogadro/src/CMakeFiles/avogadro.dir/all] Error 2
make[1]: Leaving directory '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
make: *** [Makefile:152: all] Error 2
 * ERROR: sci-chemistry/avogadro-1.2.0_p20170207::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-chemistry/avogadro-1.2.0_p20170207::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-chemistry/avogadro-1.2.0_p20170207::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-chemistry:avogadro-1.2.0_p20170207:20180303-213317.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207_build'
 * S: '/var/tmp/portage/sci-chemistry/avogadro-1.2.0_p20170207/work/avogadro-1.2.0_p20170207'