per-cleaner log

log.txt (text/plain), 20.21 KB, created by Martin Mokrejš on 2018-02-22 21:43:42 UTC

$ perl-cleaner all -- --keep-going --backtrack=30000

***************************************************************************
You are supplying additional command line options for the package manager.
This is NOT RECOMMENDED, not tested, and may lead to incorrect, incomplete,
confusing, and/or nonfunctional results. You are on your own now.
***************************************************************************


 * Removing perl-core packages from world file
 *    emerge --deselect  --keep-going --backtrack=30000 perl-core/File-Path perl-core/File-Temp perl-core/Module-CoreList perl-core/Test-Simple 
!!! Section 'gentoo_prefix' in repos.conf has name different from repository name 'gentoo' set inside repository
>>> No matching atoms found in "world" favorites file...
 * Updating installed Perl virtuals
 *    emerge -u1  --keep-going --backtrack=30000 virtual/perl-CPAN-Meta virtual/perl-CPAN-Meta-YAML virtual/perl-Carp virtual/perl-Compress-Raw-Bzip2 virtual/perl-Compress-Raw-Zlib virtual/perl-DB_File virtual/perl-Data-Dumper virtual/perl-Devel-PPPort virtual/perl-Digest-MD5 virtual/perl-Digest-SHA virtual/perl-Encode virtual/perl-Exporter virtual/perl-ExtUtils-CBuilder virtual/perl-ExtUtils-Constant virtual/perl-ExtUtils-Install virtual/perl-ExtUtils-MakeMaker virtual/perl-ExtUtils-Manifest virtual/perl-ExtUtils-ParseXS virtual/perl-File-Path virtual/perl-File-Spec virtual/perl-File-Temp virtual/perl-Getopt-Long virtual/perl-IO virtual/perl-IO-Compress virtual/perl-IO-Socket-IP virtual/perl-IPC-Cmd virtual/perl-JSON-PP virtual/perl-Locale-Maketext virtual/perl-MIME-Base64 virtual/perl-Math-BigInt virtual/perl-Math-Complex virtual/perl-Module-CoreList virtual/perl-Module-Metadata virtual/perl-Parse-CPAN-Meta virtual/perl-Perl-OSType virtual/perl-Scalar-List-Utils virtual/perl-Storable virtual/perl-Sys-Syslog virtual/perl-Term-ANSIColor virtual/perl-Test-Harness virtual/perl-Test-Simple virtual/perl-Text-Balanced virtual/perl-Text-ParseWords virtual/perl-Text-Tabs+Wrap virtual/perl-Time-HiRes virtual/perl-Time-Local virtual/perl-XSLoader virtual/perl-autodie virtual/perl-if virtual/perl-libnet virtual/perl-parent virtual/perl-podlators virtual/perl-version 
!!! Section 'gentoo_prefix' in repos.conf has name different from repository name 'gentoo' set inside repository

 * IMPORTANT: 1 news items need reading for repository 'science'.
 * IMPORTANT: 16 news items need reading for repository 'gentoo'.
 * Use eselect news read to view new items.

Calculating dependencies... done!
>>> Auto-cleaning packages...

>>> No outdated packages were found on your system.

 * Beginning a clean up of .ph files
 * Excluding files for 5.26.1 and 5.26.1/x86_64-linux-thread-multi from cleaning

 * Locating ph files for removal

 * Locating packages for an update
 * Locating ebuilds linked against libperl
 *   Adding to list: app-editors/vim:0
 *   Adding to list: app-editors/gvim:0
 *   Adding to list: dev-perl/XML-DOM:0
 *   Adding to list: dev-perl/GD:0
 *   Adding to list: dev-perl/LWP-Protocol-https:0
 *   Adding to list: dev-perl/Test-Fatal:0
 *   Adding to list: dev-perl/Package-Stash:0
 *   Adding to list: dev-perl/Text-RecordParser:0
 *   Adding to list: dev-perl/Statistics-Descriptive:0
 *   Adding to list: dev-perl/Tk:0
 *   Adding to list: dev-perl/Test-Warn:0
 *   Adding to list: dev-perl/XML-SAX:0
 *   Adding to list: dev-perl/XML-SAX-Expat:0
 *   Adding to list: dev-perl/XML-Simple:0
 *   Adding to list: dev-perl/Text-Table:0
 *   Adding to list: dev-perl/Net-HTTP:0
 *   Adding to list: dev-perl/libwww-perl:0
 *   Adding to list: dev-perl/SQL-Abstract:0
 *   Adding to list: dev-perl/Moo:0
 *   Adding to list: dev-perl/Config-Any:0
 *   Adding to list: dev-perl/Class-Accessor-Grouped:0
 *   Adding to list: dev-perl/Module-Implementation:0
 *   Adding to list: dev-perl/Text-Autoformat:0
 *   Adding to list: dev-perl/Eval-Closure:0
 *   Adding to list: dev-perl/Specio:0
 *   Adding to list: dev-perl/Params-Validate:0
 *   Adding to list: dev-perl/Sub-Exporter-Progressive:0
 *   Adding to list: dev-perl/Devel-GlobalDestruction:0
 *   Adding to list: dev-perl/DateTime-TimeZone:0
 *   Adding to list: dev-perl/namespace-clean:0
 *   Adding to list: dev-perl/namespace-autoclean:0
 *   Adding to list: dev-perl/DateTime:0
 *   Adding to list: dev-perl/DBIx-Class:0
 *   Adding to list: dev-perl/Cairo:0
 *   Adding to list: dev-perl/DateTime-Format-W3CDTF:0
 *   Adding to list: dev-perl/DateTime-Format-Mail:0
 *   Adding to list: dev-perl/DateTime-Locale:0
 *   Adding to list: dev-perl/File-Which:0
 *   Adding to list: dev-perl/App-pwhich:0
 *   Adding to list: dev-perl/GDGraph:0
 *   Adding to list: dev-perl/GDTextUtil:0
 *   Adding to list: dev-perl/AppConfig:0
 *   Adding to list: dev-perl/Template-Toolkit:0
 *   Adding to list: dev-perl/Dist-CheckConflicts:0
 *   Adding to list: dev-perl/Template-DBI:0
 *   Adding to list: dev-perl/Template-GD:0
 *   Adding to list: dev-perl/Template-XML:0
 *   Adding to list: dev-perl/ExtUtils-PkgConfig:0
 *   Adding to list: dev-perl/Config-Std:0
 *   Adding to list: dev-perl/JSON:0
 *   Adding to list: dev-perl/XML-Twig:0
 *   Adding to list: dev-perl/XML-RSS:0
 *   Adding to list: dev-perl/B-Hooks-EndOfScope:0
 *   Adding to list: dev-perl/Config-IniFiles:0
 *   Adding to list: dev-perl/Data-Page:0
 *   Adding to list: dev-perl/Digest-MD5-File:0
 *   Adding to list: dev-perl/File-DesktopEntry:0
 *   Adding to list: dev-perl/File-HomeDir:0
 *   Adding to list: dev-perl/File-MimeInfo:0
 *   Adding to list: dev-perl/GD-Graph3d:0
 *   Adding to list: dev-perl/GraphViz:0
 *   Adding to list: dev-perl/MLDBM:0
 *   Adding to list: media-gfx/imagemagick:0
 *   Adding to list: media-gfx/graphviz:0
 *   Adding to list: dev-vcs/git:0
 *   Adding to list: sci-biology/Atlas-Link:0
 *   Adding to list: sci-biology/GAL:0
 *   Adding to list: sci-biology/swissknife:0
 *   Adding to list: sci-biology/ONTO-PERL:0
 *   Adding to list: sci-biology/TransDecoder:0
 *   Adding to list: sci-biology/vcftools:0
!!! Section 'gentoo_prefix' in repos.conf has name different from repository name 'gentoo' set inside repository
 * emerge -v1 --backtrack=200 --selective=n --keep-going --backtrack=30000 app-editors/vim:0 app-editors/gvim:0 dev-perl/XML-DOM:0 dev-perl/GD:0 dev-perl/LWP-Protocol-https:0 dev-perl/Test-Fatal:0 dev-perl/Package-Stash:0 dev-perl/Text-RecordParser:0 dev-perl/Statistics-Descriptive:0 dev-perl/Tk:0 dev-perl/Test-Warn:0 dev-perl/XML-SAX:0 dev-perl/XML-SAX-Expat:0 dev-perl/XML-Simple:0 dev-perl/Text-Table:0 dev-perl/Net-HTTP:0 dev-perl/libwww-perl:0 dev-perl/SQL-Abstract:0 dev-perl/Moo:0 dev-perl/Config-Any:0 dev-perl/Class-Accessor-Grouped:0 dev-perl/Module-Implementation:0 dev-perl/Text-Autoformat:0 dev-perl/Eval-Closure:0 dev-perl/Specio:0 dev-perl/Params-Validate:0 dev-perl/Sub-Exporter-Progressive:0 dev-perl/Devel-GlobalDestruction:0 dev-perl/DateTime-TimeZone:0 dev-perl/namespace-clean:0 dev-perl/namespace-autoclean:0 dev-perl/DateTime:0 dev-perl/DBIx-Class:0 dev-perl/Cairo:0 dev-perl/DateTime-Format-W3CDTF:0 dev-perl/DateTime-Format-Mail:0 dev-perl/DateTime-Locale:0 dev-perl/File-Which:0 dev-perl/App-pwhich:0 dev-perl/GDGraph:0 dev-perl/GDTextUtil:0 dev-perl/AppConfig:0 dev-perl/Template-Toolkit:0 dev-perl/Dist-CheckConflicts:0 dev-perl/Template-DBI:0 dev-perl/Template-GD:0 dev-perl/Template-XML:0 dev-perl/ExtUtils-PkgConfig:0 dev-perl/Config-Std:0 dev-perl/JSON:0 dev-perl/XML-Twig:0 dev-perl/XML-RSS:0 dev-perl/B-Hooks-EndOfScope:0 dev-perl/Config-IniFiles:0 dev-perl/Data-Page:0 dev-perl/Digest-MD5-File:0 dev-perl/File-DesktopEntry:0 dev-perl/File-HomeDir:0 dev-perl/File-MimeInfo:0 dev-perl/GD-Graph3d:0 dev-perl/GraphViz:0 dev-perl/MLDBM:0 media-gfx/imagemagick:0 media-gfx/graphviz:0 dev-vcs/git:0 sci-biology/Atlas-Link:0 sci-biology/GAL:0 sci-biology/swissknife:0 sci-biology/ONTO-PERL:0 sci-biology/TransDecoder:0 sci-biology/vcftools:0
!!! Section 'gentoo_prefix' in repos.conf has name different from repository name 'gentoo' set inside repository

 * IMPORTANT: 1 news items need reading for repository 'science'.
 * IMPORTANT: 16 news items need reading for repository 'gentoo'.
 * Use eselect news read to view new items.


These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild     U  ] sci-biology/swissknife-1.73::science [1.72::science] 1606 KiB
[ebuild  N     ] dev-perl/PAR-Dist-0.490.0-r1::gentoo  0 KiB
[ebuild     U  ] dev-perl/Config-IniFiles-2.940.0::gentoo [2.920.0::gentoo] USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/MLDBM-2.50.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Module-Implementation-0.90.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Dist-CheckConflicts-0.110.0::gentoo  USE="{-test}" 0 KiB
[ebuild     U  ] dev-perl/Net-HTTP-6.170.0::gentoo [6.130.0::gentoo] USE="-minimal {-test}" 0 KiB
[ebuild   R    ] dev-perl/Eval-Closure-0.140.0::gentoo  USE="-minimal {-test}" 0 KiB
[ebuild     U  ] dev-perl/Sub-Exporter-Progressive-0.1.13::gentoo [0.1.11::gentoo] 0 KiB
[ebuild   R    ] dev-perl/Test-Fatal-0.14.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild   R    ] dev-perl/Statistics-Descriptive-3.61.200::gentoo  USE="-examples {-test}" 0 KiB
[ebuild   R    ] dev-perl/Test-Warn-0.310.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Text-Table-1.132.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild   R    ] dev-perl/Class-Accessor-Grouped-0.100.120::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Text-Autoformat-1.740.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild   R    ] dev-perl/Config-Std-0.901::science  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Data-Page-2.20.0-r1::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/File-DesktopEntry-0.220.0::gentoo  USE="{-test}" 0 KiB
[ebuild  N     ] dev-perl/JSON-MaybeXS-1.3.9::gentoo  USE="xs {-test}" 0 KiB
[ebuild     U  ] dev-perl/JSON-2.940.0::gentoo [2.900.0::gentoo] USE="xs%* -examples% {-test}" 0 KiB
[ebuild     U  ] dev-perl/Specio-0.420.0::gentoo [0.360.0::gentoo] USE="-minimal {-test}" 0 KiB
[ebuild  N     ] dev-perl/Params-ValidationCompiler-0.260.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild   R    ] dev-perl/Devel-GlobalDestruction-0.140.0::gentoo  0 KiB
[ebuild     U  ] dev-perl/B-Hooks-EndOfScope-0.210.0::gentoo [0.200.0::gentoo] USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Package-Stash-0.370.0::gentoo  USE="-minimal {-test}" 0 KiB
[ebuild     U  ] dev-perl/Params-Validate-1.290.0::gentoo [1.230.0::gentoo] USE="-examples% {-test}" 0 KiB
[ebuild     U  ] dev-perl/Moo-2.3.3::gentoo [2.3.2::gentoo] USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/namespace-clean-0.270.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/namespace-autoclean-0.280.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/SQL-Abstract-1.840.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild     U  ] dev-perl/DateTime-TimeZone-2.130.0::gentoo [2.10.0::gentoo] USE="{-test}" 0 KiB
[ebuild     U  ] dev-perl/DateTime-Locale-1.160.0::gentoo [1.50.0::gentoo] USE="-examples {-test}" 0 KiB
[ebuild     U  ] dev-perl/DateTime-1.440.0::gentoo [1.360.0::gentoo] USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/DateTime-Format-W3CDTF-0.70.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/DateTime-Format-Mail-0.403.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/XML-RSS-1.590.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild     U  ] dev-perl/libwww-perl-6.270.0::gentoo [6.260.0::gentoo] USE="ssl {-test}" 0 KiB
[ebuild   R    ] dev-perl/XML-DOM-1.460.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/LWP-Protocol-https-6.70.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/XML-Twig-3.520.0::gentoo  USE="nls {-test}" 0 KiB
[ebuild   R    ] dev-perl/Digest-MD5-File-0.80.0-r1::gentoo  0 KiB
[ebuild   R   *] sci-biology/Atlas-Link-0.01-r1::science  0 KiB
[ebuild     U  ] dev-perl/File-Which-1.220.0::gentoo [1.210.0::gentoo] USE="pwhich {-test}" 0 KiB
[ebuild     U  ] dev-perl/App-pwhich-1.150.0::gentoo [1.140.0::gentoo] USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/File-HomeDir-1.2.0::gentoo  USE="xdg {-test}" 0 KiB
[ebuild   R    ] dev-perl/AppConfig-1.710.0::gentoo  USE="{-test}" 0 KiB
[ebuild  N     ] dev-perl/Module-Install-1.180.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Text-RecordParser-1.6.5::science  0 KiB
[ebuild   R    ] dev-perl/XML-SAX-0.990.0-r1::gentoo  0 KiB
[ebuild     U  ] dev-perl/ExtUtils-PkgConfig-1.160.0::gentoo [1.150.0::gentoo] 0 KiB
[ebuild  N     ] dev-libs/libpcre2-10.31::gentoo  USE="bzip2 jit readline recursion-limit unicode zlib -libedit -pcre16 -pcre32 -static-libs" 1566 KiB
[ebuild   R    ] dev-perl/File-MimeInfo-0.280.0::gentoo  USE="{-test}" 0 KiB
[ebuild     U  ] dev-perl/GD-2.660.0::gentoo [2.560.0-r2::gentoo] USE="jpeg png truetype -animgif -examples% -fcgi% -gif -xpm" 0 KiB
[ebuild   R    ] dev-perl/XML-SAX-Expat-0.510.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Tk-804.33.0::gentoo  0 KiB
[ebuild   R    ] dev-perl/Cairo-1.106.0::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] media-gfx/imagemagick-7.0.7.21:0/7.0.7.21::gentoo  USE="X bzip2 cxx fontconfig jpeg lcms openmp perl png svg tiff truetype xml zlib -corefonts -djvu -fftw -fpx -graphviz -hdri -jbig -jpeg2k -lqr -lzma -opencl -openexr -pango -postscript -q32 -q8 -raw -static-libs {-test} -webp -wmf" 0 KiB
[ebuild   R    ] dev-perl/XML-Simple-2.220.0::gentoo  USE="{-test}" 0 KiB
[ebuild     U  ] dev-perl/GDTextUtil-0.860.0-r2::gentoo [0.860.0-r1::gentoo] USE="-examples%" 0 KiB
[ebuild   R    ] app-editors/vim-8.0.1428::gentoo  USE="X nls perl python tcl -acl -cscope -debug (-gpm) -lua -luajit -minimal -racket -ruby (-selinux) -terminal -vim-pager" PYTHON_SINGLE_TARGET="python3_5 -python2_7 -python3_4 -python3_6" PYTHON_TARGETS="python2_7 python3_5 -python3_4 -python3_6" 0 KiB
[ebuild   R    ] dev-perl/GDGraph-1.540.0::gentoo  USE="{-test}" 0 KiB
[ebuild     U  ] dev-perl/Config-Any-0.320.0::gentoo [0.300.0::gentoo] USE="conf%* ini%* json xml%* yaml%* {-test} (-minimal%)" 0 KiB
[ebuild   R    ] app-editors/gvim-8.0.1428::gentoo  USE="gtk nls perl python session tcl -acl (-aqua) -cscope -debug -gnome -gtk3 -lua -luajit -motif -neXt -netbeans -racket -ruby (-selinux)" PYTHON_SINGLE_TARGET="python3_5 -python2_7 -python3_4 -python3_6" PYTHON_TARGETS="python2_7 python3_5 -python3_4 -python3_6" 0 KiB
[ebuild   R    ] sci-biology/ONTO-PERL-1.41::science  0 KiB
[ebuild   R    ] dev-perl/DBIx-Class-0.82.840::gentoo  USE="-admin -admin_script -deploy -examples -replicated {-test}" 0 KiB
[ebuild     U  ] dev-perl/GD-Graph3d-0.630.0-r2::gentoo [0.630.0-r1::gentoo] 0 KiB
[ebuild     U  ] dev-vcs/git-2.16.2::gentoo [2.13.0::gentoo] USE="blksha1 cgi curl gpg iconv nls pcre pcre-jit%* perl python threads tk webdav -cvs -doc -emacs -gnome-keyring% -highlight -libressl -mediawiki -mediawiki-experimental (-ppcsha1) -subversion {-test} -xinetd (-libsecret%) (-linguas_bg%) (-linguas_ca%) (-linguas_de%) (-linguas_fr%) (-linguas_is%) (-linguas_it%) (-linguas_ko%) (-linguas_pt_PT%) (-linguas_ru%) (-linguas_sv%) (-linguas_vi%) (-linguas_zh_CN%)" PYTHON_TARGETS="python2_7" 5254 KiB
[ebuild   R    ] sci-biology/TransDecoder-2.1.0::science  0 KiB
[ebuild   R    ] sci-biology/vcftools-0.1.15::science  USE="lapack" 0 KiB
[ebuild   R    ] media-gfx/graphviz-2.40.1-r1::gentoo  USE="X cairo gtk java nls pdf perl python svg tcl -devil -doc -examples -gdk-pixbuf -gts -guile -lasi -postscript -qt5 -ruby -static-libs" PYTHON_TARGETS="python2_7" 0 KiB
[ebuild   R    ] dev-perl/GraphViz-2.240.0::gentoo  USE="-examples {-test}" 0 KiB
[ebuild     U  ] dev-perl/Template-Toolkit-2.270.0-r1::gentoo [2.270.0::gentoo] USE="gd mysql vim-syntax xml -latex -postgres {-test}" 0 KiB
[ebuild     U  ] dev-perl/Template-DBI-2.650.0-r2::gentoo [2.650.0-r1::gentoo] USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Template-GD-2.660.0-r1::gentoo  USE="{-test}" 0 KiB
[ebuild   R    ] dev-perl/Template-XML-2.170.0-r1::gentoo  0 KiB
[ebuild   R   *] sci-biology/GAL-0.2.2::science  0 KiB

Total: 76 packages (23 upgrades, 5 new, 48 reinstalls), Size of downloads: 8425 KiB


>>> Verifying ebuild manifests

>>> Emerging (1 of 76) sci-biology/swissknife-1.73::science
 * Fetching files in the background.
 * To view fetch progress, run in another terminal:
 * tail -f /apps/gentoo/var/log/emerge-fetch.log
>>> Downloading 'http://ftp.fi.muni.cz/pub/linux/gentoo/distfiles/Swissknife_1.73.tar.gz'
--2018-02-22 22:22:52--  http://ftp.fi.muni.cz/pub/linux/gentoo/distfiles/Swissknife_1.73.tar.gz
Resolving ftp.fi.muni.cz... 147.251.48.205
Connecting to ftp.fi.muni.cz|147.251.48.205|:80... connected.
HTTP request sent, awaiting response... 404 Not Found
2018-02-22 22:22:52 ERROR 404: Not Found.

>>> Downloading 'http://gentoo.mirror.web4u.cz/distfiles/Swissknife_1.73.tar.gz'
--2018-02-22 22:22:52--  http://gentoo.mirror.web4u.cz/distfiles/Swissknife_1.73.tar.gz
Resolving gentoo.mirror.web4u.cz... 81.91.81.13
Connecting to gentoo.mirror.web4u.cz|81.91.81.13|:80... connected.
HTTP request sent, awaiting response... 404 Not Found
2018-02-22 22:22:52 ERROR 404: Not Found.

>>> Downloading 'rsync://gentoo.mirror.dkm.cz/gentoo/distfiles/Swissknife_1.73.tar.gz'
receiving incremental file list
rsync: link_stat "/distfiles/Swissknife_1.73.tar.gz" (in gentoo) failed: No such file or directory (2)

sent 8 bytes  received 114 bytes  244.00 bytes/sec
total size is 0  speedup is 0.00
rsync error: some files/attrs were not transferred (see previous errors) (code 23) at main.c(1659) [Receiver=3.1.3]
>>> Downloading 'ftp://gentoo.mirror.web4u.cz/distfiles/Swissknife_1.73.tar.gz'
--2018-02-22 22:22:52--  ftp://gentoo.mirror.web4u.cz/distfiles/Swissknife_1.73.tar.gz
           => '/apps/gentoo/usr/portage/distfiles/Swissknife_1.73.tar.gz'
Resolving gentoo.mirror.web4u.cz... 81.91.81.13
Connecting to gentoo.mirror.web4u.cz|81.91.81.13|:21... failed: Connection refused.
>>> Downloading 'ftp://ftp.ebi.ac.uk/pub/software/swissprot/Swissknife/Swissknife_1.73.tar.gz'
--2018-02-22 22:22:53--  ftp://ftp.ebi.ac.uk/pub/software/swissprot/Swissknife/Swissknife_1.73.tar.gz
           => '/apps/gentoo/usr/portage/distfiles/Swissknife_1.73.tar.gz'
Resolving ftp.ebi.ac.uk... 193.62.192.4
Connecting to ftp.ebi.ac.uk|193.62.192.4|:21... failed: Connection refused.
!!! Couldn't download 'Swissknife_1.73.tar.gz'. Aborting.
 * Fetch failed for 'sci-biology/swissknife-1.73', Log file:
 *  '/apps/gentoo/var/tmp/portage/sci-biology/swissknife-1.73/temp/build.log'

>>> Failed to emerge sci-biology/swissknife-1.73, Log file:

>>>  '/apps/gentoo/var/tmp/portage/sci-biology/swissknife-1.73/temp/build.log'
*** Resuming merge...

These are the packages that would be merged, in order:

Calculating dependencies... done!

 * Messages for package sci-biology/swissknife-1.73:

 * Fetch failed for 'sci-biology/swissknife-1.73', Log file:
 *  '/apps/gentoo/var/tmp/portage/sci-biology/swissknife-1.73/temp/build.log'
 * One or more packages are either masked or have missing dependencies:
 * 
 *   >=dev-lang/perl-5.002:0/5.24= pulled in by:
 *     (sci-biology/swissknife-1.72:0/0::science, installed)
 * 
 *   sys-apps/portage[python_targets_python2_7(-),python_targets_python3_5(-),-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] pulled in by:
 *     (dev-java/java-config-2.2.0-r3:2/2::gentoo, installed)
 * 
 *   dev-lang/perl:0/5.24= pulled in by:
 *     (dev-perl/DBD-SQLite-1.540.0:0/0::gentoo, installed)
 * 
 *   sys-libs/zlib:0/0= pulled in by:
 *     (sys-devel/llvm-3.9.1-r1:0/3.9.1::gentoo, installed)
 * 
 *   app-eselect/eselect-lapack pulled in by:
 *     (sci-libs/lapack-reference-3.7.0:0/0::gentoo, installed)
 * 
 *   app-eselect/eselect-blas pulled in by:
 *     (sci-libs/blas-reference-20161223:0/0::gentoo, installed)
 * 
 *   >=sys-libs/zlib-1.2.3:0/0=[abi_x86_64(-)] pulled in by:
 *     (dev-db/mariadb-10.1.23:0/18::gentoo, installed)
 * 
 * The resume list contains packages that are either masked or have
 * unsatisfied dependencies. Please restart/continue the operation
 * manually, or use --skipfirst to skip the first package in the list and
 * any other packages that may be masked or have missing dependencies.
 * 
 * The following package has failed to build, install, or execute postinst:
 * 
 *  (sci-biology/swissknife-1.73:0/0::science, ebuild scheduled for merge), Log file:
 *   '/apps/gentoo/var/tmp/portage/sci-biology/swissknife-1.73/temp/build.log'
 * 
 * perl-cleaner is stopping here:
 * Fix the problem and start perl-cleaner again.
 * 
 * 
 * Note that upgrading Perl with emerge option --ignore-built-slot-operator-deps=y is not supported.
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