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Gentoo's Bugzilla – Attachment 517488 Details for
Bug 644020
sci-libs/scipy-1.0.0 needs <gcc-7 for libgfortran.so.3 (ImportError: libgfortran.so.3: cannot open shared object file)
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buidl.log
scipy-build.log (text/x-log), 5.30 KB, created by
Andrew Ammerlaan
on 2018-02-01 20:31:27 UTC
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Description:
buidl.log
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Creator:
Andrew Ammerlaan
Created:
2018-02-01 20:31:27 UTC
Size:
5.30 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: sci-libs/scipy-1.0.0 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: sci@gentoo.org >[32;01m * [39;49;00mUSE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 userland_GNU >[32;01m * [39;49;00mFEATURES: preserve-libs sandbox splitdebug userpriv usersandbox > [32;01m*[0m Using following Fortran compiler: > [32;01m*[0m F77: x86_64-pc-linux-gnu-gfortran > [32;01m*[0m FC: x86_64-pc-linux-gnu-gfortran >>>> Unpacking source... >>>> Unpacking scipy-1.0.0.tar.gz to /var/tmp/portage/sci-libs/scipy-1.0.0/work >>>> Source unpacked in /var/tmp/portage/sci-libs/scipy-1.0.0/work >>>> Preparing source in /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0 ... >Package cblas was not found in the pkg-config search path. >Perhaps you should add the directory containing `cblas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'cblas' found >Package cblas was not found in the pkg-config search path. >Perhaps you should add the directory containing `cblas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'cblas' found >Package cblas was not found in the pkg-config search path. >Perhaps you should add the directory containing `cblas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'cblas' found > [32;01m*[0m Will copy sources from /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0 > [32;01m*[0m python3_5: copying to /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0-python3_5 > [32;01m*[0m python2_7: copying to /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0-python2_7 > [32;01m*[0m python3_6: copying to /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0-python3_6 >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0 ... > [32;01m*[0m python2_7: running distutils-r1_run_phase python_compile >scipy/linalg/_generate_pyx.py: all files up-to-date >Traceback (most recent call last): > File "scipy/special/_generate_pyx.py", line 404, in <module> > import numpy > File "/usr/lib64/python2.7/site-packages/numpy/__init__.py", line 142, in <module> > from . import add_newdocs > File "/usr/lib64/python2.7/site-packages/numpy/add_newdocs.py", line 13, in <module> > from numpy.lib import add_newdoc > File "/usr/lib64/python2.7/site-packages/numpy/lib/__init__.py", line 19, in <module> > from .polynomial import * > File "/usr/lib64/python2.7/site-packages/numpy/lib/polynomial.py", line 20, in <module> > from numpy.linalg import eigvals, lstsq, inv > File "/usr/lib64/python2.7/site-packages/numpy/linalg/__init__.py", line 51, in <module> > from .linalg import * > File "/usr/lib64/python2.7/site-packages/numpy/linalg/linalg.py", line 30, in <module> > from numpy.linalg import lapack_lite, _umath_linalg >ImportError: libgfortran.so.3: cannot open shared object file: No such file or directory >Running scipy/special/_generate_pyx.py >Running scipy/linalg/_generate_pyx.py >Traceback (most recent call last): > File "tools/cythonize.py", line 265, in <module> > main() > File "tools/cythonize.py", line 261, in main > find_process_files(root_dir) > File "tools/cythonize.py", line 228, in find_process_files > for result in pool.imap(lambda fn: process_generate_pyx(fn, lock), jobs): > File "/usr/lib64/python2.7/multiprocessing/pool.py", line 673, in next > raise value >RuntimeError: Running scipy/special/_generate_pyx.py failed > [31;01m*[0m ERROR: sci-libs/scipy-1.0.0::gentoo failed (compile phase): > [31;01m*[0m (no error message) > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 124: Called src_compile > [31;01m*[0m environment, line 4150: Called distutils-r1_src_compile > [31;01m*[0m environment, line 1208: Called _distutils-r1_run_foreach_impl 'python_compile' > [31;01m*[0m environment, line 393: Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 3596: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 2737: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 2735: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 858: Called distutils-r1_run_phase 'python_compile' > [31;01m*[0m environment, line 1201: Called python_compile > [31;01m*[0m environment, line 3183: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m ${EPYTHON} tools/cythonize.py || die; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/scipy-1.0.0::gentoo'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/scipy-1.0.0::gentoo'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/scipy-1.0.0/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-1.0.0/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0-python2_7' > [31;01m*[0m S: '/var/tmp/portage/sci-libs/scipy-1.0.0/work/scipy-1.0.0'
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bug 644020
: 517488 |
517490
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517492