* Package: sci-astronomy/casacore-2.3.0-r1 * Repository: gentoo * Maintainer: sci-astronomy@gentoo.org * USE: abi_x86_64 amd64 c++11 data elibc_glibc kernel_linux openmp python python_targets_python2_7 python_targets_python3_4 threads userland_GNU * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran >>> Unpacking source... >>> Unpacking casacore-2.3.0.tar.gz to /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work >>> Source unpacked in /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work >>> Preparing source in /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0 ... * Applying casacore-2.3.0-disable-class-and-collaboration-graph-generation.patch ... [ ok ] * Applying casacore-2.3.0-disable-known-test-failures.patch ... [ ok ] * Applying casacore-2.3.0-disable-tests-that-require-data-tables.patch ... [ ok ] * Applying casacore-2.3.0-do-not-install-test-and-demonstration-executables.patch ... [ ok ] * Applying casacore-2.3.0-fix-FTBFS-tStatisticsUtilities-tLatticeStatistics-and-tLC.patch ... [ ok ] * Applying casacore-2.3.0-fix-too-small-int-type-for-memory-on-32-bit-machines.patch ... [ ok ] * Applying casacore-2.3.0-loose-some-tests-tFFTServer-tests.patch ... [ ok ] * Applying casacore-2.3.0-make-the-check-for-NFS-a-bit-more-portable-BSD.patch ... [ ok ] * Applying casacore-2.3.0-use-the-correct-symbol-to-detect-Linux-OS.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0 ... * python2_7: running python_set_options * python3_4: running python_set_options >>> Working in BUILD_DIR: "/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build" cmake -C /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DENABLE_SHARED=ON -DBUILD_PYTHON=OFF -DDATA_DIR=/usr/share/casa/data -DBUILD_TESTING=no -DCXX11=yes -DUSE_FFTW3=no -DUSE_HDF5=no -DUSE_OPENMP=yes -DUSE_THREADS=yes -DPYTHON2_EXECUTABLE=/usr/bin/python2.7 -DBUILD_PYTHON=ON -DPYTHON3_EXECUTABLE=/usr/bin/python3.4 -DBUILD_PYTHON3=ON -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build/gentoo_toolchain.cmake /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0 loading initial cache file /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build/gentoo_common_config.cmake -- The C compiler identification is GNU 6.3.0 -- The CXX compiler identification is GNU 6.3.0 -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ -- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- The Fortran compiler identification is GNU 6.3.0 -- Check for working Fortran compiler: /usr/bin/x86_64-pc-linux-gnu-gfortran -- Check for working Fortran compiler: /usr/bin/x86_64-pc-linux-gnu-gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /usr/bin/x86_64-pc-linux-gnu-gfortran supports Fortran 90 -- Checking whether /usr/bin/x86_64-pc-linux-gnu-gfortran supports Fortran 90 -- yes -- Namespace casacore 'merged' into namespace casa. -- Performing Test HAS_CXX11 -- Performing Test HAS_CXX11 - Success -- Performing Test HAS_GXX_FORTRAN_RULES -- Performing Test HAS_GXX_FORTRAN_RULES - Success -- Performing Test HAS_GCC_FORTRAN_RULES -- Performing Test HAS_GCC_FORTRAN_RULES - Success -- Looking for pread -- Looking for pread - found -- Looking for pwrite -- Looking for pwrite - found -- Found Readline: /usr/lib/libreadline.so -- Could NOT find SOFA (missing: SOFA_LIBRARY) -- Found FLEX: /usr/bin/flex -- Found BISON: /usr/bin/bison -- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "0.29.2") -- Checking for module 'blas' -- Found blas, version 3.7.0 -- Found BLAS: /usr/lib/libblas.so -- Checking for module 'lapack' -- Found lapack, version 3.7.0 -- Found LAPACK: /usr/lib/liblapack.so;/usr/lib/libblas.so -- Found CFITSIO: /usr/lib/libcfitsio.so (found suitable version "3.410", minimum required is "3.030") -- Found WCSLIB: /usr/lib/libwcs.so (found suitable version "5.16", minimum required is "4.7") -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindOpenMP.cmake:179 (if): if given arguments: "TRUE" An argument named "TRUE" appears in a conditional statement. Policy CMP0012 is not set: if() recognizes numbers and boolean constants. Run "cmake --help-policy CMP0012" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/share/cmake/Modules/FindOpenMP.cmake:224 (_OPENMP_GET_SPEC_DATE) CMakeLists.txt:417 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindOpenMP.cmake:179 (if): if given arguments: "TRUE" An argument named "TRUE" appears in a conditional statement. Policy CMP0012 is not set: if() recognizes numbers and boolean constants. Run "cmake --help-policy CMP0012" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/share/cmake/Modules/FindOpenMP.cmake:266 (_OPENMP_GET_SPEC_DATE) CMakeLists.txt:417 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Try OpenMP Fortran flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindOpenMP.cmake:179 (if): if given arguments: "TRUE" An argument named "TRUE" appears in a conditional statement. Policy CMP0012 is not set: if() recognizes numbers and boolean constants. Run "cmake --help-policy CMP0012" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/share/cmake/Modules/FindOpenMP.cmake:305 (_OPENMP_GET_SPEC_DATE) CMakeLists.txt:417 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenMP: -fopenmp -- Found Pthreads: /usr/lib/libpthread.so CMake Warning (dev) at msfits/CMakeLists.txt:29 (add_subdirectory): The source directory /var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0/msfits/apps does not contain a CMakeLists.txt file. CMake does not support this case but it used to work accidentally and is being allowed for compatibility. Policy CMP0014 is not set: Input directories must have CMakeLists.txt. Run "cmake --help-policy CMP0014" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for python2 specific environment... -- Found PythonInterp: /usr/bin/python2.7 (found suitable version "2.7.13", minimum required is "2") CMake Error at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:137 (message): Could NOT find PythonLibs (missing: PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) (Required is at least version "2") Call Stack (most recent call first): /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:377 (_FPHSA_FAILURE_MESSAGE) /usr/share/cmake/Modules/FindPythonLibs.cmake:275 (FIND_PACKAGE_HANDLE_STANDARD_ARGS) cmake/FindPython.cmake:49 (find_package) python/CMakeLists.txt:23 (find_package) -- Configuring incomplete, errors occurred! See also "/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build/CMakeFiles/CMakeOutput.log". * ERROR: sci-astronomy/casacore-2.3.0-r1::gentoo failed (configure phase): * cmake failed * * Call stack: * ebuild.sh, line 115: Called src_configure * environment, line 4393: Called cmake-utils_src_configure * environment, line 1268: Called die * The specific snippet of code: * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; * * If you need support, post the output of `emerge --info '=sci-astronomy/casacore-2.3.0-r1::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-astronomy/casacore-2.3.0-r1::gentoo'`. * The complete build log is located at '/var/log/portage/sci-astronomy:casacore-2.3.0-r1:20170708-085153.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/temp/environment'. * Working directory: '/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0_build' * S: '/var/tmp/portage/sci-astronomy/casacore-2.3.0-r1/work/casacore-2.3.0'