dev-haskell:shuffle-0.1.3.3:20170307-184653.log

dev-haskell:shuffle-0.1.3.3:20170307-184653.log (text/plain), 12.77 KB, created by Toralf Förster on 2017-03-07 18:52:41 UTC

 * Package:    dev-haskell/shuffle-0.1.3.3
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux network-uri userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking shuffle-0.1.3.3.tar.gz to /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work
>>> Source unpacked in /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work
>>> Preparing source in /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work/shuffle-0.1.3.3 ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work/shuffle-0.1.3.3 ...
 * Using cabal-1.24.2.0.
 * Prepending /usr/lib64/ghc-8.0.2 to LD_LIBRARY_PATH
/usr/bin/ghc -package Cabal-1.24.2.0 --make /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work/shuffle-0.1.3.3/Setup.hs -j1 +RTS -A256M -qb0 -RTS -threaded -dynamic -o setup
[1 of 1] Compiling Main             ( /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work/shuffle-0.1.3.3/Setup.hs, /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work/shuffle-0.1.3.3/Setup.o )
Linking setup ...
./setup configure --ghc --prefix=/usr --with-compiler=/usr/bin/ghc --with-hc-pkg=/usr/bin/ghc-pkg --prefix=/usr --libdir=/usr/lib64 --libsubdir=shuffle-0.1.3.3/ghc-8.0.2 --datadir=/usr/share/ --datasubdir=shuffle-0.1.3.3/ghc-8.0.2 --ghc-options=-j1 +RTS -A256M -qb0 -RTS --with-ar=x86_64-pc-linux-gnu-ar --ghc-option=-optc-O2 --ghc-option=-optc-pipe --ghc-option=-optc-march=native --ghc-option=-optc-Wall --ghc-option=-optl-Wl,-O1 --ghc-option=-optl-Wl,--as-needed --disable-executable-stripping --docdir=/usr/share/doc/shuffle-0.1.3.3 --verbose --enable-shared --enable-executable-dynamic --sysconfdir=/etc --disable-library-stripping --flags=network-uri
Configuring shuffle-0.1.3.3...
Flags chosen: network-uri=True
Dependency Cabal >=1.14: using Cabal-1.24.2.0
Dependency array >=0.4: using array-0.5.1.1
Dependency base ==4.*: using base-4.9.1.0
Dependency containers >=0.4: using containers-0.5.7.1
Dependency directory >=1.1: using directory-1.3.0.0
Dependency filepath >=1.2: using filepath-1.4.1.1
Dependency network >=2.6: using network-2.6.3.1
Dependency network-uri >=2.6: using network-uri-2.6.1.0
Dependency process >=1.1: using process-1.4.3.0
Dependency shuffle >=0.1.3.3: using shuffle-0.1.3.3
Dependency uhc-util >=0.1.5.5: using uhc-util-0.1.6.7
Dependency uuagc >=0.9.40.3: using uuagc-0.9.52.1
Dependency uuagc-cabal >=1.0.3.0: using uuagc-cabal-1.0.6.0
Dependency uulib >=0.9: using uulib-0.9.22
Using Cabal-1.24.2.0 compiled by ghc-8.0
Using compiler: ghc-8.0.2
Using install prefix: /usr
Binaries installed in: /usr/bin
Libraries installed in: /usr/lib64/shuffle-0.1.3.3/ghc-8.0.2
Dynamic libraries installed in: /usr/lib64/x86_64-linux-ghc-8.0.2
Private binaries installed in: /usr/libexec
Data files installed in: /usr/share/shuffle-0.1.3.3/ghc-8.0.2
Documentation installed in: /usr/share/doc/shuffle-0.1.3.3
Configuration files installed in: /etc
Using alex version 3.2.1 found on system at: /usr/bin/alex
Using ar given by user at: /usr/bin/x86_64-pc-linux-gnu-ar
Using c2hs version 0.27.1 found on system at: /usr/bin/c2hs
Using cpphs version 1.20.2 found on system at: /usr/bin/cpphs
Using gcc version 5.4.0 found on system at: /usr/bin/x86_64-pc-linux-gnu-gcc
Using ghc version 8.0.2 given by user at: /usr/bin/ghc
Using ghc-pkg version 8.0.2 given by user at: /usr/bin/ghc-pkg
No ghcjs found
No ghcjs-pkg found
No greencard found
Using haddock version 2.17.3 found on system at: /usr/bin/haddock
Using happy version 1.19.5 found on system at: /usr/bin/happy
Using haskell-suite found on system at: haskell-suite-dummy-location
Using haskell-suite-pkg found on system at: haskell-suite-pkg-dummy-location
No hmake found
Using hpc version 0.67 found on system at: /usr/bin/hpc
Using hsc2hs version 0.68.1 found on system at: /usr/bin/hsc2hs
Using hscolour version 1.24 found on system at: /usr/bin/HsColour
No jhc found
Using ld found on system at: /usr/bin/x86_64-pc-linux-gnu-ld
No lhc found
No lhc-pkg found
Using pkg-config version 0.29.1 found on system at: /usr/bin/pkg-config
Using strip version 2.27 found on system at: /usr/bin/strip
Using tar found on system at: /bin/tar
No uhc found
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/work/shuffle-0.1.3.3 ...
./setup build
Building shuffle-0.1.3.3...
Preprocessing library shuffle-0.1.3.3...
[UUAGC] processing: src/UHC/Shuffle/AspectExpr.ag generating:
dist/build/UHC/Shuffle/AspectExpr.hs
[UUAGC] processing: src/UHC/Shuffle/AspectExprEval.ag generating:
dist/build/UHC/Shuffle/AspectExprEval.hs
[UUAGC] processing: src/UHC/Shuffle/CDoc.ag generating:
dist/build/UHC/Shuffle/CDoc.hs
[UUAGC] processing: src/UHC/Shuffle/CDocSubst.ag generating:
dist/build/UHC/Shuffle/CDocSubst.hs
[UUAGC] processing: src/UHC/Shuffle/CDocInline.ag generating:
dist/build/UHC/Shuffle/CDocInline.hs
[UUAGC] processing: src/UHC/Shuffle/MainAG.ag generating:
dist/build/UHC/Shuffle/MainAG.hs
[ 1 of 12] Compiling UHC.Shuffle.Version ( src/UHC/Shuffle/Version.hs, dist/build/UHC/Shuffle/Version.o )
[ 2 of 12] Compiling UHC.Shuffle.AspectExpr ( dist/build/UHC/Shuffle/AspectExpr.hs, dist/build/UHC/Shuffle/AspectExpr.o )
[ 3 of 12] Compiling UHC.Shuffle.AspectExprEval ( dist/build/UHC/Shuffle/AspectExprEval.hs, dist/build/UHC/Shuffle/AspectExprEval.o )
[ 4 of 12] Compiling UHC.Shuffle.Common ( src/UHC/Shuffle/Common.hs, dist/build/UHC/Shuffle/Common.o )
[ 5 of 12] Compiling UHC.Shuffle.CDoc ( dist/build/UHC/Shuffle/CDoc.hs, dist/build/UHC/Shuffle/CDoc.o )
[ 6 of 12] Compiling UHC.Shuffle.CDocCommon ( src/UHC/Shuffle/CDocCommon.hs, dist/build/UHC/Shuffle/CDocCommon.o )
[ 7 of 12] Compiling UHC.Shuffle.CDocInline ( dist/build/UHC/Shuffle/CDocInline.hs, dist/build/UHC/Shuffle/CDocInline.o )
[ 8 of 12] Compiling UHC.Shuffle.CDocSubst ( dist/build/UHC/Shuffle/CDocSubst.hs, dist/build/UHC/Shuffle/CDocSubst.o )
[ 9 of 12] Compiling UHC.Shuffle.MainAG ( dist/build/UHC/Shuffle/MainAG.hs, dist/build/UHC/Shuffle/MainAG.o )
[10 of 12] Compiling UHC.Shuffle.ChunkParser ( src/UHC/Shuffle/ChunkParser.hs, dist/build/UHC/Shuffle/ChunkParser.o )

src/UHC/Shuffle/ChunkParser.hs:69:10: warning: [-Wmissing-methods]
    • No explicit implementation for
        either ‘compare’ or ‘<=’
    • In the instance declaration for ‘Ord ScState’
[11 of 12] Compiling UHC.Shuffle      ( src/UHC/Shuffle.hs, dist/build/UHC/Shuffle.o )
[12 of 12] Compiling Distribution.Simple.Shuffle ( src/Distribution/Simple/Shuffle.hs, dist/build/Distribution/Simple/Shuffle.o )
Preprocessing executable 'shuffle' for shuffle-0.1.3.3...
[1 of 1] Compiling Main             ( src-main/Main.hs, dist/build/shuffle/shuffle-tmp/Main.dyn_o )
Linking dist/build/shuffle/shuffle ...
>>> Source compiled.
>>> Test phase [not enabled]: dev-haskell/shuffle-0.1.3.3

>>> Install shuffle-0.1.3.3 into /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/image/ category dev-haskell
./setup copy --destdir=/var/tmp/portage/dev-haskell/shuffle-0.1.3.3/image/
Installing library in
/var/tmp/portage/dev-haskell/shuffle-0.1.3.3/image/usr/lib64/shuffle-0.1.3.3/ghc-8.0.2
Installing executable(s) in
/var/tmp/portage/dev-haskell/shuffle-0.1.3.3/image/usr/bin
Warning: The directory
/var/tmp/portage/dev-haskell/shuffle-0.1.3.3/image/usr/bin is not in the
system search path.
Creating package registration file:
/var/tmp/portage/dev-haskell/shuffle-0.1.3.3/temp/shuffle-0.1.3.3.conf
Reading package info from stdin ... done.
shuffle-0.1.3.3: Warning: library-dirs: /usr/lib64/shuffle-0.1.3.3/ghc-8.0.2 doesn't exist or isn't a directory
shuffle-0.1.3.3: Warning: haddock-interfaces: /usr/share/doc/shuffle-0.1.3.3/html/shuffle.haddock doesn't exist or isn't a file
shuffle-0.1.3.3: Warning: haddock-html: /usr/share/doc/shuffle-0.1.3.3/html doesn't exist or isn't a directory
shuffle-0.1.3.3: dependency "Cabal-1.24.2.0" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "array-0.5.1.1" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "base-4.9.1.0" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "containers-0.5.7.1" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "directory-1.3.0.0" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "filepath-1.4.1.1" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "network-2.6.3.1-ABFtZSq90Z9BfMXNiqgBoe" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "network-uri-2.6.1.0-IF1bimkvFVT43DNm7zUfiW" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "process-1.4.3.0" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "uhc-util-0.1.6.7-8B7rh04pbjVEcbfj1g2oVe" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "uuagc-0.9.52.1-4qTkHezV9FCuwf4cYxOHm" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "uuagc-cabal-1.0.6.0-H8NC5o3SDZA4aagPqivvK6" doesn't exist (ignoring)
shuffle-0.1.3.3: dependency "uulib-0.9.22-FUKxRE9pNKo9lZ78nG3Dog" doesn't exist (ignoring)
shuffle-0.1.3.3: import-dirs: /usr/lib64/shuffle-0.1.3.3/ghc-8.0.2 doesn't exist or isn't a directory (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle.hi","UHC/Shuffle.p_hi","UHC/Shuffle.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/Version.hi","UHC/Shuffle/Version.p_hi","UHC/Shuffle/Version.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["Distribution/Simple/Shuffle.hi","Distribution/Simple/Shuffle.p_hi","Distribution/Simple/Shuffle.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/AspectExpr.hi","UHC/Shuffle/AspectExpr.p_hi","UHC/Shuffle/AspectExpr.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/AspectExprEval.hi","UHC/Shuffle/AspectExprEval.p_hi","UHC/Shuffle/AspectExprEval.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/Common.hi","UHC/Shuffle/Common.p_hi","UHC/Shuffle/Common.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/CDoc.hi","UHC/Shuffle/CDoc.p_hi","UHC/Shuffle/CDoc.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/CDocCommon.hi","UHC/Shuffle/CDocCommon.p_hi","UHC/Shuffle/CDocCommon.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/CDocSubst.hi","UHC/Shuffle/CDocSubst.p_hi","UHC/Shuffle/CDocSubst.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/CDocInline.hi","UHC/Shuffle/CDocInline.p_hi","UHC/Shuffle/CDocInline.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/ChunkParser.hi","UHC/Shuffle/ChunkParser.p_hi","UHC/Shuffle/ChunkParser.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["UHC/Shuffle/MainAG.hi","UHC/Shuffle/MainAG.p_hi","UHC/Shuffle/MainAG.dyn_hi"] (ignoring)
shuffle-0.1.3.3: cannot find any of ["libHSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK.a","libHSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK.p_a","libHSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK-ghc8.0.2.so","libHSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK-ghc8.0.2.dylib","HSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK-ghc8.0.2.dll"] on library path (ignoring)
WARNING: cache is out of date: /usr/lib64/ghc-8.0.2/package.conf.d.initial/package.cache
ghc will see an old view of this package db. Use 'ghc-pkg recache' to fix.
>>> Completed installing shuffle-0.1.3.3 into /var/tmp/portage/dev-haskell/shuffle-0.1.3.3/image/

 * Final size of build directory: 11436 KiB
 * Final size of installed tree: 6100 KiB

strip: x86_64-pc-linux-gnu-strip --strip-unneeded -R .comment -R .GCC.command.line -R .note.gnu.gold-version
   usr/lib64/shuffle-0.1.3.3/ghc-8.0.2/libHSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK.a
   usr/lib64/x86_64-linux-ghc-8.0.2/libHSshuffle-0.1.3.3-HktBtu8F30CLuex06JuWkK-ghc8.0.2.so
   usr/bin/shuffle
ecompressdir: bzip2 -9 /usr/share/doc
 * checking 30 files for package collisions
 * This package will overwrite one or more files that may belong to other
 * packages (see list below). You can use a command such as `portageq
 * owners / <filename>` to identify the installed package that owns a
 * file. If portageq reports that only one package owns a file then do
 * NOT file a bug report. A bug report is only useful if it identifies at
 * least two or more packages that are known to install the same file(s).
 * If a collision occurs and you can not explain where the file came from
 * then you should simply ignore the collision since there is not enough
 * information to determine if a real problem exists. Please do NOT file
 * a bug report at https://bugs.gentoo.org/ unless you report exactly
 * which two packages install the same file(s). See
 * https://wiki.gentoo.org/wiki/Knowledge_Base:Blockers for tips on how
 * to solve the problem. And once again, please do NOT file a bug report
 * unless you have completely understood the above message.
 * 
 * Detected file collision(s):
 * 
 * 	/usr/bin/shuffle
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * sci-biology/hmmer-2.3.2-r4:2::gentoo
 * 	/usr/bin/shuffle
 * 
 * Package 'dev-haskell/shuffle-0.1.3.3' NOT merged due to file
 * collisions. If necessary, refer to your elog messages for the whole
 * content of the above message.