* Package: dev-python/pytables-3.3.0  * Repository: gentoo  * Maintainer: python@gentoo.org sci@gentoo.org  * USE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_4 userland_GNU  * FEATURES: preserve-libs sandbox test userpriv usersandbox >>> Unpacking source... >>> Unpacking tables-3.3.0.tar.gz to /var/tmp/portage/dev-python/pytables-3.3.0/work >>> Source unpacked in /var/tmp/portage/dev-python/pytables-3.3.0/work >>> Preparing source in /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0 ... >>> Source configured. >>> Compiling source in /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0 ... * python2_7: running distutils-r1_run_phase python_compile /usr/bin/python2.7 setup.py build warning: tables/utilsextension.pyx:802:12: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: tables/utilsextension.pyx:802:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. * Using Python 2.7.12 (default, Dec 1 2016, 03:29:04) * USE_PKGCONFIG: True * Found HDF5 headers at ``/usr/include``, library at ``/usr/lib``. * Found LZO 2 headers at ``/usr/include``, library at ``/usr/lib64``. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, library at ``/usr/lib64``. .. WARNING:: Could not find the bzip2 runtime. The bzip2 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found blosc headers at ``/usr/include``, library at ``/usr/lib64``. Compiling tables/utilsextension.pyx because it changed. Cythonizing tables/utilsextension.pyx Compiling tables/hdf5extension.pyx because it changed. Cythonizing tables/hdf5extension.pyx Compiling tables/tableextension.pyx because it changed. Cythonizing tables/tableextension.pyx Compiling tables/linkextension.pyx because it changed. Cythonizing tables/linkextension.pyx Compiling tables/_comp_lzo.pyx because it changed. Cythonizing tables/_comp_lzo.pyx Compiling tables/_comp_bzip2.pyx because it changed. Cythonizing tables/_comp_bzip2.pyx Compiling tables/lrucacheextension.pyx because it changed. Cythonizing tables/lrucacheextension.pyx Compiling tables/indexesextension.pyx because it changed. Cythonizing tables/indexesextension.pyx running build running build_py creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/leaf.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/carray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/link.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/utils.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/idxutils.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/table.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/index.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/filters.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/expression.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/group.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/req_versions.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/exceptions.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/flavor.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/file.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/undoredo.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/vlarray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/path.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/attributeset.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/array.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/registry.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/atom.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/conditions.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/unimplemented.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/node.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/indexes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/description.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/earray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables copying tables/parameters.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/scripts copying tables/scripts/ptrepack.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/scripts copying tables/scripts/ptdump.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/scripts copying tables/scripts/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/scripts copying tables/scripts/pt2to3.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/scripts copying tables/scripts/pttree.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/scripts creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_tablesMD.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_types.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_all.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_vlarray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_indexes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_expression.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/common.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_timetype.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_earray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_queries.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_numpy.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_nestedtypes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_create.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_do_undo.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_index_backcompat.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_backcompat.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_carray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_indexvalues.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_garbage.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_basics.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_lists.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_tables.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_hdf5compat.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/check_leaks.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_attributes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_array.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/create_backcompat_indexes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_aux.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_enum.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_links.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_tree.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes copying tables/nodes/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes copying tables/nodes/filenode.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/misc copying tables/misc/proxydict.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/misc copying tables/misc/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/misc copying tables/misc/enum.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/misc creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes/tests copying tables/tests/indexes_2_1.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/idx-std-1.x.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/blosc_bigendian.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/python2.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/vlstr_attr.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_i64le.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/non-chunked-table.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/scalar.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_f64le.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/indexes_2_0.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_i32be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/elink.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_i64be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/slink.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/attr-u16.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_szip.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/issue_368.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/elink2.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/bug-idx.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/python3.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/float.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_enum.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/vlunicode_endian.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/Tables_lzo1.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/array_mdatom.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_f64be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/issue_560.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/smpl_i32le.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/Tables_lzo2.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/ex-noattr.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/times-nested-be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_ref_array2.mat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/test_ref_array1.mat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/tests/matlab_file.mat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests copying tables/nodes/tests/test_filenode.dat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/nodes/tests warning: build_py: byte-compiling is disabled, skipping. running build_ext building 'tables.utilsextension' extension creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7 creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/utilsextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/utilsextension.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:259: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_16_dump_h5_backtrace’: tables/utilsextension.c:3927:57: warning: passing argument 3 of ‘H5Ewalk2’ from incompatible pointer type __pyx_t_2 = ((H5Ewalk(H5E_DEFAULT, H5E_WALK_DOWNWARD, __pyx_f_6tables_14utilsextension_e_walk_cb, ((void *)__pyx_v_bt)) < 0) != 0); ^ In file included from /usr/include/hdf5.h:28:0, from tables/utilsextension.c:261: /usr/include/H5Epublic.h:171:15: note: expected ‘H5E_walk2_t’ but argument is of type ‘herr_t (*)(unsigned int, struct H5E_error2_t *, void *)’ H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/utils.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/utils.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/include/python2.7/Python.h:8:0, from src/utils.h:1, from src/H5ARRAY.c:4: /usr/include/python2.7/pyconfig.h:1193:0: warning: "_POSIX_C_SOURCE" redefined #define _POSIX_C_SOURCE 200112L ^ In file included from /usr/include/H5public.h:37:0, from /usr/include/hdf5.h:24, from src/H5ATTR.h:19, from src/H5ARRAY.c:1: /usr/include/features.h:225:0: note: this is the location of the previous definition # define _POSIX_C_SOURCE 200809L ^ In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ATTR.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ATTR.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c hdf5-blosc/src/blosc_filter.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src/blosc_filter.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/utilsextension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/utils.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ATTR.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib64 -lhdf5 -lblosc -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/utilsextension.so building 'tables.hdf5extension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/hdf5extension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/hdf5extension.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:258: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/utils.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/utils.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/typeconv.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/typeconv.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/include/python2.7/Python.h:8:0, from src/utils.h:1, from src/H5ARRAY.c:4: /usr/include/python2.7/pyconfig.h:1193:0: warning: "_POSIX_C_SOURCE" redefined #define _POSIX_C_SOURCE 200112L ^ In file included from /usr/include/H5public.h:37:0, from /usr/include/hdf5.h:24, from src/H5ATTR.h:19, from src/H5ARRAY.c:1: /usr/include/features.h:225:0: note: this is the location of the previous definition # define _POSIX_C_SOURCE 200809L ^ In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY-opt.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5VLARRAY.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5VLARRAY.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/include/python2.7/Python.h:8:0, from src/utils.h:1, from src/H5VLARRAY.c:3: /usr/include/python2.7/pyconfig.h:1193:0: warning: "_POSIX_C_SOURCE" redefined #define _POSIX_C_SOURCE 200112L ^ In file included from /usr/include/H5public.h:37:0, from /usr/include/hdf5.h:24, from src/H5ATTR.h:19, from src/H5VLARRAY.c:1: /usr/include/features.h:225:0: note: this is the location of the previous definition # define _POSIX_C_SOURCE 200809L ^ In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ATTR.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ATTR.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c hdf5-blosc/src/blosc_filter.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src/blosc_filter.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/hdf5extension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/utils.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/typeconv.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY-opt.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5VLARRAY.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ATTR.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib64 -lhdf5 -lblosc -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/hdf5extension.so building 'tables.tableextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/tableextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/tableextension.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:259: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/utils.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/utils.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/typeconv.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/typeconv.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5TB-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5TB-opt.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ATTR.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ATTR.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c hdf5-blosc/src/blosc_filter.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src/blosc_filter.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/tableextension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/utils.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/typeconv.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5TB-opt.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ATTR.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib64 -lhdf5 -lblosc -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tableextension.so building 'tables._comp_lzo' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/_comp_lzo.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/_comp_lzo.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5Zlzo.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5Zlzo.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/_comp_lzo.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5Zlzo.o -L/usr/lib64 -lhdf5 -llzo2 -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/_comp_lzo.so building 'tables._comp_bzip2' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/_comp_bzip2.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/_comp_bzip2.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5Zbzip2.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5Zbzip2.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/_comp_bzip2.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5Zbzip2.o -L/usr/lib64 -lhdf5 -lbz2 -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/_comp_bzip2.so building 'tables.linkextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/linkextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/linkextension.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:258: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/linkextension.o -L/usr/lib64 -lhdf5 -lblosc -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/linkextension.so building 'tables.lrucacheextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/lrucacheextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/lrucacheextension.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:258: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/lrucacheextension.o -L/usr/lib64 -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/lrucacheextension.so building 'tables.indexesextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c tables/indexesextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/indexesextension.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:258: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY-opt.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fno-strict-aliasing -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/idx-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/idx-opt.o -O2 -pipe -fno-strict-aliasing -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/include/python2.7/Python.h:8:0, from src/idx-opt.h:1, from src/idx-opt.c:2: /usr/include/python2.7/pyconfig.h:1193:0: warning: "_POSIX_C_SOURCE" redefined #define _POSIX_C_SOURCE 200112L ^ In file included from /usr/include/stdio.h:27:0, from src/idx-opt.c:1: /usr/include/features.h:225:0: note: this is the location of the previous definition # define _POSIX_C_SOURCE 200809L ^ In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -fno-strict-aliasing /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/tables/indexesextension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/H5ARRAY-opt.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/temp.linux-x86_64-2.7/src/idx-opt.o -L/usr/lib64 -lhdf5 -lblosc -lpython2.7 -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/indexesextension.so * python3_4: running distutils-r1_run_phase python_compile /usr/bin/python3.4 setup.py build * Using Python 3.4.5 (default, Dec 1 2016, 03:26:39) * USE_PKGCONFIG: True * Found HDF5 headers at ``/usr/include``, library at ``/usr/lib``. * Found LZO 2 headers at ``/usr/include``, library at ``/usr/lib64``. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, library at ``/usr/lib64``. .. WARNING:: Could not find the bzip2 runtime. The bzip2 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found blosc headers at ``/usr/include``, library at ``/usr/lib64``. running build running build_py creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/leaf.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/carray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/link.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/utils.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/idxutils.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/table.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/index.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/filters.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/expression.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/group.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/req_versions.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/exceptions.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/flavor.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/file.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/undoredo.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/vlarray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/path.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/attributeset.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/array.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/registry.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/atom.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/conditions.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/unimplemented.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/node.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/indexes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/description.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/earray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables copying tables/parameters.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/scripts copying tables/scripts/ptrepack.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/scripts copying tables/scripts/ptdump.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/scripts copying tables/scripts/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/scripts copying tables/scripts/pt2to3.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/scripts copying tables/scripts/pttree.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/scripts creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_tablesMD.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_types.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_all.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_vlarray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_indexes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_expression.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/common.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_timetype.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_earray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_queries.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_numpy.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_nestedtypes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_create.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_do_undo.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_index_backcompat.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_backcompat.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_carray.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_indexvalues.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_garbage.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_basics.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_lists.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_tables.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_hdf5compat.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/check_leaks.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_attributes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_array.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/create_backcompat_indexes.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_aux.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_enum.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_links.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_tree.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes copying tables/nodes/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes copying tables/nodes/filenode.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/misc copying tables/misc/proxydict.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/misc copying tables/misc/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/misc copying tables/misc/enum.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/misc creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes/tests copying tables/tests/indexes_2_1.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/idx-std-1.x.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/blosc_bigendian.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/python2.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/vlstr_attr.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_i64le.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/non-chunked-table.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/scalar.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_f64le.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/indexes_2_0.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_i32be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/elink.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_i64be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/slink.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/attr-u16.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_szip.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/issue_368.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/elink2.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/bug-idx.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/python3.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/float.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_enum.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/vlunicode_endian.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/Tables_lzo1.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/array_mdatom.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_f64be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/issue_560.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/smpl_i32le.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/Tables_lzo2.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/ex-noattr.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/times-nested-be.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_ref_array2.mat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/test_ref_array1.mat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/tests/matlab_file.mat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tests copying tables/nodes/tests/test_filenode.dat -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/nodes/tests warning: build_py: byte-compiling is disabled, skipping. running build_ext building 'tables.utilsextension' extension creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4 creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc creating /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/utilsextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/utilsextension.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:259: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_16_dump_h5_backtrace’: tables/utilsextension.c:3927:57: warning: passing argument 3 of ‘H5Ewalk2’ from incompatible pointer type __pyx_t_2 = ((H5Ewalk(H5E_DEFAULT, H5E_WALK_DOWNWARD, __pyx_f_6tables_14utilsextension_e_walk_cb, ((void *)__pyx_v_bt)) < 0) != 0); ^ In file included from /usr/include/hdf5.h:28:0, from tables/utilsextension.c:261: /usr/include/H5Epublic.h:171:15: note: expected ‘H5E_walk2_t’ but argument is of type ‘herr_t (*)(unsigned int, struct H5E_error2_t *, void *)’ H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/utils.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/utils.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ARRAY.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ATTR.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ATTR.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c hdf5-blosc/src/blosc_filter.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src/blosc_filter.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/utilsextension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/utils.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ATTR.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src/blosc_filter.o -L/usr/lib64 -lhdf5 -lblosc -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/utilsextension.cpython-34m.so building 'tables.hdf5extension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/hdf5extension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/hdf5extension.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:258: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/utils.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/utils.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/typeconv.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/typeconv.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ARRAY.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ARRAY-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY-opt.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5VLARRAY.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5VLARRAY.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ATTR.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ATTR.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c hdf5-blosc/src/blosc_filter.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src/blosc_filter.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/hdf5extension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/utils.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/typeconv.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY-opt.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5VLARRAY.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ATTR.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src/blosc_filter.o -L/usr/lib64 -lhdf5 -lblosc -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/hdf5extension.cpython-34m.so building 'tables.tableextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/tableextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/tableextension.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:259: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/utils.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/utils.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/typeconv.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/typeconv.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5TB-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5TB-opt.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ATTR.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ATTR.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c hdf5-blosc/src/blosc_filter.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src/blosc_filter.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/tableextension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/utils.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/typeconv.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5TB-opt.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ATTR.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/hdf5-blosc/src/blosc_filter.o -L/usr/lib64 -lhdf5 -lblosc -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/tableextension.cpython-34m.so building 'tables._comp_lzo' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/_comp_lzo.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/_comp_lzo.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5Zlzo.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5Zlzo.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/_comp_lzo.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5Zlzo.o -L/usr/lib64 -lhdf5 -llzo2 -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/_comp_lzo.cpython-34m.so building 'tables._comp_bzip2' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/_comp_bzip2.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/_comp_bzip2.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5Zbzip2.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5Zbzip2.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/_comp_bzip2.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5Zbzip2.o -L/usr/lib64 -lhdf5 -lbz2 -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/_comp_bzip2.cpython-34m.so building 'tables.linkextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/linkextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/linkextension.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:258: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/linkextension.o -L/usr/lib64 -lhdf5 -lblosc -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/linkextension.cpython-34m.so building 'tables.lrucacheextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/lrucacheextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/lrucacheextension.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:258: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/lrucacheextension.o -L/usr/lib64 -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/lrucacheextension.cpython-34m.so building 'tables.indexesextension' extension x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c tables/indexesextension.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/indexesextension.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:258: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/H5ARRAY-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY-opt.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 x86_64-pc-linux-gnu-gcc -O2 -pipe -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib64/python3.4/site-packages/numpy/core/include -I/usr/include/python3.4m -c src/idx-opt.c -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/idx-opt.o -O2 -pipe -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib64/python3.4/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ x86_64-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/tables/indexesextension.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/H5ARRAY-opt.o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/temp.linux-x86_64-3.4/src/idx-opt.o -L/usr/lib64 -lhdf5 -lblosc -lpython3.4m -o /var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python3_4/lib/tables/indexesextension.cpython-34m.so >>> Source compiled. >>> Test phase: dev-python/pytables-3.3.0 * python2_7: running distutils-r1_run_phase python_test -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= PyTables version: 3.3.0 HDF5 version: 1.8.17 NumPy version: 1.10.4 Numexpr version: 2.6.1 (not using Intel's VML/MKL) Zlib version: 1.2.8 (in Python interpreter) LZO version: 2.08 (Jun 29 2014) BZIP2 version: 1.0.6 (6-Sept-2010) Blosc version: 1.11.1 (2016-09-03) Blosc compressors: blosclz (1.0.5), lz4 (1.7.1), lz4hc (1.7.1), snappy (unknown), zlib (1.2.8) Blosc filters: shuffle, bitshuffle Cython version: 0.22 Python version: 2.7.12 (default, Dec 1 2016, 03:29:04) [GCC 4.9.3] Platform: Linux-4.4.6-gentoo-x86_64-Intel-R-_Core-TM-_i5-2520M_CPU_@_2.50GHz-with-gentoo-2.2 Byte-ordering: little Detected cores: 4 Default encoding: ascii Default FS encoding: UTF-8 Default locale: (en_US, UTF-8) -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= Performing only a light (yet comprehensive) subset of the test suite. If you want a more complete test, try passing the --heavy flag to this script (or set the 'heavy' parameter in case you are using tables.test() call). The whole suite will take more than 4 hours to complete on a relatively modern CPU and around 512 MB of main memory. -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= Traceback (most recent call last): File "tables/tests/test_all.py", line 142, in unittest.main(defaultTest='tables.tests.suite') File "/usr/lib64/python2.7/unittest/main.py", line 94, in __init__ self.parseArgs(argv) File "/usr/lib64/python2.7/unittest/main.py", line 149, in parseArgs self.createTests() File "/usr/lib64/python2.7/unittest/main.py", line 158, in createTests self.module) File "/usr/lib64/python2.7/unittest/loader.py", line 130, in loadTestsFromNames suites = [self.loadTestsFromName(name, module) for name in names] File "/usr/lib64/python2.7/unittest/loader.py", line 115, in loadTestsFromName test = obj() File "/var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests/test_all.py", line 71, in suite __import__(name) File "/var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests/test_create.py", line 662, in class FiltersCaseBloscZstd(FiltersTreeTestCase): File "/var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/tests/test_create.py", line 663, in FiltersCaseBloscZstd filters = Filters(shuffle=False, complevel=1, complib="blosc:zstd") File "/var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib/tables/filters.py", line 326, in __init__ % (complib, ", ".join(all_complibs))) ValueError: compression library ``blosc:zstd`` is not supported; it must be one of: zlib, lzo, bzip2, blosc, blosc:blosclz, blosc:lz4, blosc:lz4hc, blosc:snappy, blosc:zlib * ERROR: dev-python/pytables-3.3.0::gentoo failed (test phase): * (no error message) * * Call stack: * ebuild.sh, line 115: Called src_test * environment, line 2647: Called distutils-r1_src_test * environment, line 824: Called _distutils-r1_run_foreach_impl 'python_test' * environment, line 315: Called python_foreach_impl 'distutils-r1_run_phase' 'python_test' * environment, line 2144: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test' * environment, line 1447: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test' * environment, line 1445: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_test' * environment, line 515: Called distutils-r1_run_phase 'python_test' * environment, line 756: Called python_test * environment, line 2526: Called die * The specific snippet of code: * ${EPYTHON} tables/tests/test_all.py || die * * If you need support, post the output of `emerge --info '=dev-python/pytables-3.3.0::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-python/pytables-3.3.0::gentoo'`. * The complete build log is located at '/var/tmp/portage/dev-python/pytables-3.3.0/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-python/pytables-3.3.0/temp/environment'. * Working directory: '/var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0-python2_7/lib' * S: '/var/tmp/portage/dev-python/pytables-3.3.0/work/tables-3.3.0'