dev-python:pyamg-3.0.2:20161010-234254.log

dev-python:pyamg-3.0.2:20161010-234254.log (text/plain), 14.59 KB, created by Toralf Förster on 2016-10-11 08:50:20 UTC

 * Package:    dev-python/pyamg-3.0.2
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_4 userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking pyamg-3.0.2.tar.gz to /var/tmp/portage/dev-python/pyamg-3.0.2/work
>>> Source unpacked in /var/tmp/portage/dev-python/pyamg-3.0.2/work
>>> Preparing source in /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2 ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2 ...
 * python2_7: running distutils-r1_run_phase distutils-r1_python_compile
/usr/bin/python2.7 setup.py build
Running from pyamg source directory.
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/src.linux-x86_64-2.7
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/src.linux-x86_64-2.7/pyamg
building extension "pyamg.amg_core._amg_core" sources
building data_files sources
build_src: building npy-pkg config files
running build_py
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/version.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/strength.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/multilevel.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/info.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/graph.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/blackbox.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying pyamg/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
copying /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/src.linux-x86_64-2.7/pyamg/__config__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/tentative.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/smooth.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/rootnode.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/aggregation.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/aggregate.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/adaptive.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
copying pyamg/aggregation/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/aggregation
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
copying pyamg/classical/split.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
copying pyamg/classical/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
copying pyamg/classical/interpolate.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
copying pyamg/classical/cr.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
copying pyamg/classical/classical.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
copying pyamg/classical/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/classical
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/stencil.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/random_sparse.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/mesh.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/laplacian.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/info.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/example.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/elasticity.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/diffusion.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/demo.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
copying pyamg/gallery/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/gallery
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/info.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_steepest_descent.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_minimal_residual.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_gmres_mgs.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_gmres_householder.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_gmres.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_fgmres.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_cr.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_cgnr.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_cgne.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_cg.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/_bicgstab.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
copying pyamg/krylov/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/krylov
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/amg_core
copying pyamg/amg_core/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/amg_core
copying pyamg/amg_core/amg_core.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/amg_core
copying pyamg/amg_core/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/amg_core
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
copying pyamg/relaxation/smoothing.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
copying pyamg/relaxation/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
copying pyamg/relaxation/relaxation.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
copying pyamg/relaxation/info.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
copying pyamg/relaxation/chebyshev.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
copying pyamg/relaxation/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/relaxation
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/testing
copying pyamg/testing/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/testing
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
copying pyamg/util/utils.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
copying pyamg/util/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
copying pyamg/util/linalg.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
copying pyamg/util/info.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
copying pyamg/util/BSR_utils.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
copying pyamg/util/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/util
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/vis
copying pyamg/vis/vtk_writer.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/vis
copying pyamg/vis/vis_coarse.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/vis
copying pyamg/vis/setup.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/vis
copying pyamg/vis/info.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/vis
copying pyamg/vis/__init__.py -> /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/vis
warning: build_py: byte-compiling is disabled, skipping.

running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
building 'pyamg.amg_core._amg_core' extension
compiling C++ sources
C compiler: x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe -fPIC

creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/temp.linux-x86_64-2.7
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/temp.linux-x86_64-2.7/pyamg
creating /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/temp.linux-x86_64-2.7/pyamg/amg_core
compile options: '-D__STDC_FORMAT_MACROS=1 -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-pc-linux-gnu-g++: pyamg/amg_core/amg_core_wrap.cxx
x86_64-pc-linux-gnu-g++ -shared -Wl,-O1 -Wl,--as-needed -Werror=terminate -march=native -O2 -pipe /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/temp.linux-x86_64-2.7/pyamg/amg_core/amg_core_wrap.o -L/usr/lib64 -lpython2.7 -o /var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2-python2_7/lib/pyamg/amg_core/_amg_core.so
 * python3_4: running distutils-r1_run_phase distutils-r1_python_compile
/usr/bin/python3.4 setup.py build
Running from pyamg source directory.
Traceback (most recent call last):
  File "setup.py", line 212, in <module>
    setup_package()
  File "setup.py", line 204, in setup_package
    configuration=configuration)
  File "/usr/lib64/python3.4/site-packages/numpy/distutils/core.py", line 135, in setup
    config = configuration()
  File "setup.py", line 167, in configuration
    config.add_subpackage('pyamg')
  File "/usr/lib64/python3.4/site-packages/numpy/distutils/misc_util.py", line 1000, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python3.4/site-packages/numpy/distutils/misc_util.py", line 969, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python3.4/site-packages/numpy/distutils/misc_util.py", line 882, in _get_configuration_from_setup_py
    ('.py', 'U', 1))
  File "/usr/lib64/python3.4/site-packages/numpy/compat/py3k.py", line 112, in npy_load_module
    return importlib.machinery.SourceFileLoader(name, fn).load_module()
AttributeError: 'module' object has no attribute 'machinery'
 * ERROR: dev-python/pyamg-3.0.2::gentoo failed (compile phase):
 *   (no error message)
 * 
 * Call stack:
 *     ebuild.sh, line  133:  Called src_compile
 *   environment, line 2602:  Called distutils-r1_src_compile
 *   environment, line  762:  Called _distutils-r1_run_foreach_impl 'distutils-r1_python_compile'
 *   environment, line  321:  Called python_foreach_impl 'distutils-r1_run_phase' 'distutils-r1_python_compile'
 *   environment, line 2135:  Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile'
 *   environment, line 1443:  Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile'
 *   environment, line 1441:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'distutils-r1_python_compile'
 *   environment, line  512:  Called distutils-r1_run_phase 'distutils-r1_python_compile'
 *   environment, line  753:  Called distutils-r1_python_compile
 *   environment, line  628:  Called esetup.py 'build'
 *   environment, line 1006:  Called die
 * The specific snippet of code:
 *       "${@}" || die "${die_args[@]}";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/pyamg-3.0.2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/pyamg-3.0.2::gentoo'`.
 * The complete build log is located at '/var/log/portage/dev-python:pyamg-3.0.2:20161010-234254.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-python/pyamg-3.0.2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/pyamg-3.0.2/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2'
 * S: '/var/tmp/portage/dev-python/pyamg-3.0.2/work/pyamg-3.0.2'