sci-physics:lammps-20160407:20160930-211924.log

sci-physics:lammps-20160407:20160930-211924.log (text/plain), 24.44 KB, created by Toralf Förster on 2016-09-30 21:22:09 UTC

 * Package:    sci-physics/lammps-20160407
 * Repository: gentoo
 * Maintainer: [e-mail] [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux mpi python python_targets_python2_7 python_targets_python3_4 userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
 * Using following Fortran compiler:
 *   F77: x86_64-pc-linux-gnu-gfortran
 *   FC:  x86_64-pc-linux-gnu-gfortran
>>> Unpacking source...
>>> Unpacking lammps-7Apr16.tar.gz to /var/tmp/portage/sci-physics/lammps-20160407/work
>>> Source unpacked in /var/tmp/portage/sci-physics/lammps-20160407/work
>>> Preparing source in /var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16 ...
 * Applying lammps-python3-r2.patch ...
 [ ok ]
 * Applying python-shebang.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16 ...
 * Activating lammps packages...
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-asphere 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package asphere
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-body 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package body
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-class2 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package class2
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-colloid 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package colloid
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-coreshell 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package coreshell
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-dipole 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package dipole
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-fld 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Package fld does not exist
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-granular 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package granular
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-kspace 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package kspace
  updating package CORESHELL
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-manybody 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package manybody
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-mc 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package mc
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-meam 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package meam
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-misc 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package misc
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-user-atc 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package user-atc
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-molecule 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package molecule
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-opt 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package opt
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-peri 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package peri
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-poems 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package poems
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-qeq 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package qeq
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-reax 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package reax
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-replica 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package replica
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-rigid 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package rigid
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-shock 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package shock
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-snap 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package snap
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-srd 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package srd
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-user-eff 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package user-eff
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-user-fep 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package user-fep
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-user-lb 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package user-lb
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-user-phonon 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package user-phonon
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-user-sph 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package user-sph
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-voronoi 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package voronoi
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C src yes-xtc 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
Installing package xtc
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/src'
 * Building packages...
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C lib/meam -j1 -f Makefile.gfortran 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/meam'
mpif90 -O2 -pipe -c meam_data.F
mpif90 -O2 -pipe -c meam_setup_done.F
mpif90 -O2 -pipe -c meam_setup_global.F
mpif90 -O2 -pipe -c meam_setup_param.F
mpif90 -O2 -pipe -c meam_dens_init.F
mpif90 -O2 -pipe -c meam_dens_final.F
mpif90 -O2 -pipe -c meam_force.F
mpif90 -O2 -pipe -c meam_cleanup.F
x86_64-pc-linux-gnu-ar rv libmeam.a meam_data.o meam_setup_done.o meam_setup_global.o meam_setup_param.o meam_dens_init.o meam_dens_final.o meam_force.o meam_cleanup.o
x86_64-pc-linux-gnu-ar: creating libmeam.a
a - meam_data.o
a - meam_setup_done.o
a - meam_setup_global.o
a - meam_setup_param.o
a - meam_dens_init.o
a - meam_dens_final.o
a - meam_force.o
a - meam_cleanup.o
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/meam'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C lib/poems -f Makefile.g++ 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/poems'
mpic++ -march=native -O2 -pipe -I../../src -I. -c workspace.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c system.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c poemsobject.cpp
poemsobject.cpp: In constructor ‘POEMSObject::POEMSObject()’:
poemsobject.cpp:24:23: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   ChangeName("unnamed");
                       ^
mpic++ -march=native -O2 -pipe -I../../src -I. -c body.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c rigidbody.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c particle.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c inertialframe.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c joint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c revolutejoint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c prismaticjoint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c sphericaljoint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c freebodyjoint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c body23joint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c mixedjoint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c point.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c fixedpoint.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c solver.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c onsolver.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c onfunctions.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c onbody.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c virtualmatrix.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c matrix.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c matrixfun.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c mat3x3.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c virtualcolmatrix.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c colmatrix.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c vect3.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c virtualrowmatrix.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c rowmatrix.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c mat6x6.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c vect6.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c fastmatrixops.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c colmatmap.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c eulerparameters.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c vect4.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c norm.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c mat4x4.cpp
mpic++ -march=native -O2 -pipe -I../../src -I. -c poemstreenode.cpp
x86_64-pc-linux-gnu-ar rv libpoems.a workspace.o system.o poemsobject.o body.o rigidbody.o particle.o inertialframe.o joint.o revolutejoint.o prismaticjoint.o sphericaljoint.o freebodyjoint.o body23joint.o mixedjoint.o point.o fixedpoint.o solver.o onsolver.o onfunctions.o onbody.o virtualmatrix.o matrix.o matrixfun.o mat3x3.o virtualcolmatrix.o colmatrix.o vect3.o virtualrowmatrix.o rowmatrix.o mat6x6.o vect6.o fastmatrixops.o colmatmap.o eulerparameters.o vect4.o norm.o mat4x4.o poemstreenode.o
x86_64-pc-linux-gnu-ar: creating libpoems.a
a - workspace.o
a - system.o
a - poemsobject.o
a - body.o
a - rigidbody.o
a - particle.o
a - inertialframe.o
a - joint.o
a - revolutejoint.o
a - prismaticjoint.o
a - sphericaljoint.o
a - freebodyjoint.o
a - body23joint.o
a - mixedjoint.o
a - point.o
a - fixedpoint.o
a - solver.o
a - onsolver.o
a - onfunctions.o
a - onbody.o
a - virtualmatrix.o
a - matrix.o
a - matrixfun.o
a - mat3x3.o
a - virtualcolmatrix.o
a - colmatrix.o
a - vect3.o
a - virtualrowmatrix.o
a - rowmatrix.o
a - mat6x6.o
a - vect6.o
a - fastmatrixops.o
a - colmatmap.o
a - eulerparameters.o
a - vect4.o
a - norm.o
a - mat4x4.o
a - poemstreenode.o
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/poems'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C lib/reax -j1 -f Makefile.gfortran 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/reax'
mpif90 -O2 -pipe -c reax_connect.F
mpif90 -O2 -pipe -c reax_inout.F
mpif90 -O2 -pipe -c reax_lammps.F
mpif90 -O2 -pipe -c reax_poten.F
mpif90 -O2 -pipe -c reax_reac.F
mpif90 -O2 -pipe -c reax_charges.F
x86_64-pc-linux-gnu-ar rv libreax.a reax_connect.o reax_inout.o reax_lammps.o reax_poten.o reax_reac.o reax_charges.o
x86_64-pc-linux-gnu-ar: creating libreax.a
a - reax_connect.o
a - reax_inout.o
a - reax_lammps.o
a - reax_poten.o
a - reax_reac.o
a - reax_charges.o
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/reax'
make -j1 ARCHIVE=x86_64-pc-linux-gnu-ar CC=mpic++ F90=mpif90 LINK=mpic++ 'CCFLAGS=-march=native -O2 -pipe -I../../src -I.' 'F90FLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,--as-needed' LMP_INC= MPI_INC= MPI_PATH= MPI_LIB= 'user-atc_SYSLIB=-lblas -llapack -lblas' -C lib/atc -f Makefile.g++ 
make: Entering directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/atc'
mpic++ -march=native -O2 -pipe -I../../src -I. -c GhostManager.cpp
In file included from DenseVector.h:4:0,
                 from ParDenseMatrix.h:6,
                 from MatrixLibrary.h:5,
                 from GhostManager.h:5,
                 from GhostManager.cpp:2:
Vector.h: In function ‘ATC_matrix::DenseMatrix<T> ATC_matrix::operator/(const ATC_matrix::Vector<T>&, T)’:
Vector.h:122:3: error: return-statement with no value, in function returning ‘ATC_matrix::DenseMatrix<T>’ [-fpermissive]
   return ;
   ^~~~~~
make: *** [Makefile.g++:40: GhostManager.o] Error 1
make: Leaving directory '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16/lib/atc'
 * ERROR: sci-physics/lammps-20160407::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-physics/lammps-20160407::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-physics/lammps-20160407::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-physics:lammps-20160407:20160930-211924.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/lammps-20160407/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-physics/lammps-20160407/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16'
 * S: '/var/tmp/portage/sci-physics/lammps-20160407/work/lammps-7Apr16'