config.log

config.log (text/plain), 51.11 KB, created by Toralf Förster on 2016-09-26 07:45:13 UTC

This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by ESPResSo configure 3.3.1, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  $ ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/espresso-3.3.1 --htmldir=/usr/share/doc/espresso-3.3.1/html --libdir=/usr/lib64 --with-fftw --without-cuda --with-python-interface --without-mpi --without-tk --with-x

## --------- ##
## Platform. ##
## --------- ##

hostname = mr-fox
uname -m = x86_64
uname -r = 4.7.4-hardened-r1
uname -s = Linux
uname -v = #1 SMP Thu Sep 22 18:21:40 CEST 2016

/usr/bin/uname -p = Intel(R) Core(TM) i7-3930K CPU @ 3.20GHz
/bin/uname -X     = unknown

/bin/arch              = unknown
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /var/tmp/portage/sci-physics/espresso-3.3.1/temp/python2.7/bin
PATH: /usr/lib/portage/python2.7/ebuild-helpers/xattr
PATH: /usr/lib/portage/python2.7/ebuild-helpers
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /opt/bin
PATH: /usr/x86_64-pc-linux-gnu/gcc-bin/6.2.0
PATH: /opt/ekopath/bin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2671: checking build system type
configure:2685: result: x86_64-pc-linux-gnu
configure:2705: checking host system type
configure:2718: result: x86_64-pc-linux-gnu
configure:2738: checking target system type
configure:2751: result: x86_64-pc-linux-gnu
configure:2796: checking for a BSD-compatible install
configure:2864: result: /usr/lib/portage/python2.7/ebuild-helpers/xattr/install -c
configure:2875: checking whether build environment is sane
configure:2930: result: yes
configure:2968: WARNING: 'missing' script is too old or missing
configure:3081: checking for a thread-safe mkdir -p
configure:3120: result: /bin/mkdir -p
configure:3127: checking for gawk
configure:3143: found /usr/bin/gawk
configure:3154: result: gawk
configure:3165: checking whether make sets $(MAKE)
configure:3187: result: yes
configure:3216: checking whether make supports nested variables
configure:3233: result: yes
configure:3322: checking whether UID '250' is supported by ustar format
configure:3325: result: yes
configure:3332: checking whether GID '250' is supported by ustar format
configure:3335: result: yes
configure:3343: checking how to create a ustar tar archive
configure:3354: tar --version
tar (GNU tar) 1.29
Copyright (C) 2015 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.

Written by John Gilmore and Jay Fenlason.
configure:3357: $? = 0
configure:3397: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar
configure:3400: $? = 0
configure:3404: tar -xf - <conftest.tar
configure:3407: $? = 0
configure:3409: cat conftest.dir/file
GrepMe
configure:3412: $? = 0
configure:3425: result: gnutar
configure:3434: checking whether to enable maintainer-specific portions of Makefiles
configure:3443: result: no
configure:3469: checking whether make supports nested variables
configure:3486: result: yes
configure:3499: checking whether we are using development sources
configure:3514: result: no
configure:3557: checking for style of include used by make
configure:3585: result: GNU
configure:3611: checking whether to compile using MPI
configure:3618: result: no
configure:3839: checking for C++ compiler version
configure:3848: x86_64-pc-linux-gnu-g++ --version >&5
x86_64-pc-linux-gnu-g++ (Gentoo 6.2.0-r1 p1.1) 6.2.0
Copyright (C) 2016 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3859: $? = 0
configure:3848: x86_64-pc-linux-gnu-g++ -v >&5
Using built-in specs.
COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/6.2.0/x86_64-pc-linux-gnu-g++
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/6.2.0/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with: /var/tmp/portage/sys-devel/gcc-6.2.0-r1/work/gcc-6.2.0/configure --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/6.2.0 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/6.2.0 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/6.2.0/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/6.2.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6 --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/6.2.0/python --enable-languages=c,c++,fortran --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo 6.2.0-r1 p1.1' --disable-esp --enable-libstdcxx-time --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-multilib --with-multilib-list=m32,m64 --disable-altivec --disable-fixed-point --enable-targets=all --disable-libgcj --enable-libgomp --disable-libmudflap --disable-libssp --disable-libcilkrts --disable-libmpx --enable-vtable-verify --enable-libvtv --enable-lto --without-isl --enable-libsanitizer --disable-default-pie --disable-default-ssp
Thread model: posix
gcc version 6.2.0 (Gentoo 6.2.0-r1 p1.1) 
configure:3859: $? = 0
configure:3848: x86_64-pc-linux-gnu-g++ -V >&5
x86_64-pc-linux-gnu-g++: error: unrecognized command line option '-V'
x86_64-pc-linux-gnu-g++: fatal error: no input files
compilation terminated.
configure:3859: $? = 1
configure:3848: x86_64-pc-linux-gnu-g++ -qversion >&5
x86_64-pc-linux-gnu-g++: error: unrecognized command line option '-qversion'; did you mean '--version'?
x86_64-pc-linux-gnu-g++: fatal error: no input files
compilation terminated.
configure:3859: $? = 1
configure:3879: checking whether the C++ compiler works
configure:3901: x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:3905: $? = 0
configure:3953: result: yes
configure:3956: checking for C++ compiler default output file name
configure:3958: result: a.out
configure:3964: checking for suffix of executables
configure:3971: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:3975: $? = 0
configure:3997: result: 
configure:4019: checking whether we are cross compiling
configure:4027: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:4031: $? = 0
configure:4038: ./conftest
configure:4042: $? = 0
configure:4057: result: no
configure:4062: checking for suffix of object files
configure:4084: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:4088: $? = 0
configure:4109: result: o
configure:4113: checking whether we are using the GNU C++ compiler
configure:4132: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:4132: $? = 0
configure:4141: result: yes
configure:4157: checking dependency style of x86_64-pc-linux-gnu-g++
configure:4268: result: none
configure:4401: WARNING: No MPI c++ compiler found, will use fake implementation!
configure:4600: checking whether x86_64-pc-linux-gnu-g++ understands -c and -o together
configure:4624: x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe -c conftest.cpp -o conftest2.o >&5
configure:4628: $? = 0
configure:4635: x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe -c conftest.cpp -o conftest2.o >&5
configure:4639: $? = 0
configure:4647: result: yes
configure:4713: checking how to print strings
configure:4740: result: printf
configure:4769: checking for x86_64-pc-linux-gnu-gcc
configure:4785: found /usr/bin/x86_64-pc-linux-gnu-gcc
configure:4796: result: x86_64-pc-linux-gnu-gcc
configure:5065: checking for C compiler version
configure:5074: x86_64-pc-linux-gnu-gcc --version >&5
x86_64-pc-linux-gnu-gcc (Gentoo 6.2.0-r1 p1.1) 6.2.0
Copyright (C) 2016 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:5085: $? = 0
configure:5074: x86_64-pc-linux-gnu-gcc -v >&5
Using built-in specs.
COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/6.2.0/x86_64-pc-linux-gnu-gcc
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/6.2.0/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with: /var/tmp/portage/sys-devel/gcc-6.2.0-r1/work/gcc-6.2.0/configure --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/6.2.0 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/6.2.0 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/6.2.0/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/6.2.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6 --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/6.2.0/python --enable-languages=c,c++,fortran --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo 6.2.0-r1 p1.1' --disable-esp --enable-libstdcxx-time --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-multilib --with-multilib-list=m32,m64 --disable-altivec --disable-fixed-point --enable-targets=all --disable-libgcj --enable-libgomp --disable-libmudflap --disable-libssp --disable-libcilkrts --disable-libmpx --enable-vtable-verify --enable-libvtv --enable-lto --without-isl --enable-libsanitizer --disable-default-pie --disable-default-ssp
Thread model: posix
gcc version 6.2.0 (Gentoo 6.2.0-r1 p1.1) 
configure:5085: $? = 0
configure:5074: x86_64-pc-linux-gnu-gcc -V >&5
x86_64-pc-linux-gnu-gcc: error: unrecognized command line option '-V'
x86_64-pc-linux-gnu-gcc: fatal error: no input files
compilation terminated.
configure:5085: $? = 1
configure:5074: x86_64-pc-linux-gnu-gcc -qversion >&5
x86_64-pc-linux-gnu-gcc: error: unrecognized command line option '-qversion'; did you mean '--version'?
x86_64-pc-linux-gnu-gcc: fatal error: no input files
compilation terminated.
configure:5085: $? = 1
configure:5089: checking whether we are using the GNU C compiler
configure:5108: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:5108: $? = 0
configure:5117: result: yes
configure:5126: checking whether x86_64-pc-linux-gnu-gcc accepts -g
configure:5146: x86_64-pc-linux-gnu-gcc -c -g  conftest.c >&5
configure:5146: $? = 0
configure:5187: result: yes
configure:5204: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89
configure:5267: x86_64-pc-linux-gnu-gcc  -c -march=native -O2 -pipe  conftest.c >&5
configure:5267: $? = 0
configure:5280: result: none needed
configure:5302: checking dependency style of x86_64-pc-linux-gnu-gcc
configure:5413: result: none
configure:5428: checking for a sed that does not truncate output
configure:5492: result: /bin/sed
configure:5510: checking for grep that handles long lines and -e
configure:5568: result: /bin/grep
configure:5573: checking for egrep
configure:5635: result: /bin/grep -E
configure:5640: checking for fgrep
configure:5702: result: /bin/grep -F
configure:5737: checking for ld used by x86_64-pc-linux-gnu-gcc
configure:5804: result: /usr/x86_64-pc-linux-gnu/bin/ld
configure:5811: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld
configure:5826: result: yes
configure:5838: checking for BSD- or MS-compatible name lister (nm)
configure:5887: result: /usr/bin/nm -B
configure:6017: checking the name lister (/usr/bin/nm -B) interface
configure:6024: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:6027: /usr/bin/nm -B "conftest.o"
configure:6030: output
0000000000000000 B some_variable
configure:6037: result: BSD nm
configure:6040: checking whether ln -s works
configure:6044: result: yes
configure:6052: checking the maximum length of command line arguments
configure:6182: result: 1572864
configure:6199: checking whether the shell understands some XSI constructs
configure:6209: result: yes
configure:6213: checking whether the shell understands "+="
configure:6219: result: yes
configure:6254: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format
configure:6294: result: func_convert_file_noop
configure:6301: checking how to convert x86_64-pc-linux-gnu file names to toolchain format
configure:6321: result: func_convert_file_noop
configure:6328: checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files
configure:6335: result: -r
configure:6369: checking for x86_64-pc-linux-gnu-objdump
configure:6385: found /usr/bin/x86_64-pc-linux-gnu-objdump
configure:6396: result: x86_64-pc-linux-gnu-objdump
configure:6468: checking how to recognize dependent libraries
configure:6670: result: pass_all
configure:6715: checking for x86_64-pc-linux-gnu-dlltool
configure:6745: result: no
configure:6755: checking for dlltool
configure:6785: result: no
configure:6815: checking how to associate runtime and link libraries
configure:6842: result: printf %s\n
configure:6858: checking for x86_64-pc-linux-gnu-ar
configure:6874: found /usr/bin/x86_64-pc-linux-gnu-ar
configure:6885: result: x86_64-pc-linux-gnu-ar
configure:6966: checking for archiver @FILE support
configure:6983: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:6983: $? = 0
configure:6986: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5
configure:6989: $? = 0
configure:6994: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5
x86_64-pc-linux-gnu-ar: conftest.o: No such file or directory
configure:6997: $? = 1
configure:7009: result: @
configure:7027: checking for x86_64-pc-linux-gnu-strip
configure:7043: found /usr/bin/x86_64-pc-linux-gnu-strip
configure:7054: result: x86_64-pc-linux-gnu-strip
configure:7126: checking for x86_64-pc-linux-gnu-ranlib
configure:7142: found /usr/bin/x86_64-pc-linux-gnu-ranlib
configure:7153: result: x86_64-pc-linux-gnu-ranlib
configure:7295: checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object
configure:7415: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:7418: $? = 0
configure:7422: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:7425: $? = 0
configure:7491: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp conftstm.o >&5
configure:7494: $? = 0
configure:7532: result: ok
configure:7569: checking for sysroot
configure:7599: result: no
configure:7677: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:7680: $? = 0
configure:7816: checking for x86_64-pc-linux-gnu-mt
configure:7846: result: no
configure:7856: checking for mt
configure:7886: result: no
configure:7906: checking if : is a manifest tool
configure:7912: : '-?'
configure:7920: result: no
configure:8562: checking how to run the C preprocessor
configure:8593: x86_64-pc-linux-gnu-gcc -E  conftest.c
configure:8593: $? = 0
configure:8607: x86_64-pc-linux-gnu-gcc -E  conftest.c
conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory
 #include <ac_nonexistent.h>
                            ^
compilation terminated.
configure:8607: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "3.3.1"
| #define PACKAGE_STRING "ESPResSo 3.3.1"
| #define PACKAGE_BUGREPORT "[e-mail]"
| #define PACKAGE_URL ""
| #define PACKAGE "espresso"
| #define VERSION "3.3.1"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:8632: result: x86_64-pc-linux-gnu-gcc -E
configure:8652: x86_64-pc-linux-gnu-gcc -E  conftest.c
configure:8652: $? = 0
configure:8666: x86_64-pc-linux-gnu-gcc -E  conftest.c
conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory
 #include <ac_nonexistent.h>
                            ^
compilation terminated.
configure:8666: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "3.3.1"
| #define PACKAGE_STRING "ESPResSo 3.3.1"
| #define PACKAGE_BUGREPORT "[e-mail]"
| #define PACKAGE_URL ""
| #define PACKAGE "espresso"
| #define VERSION "3.3.1"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:8695: checking for ANSI C header files
configure:8715: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8715: $? = 0
configure:8788: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.c  >&5
configure:8788: $? = 0
configure:8788: ./conftest
configure:8788: $? = 0
configure:8799: result: yes
configure:8812: checking for sys/types.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for sys/stat.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for stdlib.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for string.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for memory.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for strings.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for inttypes.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for stdint.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8812: checking for unistd.h
configure:8812: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8812: $? = 0
configure:8812: result: yes
configure:8826: checking for dlfcn.h
configure:8826: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:8826: $? = 0
configure:8826: result: yes
configure:9041: checking for objdir
configure:9056: result: .libs
configure:9327: checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions
configure:9345: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C
configure:9349: $? = 0
configure:9362: result: no
configure:9689: checking for x86_64-pc-linux-gnu-gcc option to produce PIC
configure:9696: result: -fPIC -DPIC
configure:9704: checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works
configure:9722: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  -fPIC -DPIC -DPIC conftest.c >&5
configure:9726: $? = 0
configure:9739: result: yes
configure:9768: checking if x86_64-pc-linux-gnu-gcc static flag -static works
configure:9796: result: yes
configure:9811: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o
configure:9832: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  -o out/conftest2.o conftest.c >&5
configure:9836: $? = 0
configure:9858: result: yes
configure:9866: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o
configure:9913: result: yes
configure:9946: checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries
configure:11099: result: yes
configure:11136: checking whether -lc should be explicitly linked in
configure:11144: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe  conftest.c >&5
configure:11147: $? = 0
configure:11162: x86_64-pc-linux-gnu-gcc -shared  -fPIC -DPIC conftest.o  -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep  -lc  \>/dev/null 2\>\&1
configure:11165: $? = 0
configure:11179: result: no
configure:11339: checking dynamic linker characteristics
configure:11850: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed -Wl,-rpath -Wl,/foo conftest.c  >&5
configure:11850: $? = 0
configure:12072: result: GNU/Linux ld.so
configure:12179: checking how to hardcode library paths into programs
configure:12204: result: immediate
configure:12744: checking whether stripping libraries is possible
configure:12749: result: yes
configure:12784: checking if libtool supports shared libraries
configure:12786: result: yes
configure:12789: checking whether to build shared libraries
configure:12810: result: yes
configure:12813: checking whether to build static libraries
configure:12817: result: no
configure:12840: checking how to run the C++ preprocessor
configure:12867: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:12867: $? = 0
configure:12881: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
conftest.cpp:23:28: fatal error: ac_nonexistent.h: No such file or directory
 #include <ac_nonexistent.h>
                            ^
compilation terminated.
configure:12881: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "3.3.1"
| #define PACKAGE_STRING "ESPResSo 3.3.1"
| #define PACKAGE_BUGREPORT "[e-mail]"
| #define PACKAGE_URL ""
| #define PACKAGE "espresso"
| #define VERSION "3.3.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:12906: result: x86_64-pc-linux-gnu-g++ -E
configure:12926: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:12926: $? = 0
configure:12940: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
conftest.cpp:23:28: fatal error: ac_nonexistent.h: No such file or directory
 #include <ac_nonexistent.h>
                            ^
compilation terminated.
configure:12940: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "3.3.1"
| #define PACKAGE_STRING "ESPResSo 3.3.1"
| #define PACKAGE_BUGREPORT "[e-mail]"
| #define PACKAGE_URL ""
| #define PACKAGE "espresso"
| #define VERSION "3.3.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:13109: checking for ld used by x86_64-pc-linux-gnu-g++
configure:13176: result: /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
configure:13183: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld
configure:13198: result: yes
configure:13253: checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries
configure:14258: result: yes
configure:14294: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:14297: $? = 0
configure:14817: checking for x86_64-pc-linux-gnu-g++ option to produce PIC
configure:14824: result: -fPIC -DPIC
configure:14832: checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works
configure:14850: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  -fPIC -DPIC -DPIC conftest.cpp >&5
configure:14854: $? = 0
configure:14867: result: yes
configure:14890: checking if x86_64-pc-linux-gnu-g++ static flag -static works
configure:14918: result: yes
configure:14930: checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o
configure:14951: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  -o out/conftest2.o conftest.cpp >&5
configure:14955: $? = 0
configure:14977: result: yes
configure:14982: checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o
configure:15029: result: yes
configure:15059: checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries
configure:15095: result: yes
configure:15236: checking dynamic linker characteristics
configure:15903: result: GNU/Linux ld.so
configure:15956: checking how to hardcode library paths into programs
configure:15981: result: immediate
configure:16046: checking for gawk
configure:16073: result: gawk
configure:16084: checking for egrep
configure:16146: result: /bin/grep -E
configure:16152: checking whether ln -s works
configure:16156: result: yes
configure:16165: checking for doxygen
configure:16196: result: no
configure:16214: checking for dot
configure:16245: result: no
configure:16281: checking for pdflatex
configure:16299: found /usr/bin/pdflatex
configure:16312: result: /usr/bin/pdflatex
configure:16322: checking for makeindex
configure:16340: found /usr/bin/makeindex
configure:16353: result: /usr/bin/makeindex
configure:16363: checking for bibtex
configure:16381: found /usr/bin/bibtex
configure:16394: result: /usr/bin/bibtex
configure:16423: checking for ANSI C header files
configure:16527: result: yes
configure:16540: checking arpa/inet.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking arpa/inet.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for arpa/inet.h
configure:16540: result: yes
configure:16540: checking fcntl.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking fcntl.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for fcntl.h
configure:16540: result: yes
configure:16540: checking float.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking float.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for float.h
configure:16540: result: yes
configure:16540: checking for inttypes.h
configure:16540: result: yes
configure:16540: checking limits.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking limits.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for limits.h
configure:16540: result: yes
configure:16540: checking netdb.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking netdb.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for netdb.h
configure:16540: result: yes
configure:16540: checking netinet/in.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking netinet/in.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for netinet/in.h
configure:16540: result: yes
configure:16540: checking stddef.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking stddef.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for stddef.h
configure:16540: result: yes
configure:16540: checking for stdlib.h
configure:16540: result: yes
configure:16540: checking for string.h
configure:16540: result: yes
configure:16540: checking for strings.h
configure:16540: result: yes
configure:16540: checking sys/file.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking sys/file.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for sys/file.h
configure:16540: result: yes
configure:16540: checking sys/socket.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking sys/socket.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for sys/socket.h
configure:16540: result: yes
configure:16540: checking sys/time.h usability
configure:16540: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking sys/time.h presence
configure:16540: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16540: $? = 0
configure:16540: result: yes
configure:16540: checking for sys/time.h
configure:16540: result: yes
configure:16540: checking for unistd.h
configure:16540: result: yes
configure:16561: checking for stdlib.h
configure:16561: result: yes
configure:16571: checking for GNU libc compatible malloc
configure:16595: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16595: $? = 0
configure:16595: ./conftest
configure:16595: $? = 0
configure:16605: result: yes
configure:16626: checking for working memcmp
configure:16669: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16669: $? = 0
configure:16669: ./conftest
configure:16669: $? = 0
configure:16679: result: yes
configure:16690: checking for stdlib.h
configure:16690: result: yes
configure:16700: checking for GNU libc compatible realloc
configure:16724: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16724: $? = 0
configure:16724: ./conftest
configure:16724: $? = 0
configure:16734: result: yes
configure:16758: checking sys/select.h usability
configure:16758: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16758: $? = 0
configure:16758: result: yes
configure:16758: checking sys/select.h presence
configure:16758: x86_64-pc-linux-gnu-g++ -E  conftest.cpp
configure:16758: $? = 0
configure:16758: result: yes
configure:16758: checking for sys/select.h
configure:16758: result: yes
configure:16758: checking for sys/socket.h
configure:16758: result: yes
configure:16768: checking types of arguments for select
configure:16796: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16796: $? = 0
configure:16807: result: int,fd_set *,struct timeval *
configure:16830: checking for size_t
configure:16830: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:16830: $? = 0
configure:16830: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
conftest.cpp: In function 'int main()':
conftest.cpp:84:20: error: expected primary-expression before ')' token
 if (sizeof ((size_t)))
                    ^
configure:16830: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "3.3.1"
| #define PACKAGE_STRING "ESPResSo 3.3.1"
| #define PACKAGE_BUGREPORT "[e-mail]"
| #define PACKAGE_URL ""
| #define PACKAGE "espresso"
| #define VERSION "3.3.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define STDC_HEADERS 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_FLOAT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_MALLOC 1
| #define HAVE_STDLIB_H 1
| #define HAVE_REALLOC 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define SELECT_TYPE_ARG1 int
| #define SELECT_TYPE_ARG234 (fd_set *)
| #define SELECT_TYPE_ARG5 (struct timeval *)
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:16830: result: yes
configure:16841: checking for working strtod
configure:16882: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
conftest.cpp: In function 'int main()':
conftest.cpp:90:20: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
     char *string = " +69";
                    ^~~~~~
conftest.cpp:101:20: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
     char *string = "NaN";
                    ^~~~~
configure:16882: $? = 0
configure:16882: ./conftest
configure:16882: $? = 0
configure:16892: result: yes
configure:16957: checking for atexit
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for floor
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for getcwd
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for gethostbyname
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for memset
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for pow
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for rint
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for select
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for socket
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16957: checking for sqrt
configure:16957: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp  >&5
configure:16957: $? = 0
configure:16957: result: yes
configure:16980: checking whether to use FFTW
configure:16990: result: yes
configure:16997: checking for libfftw3
configure:17021: x86_64-pc-linux-gnu-g++ -o conftest -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed conftest.cpp -lfftw3  -lm >&5
configure:17021: $? = 0
configure:17057: result: yes
configure:17073: checking for fftw3.h
configure:17083: x86_64-pc-linux-gnu-g++ -c -march=native -O2 -pipe  conftest.cpp >&5
configure:17083: $? = 0
configure:17105: result: yes
configure:17151: checking whether to use CUDA
configure:17161: result: no
configure:17182: checking for nvcc
configure:17214: result: no
configure:19219: checking whether /usr/bin/python2.7 version is >= 2.5
configure:19230: /usr/bin/python2.7 -c import sys # split strings by '.' and convert to numeric. Append some zeros # because we need at least 4 digits for the hex conversion. # map returns an iterator in Python 3.0 and a list in 2.x minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] minverhex = 0 # xrange is not present in Python 3.0 and range returns an iterator for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[i] sys.exit(sys.hexversion < minverhex)
configure:19233: $? = 0
configure:19235: result: yes
configure:19328: checking for /usr/bin/python2.7 version
configure:19335: result: 2.7
configure:19347: checking for /usr/bin/python2.7 platform
configure:19354: result: linux2
configure:19380: checking for /usr/bin/python2.7 script directory
configure:19415: result: ${prefix}/lib64/python2.7/site-packages
configure:19424: checking for /usr/bin/python2.7 extension module directory
configure:19459: result: ${exec_prefix}/lib64/python2.7/site-packages
configure:19482: checking whether python -B works
configure:19486: result: yes
configure:19494: checking whether the python interface is wanted
configure:19504: result: yes
configure:19517: checking for python2.7
configure:19547: result: /usr/bin/python2.7 -B
configure:19569: checking for a version of Python >= '2.5'
configure:19575: result: yes
configure:19596: checking for python2.7-config
configure:19614: found /usr/bin/python2.7-config
configure:19627: result: /usr/bin/python2.7-config
configure:19649: checking consistency of all components of python development environment
configure:19675: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe  -I/usr/include/python2.7 -I/usr/include/python2.7 -fno-strict-aliasing -march=native -O2 -pipe -fwrapv -DNDEBUG -Wl,-O1 -Wl,--as-needed conftest.c -lfftw3  -lm -lpython2.7 -lpthread -ldl -lutil -lm -Xlinker -export-dynamic  -lpython2.7 -lpthread -ldl -lutil -lm >&5
configure:19675: $? = 0
configure:19691: result: yes
configure:19944: checking for cython
configure:19962: found /usr/bin/cython
configure:19975: result: /usr/bin/cython
configure:19995: checking python2.7 module: numpy
configure:20004: result: no
configure:20010: error: failed to find required module numpy

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-pc-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-march=native -O2 -pipe'
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CPU_COUNT_set=
ac_cv_env_CPU_COUNT_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-march=native -O2 -pipe'
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=x86_64-pc-linux-gnu-g++
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-Wl,-O1 -Wl,--as-needed'
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_MPICXX_set=
ac_cv_env_MPICXX_value=
ac_cv_env_MPIEXEC_set=
ac_cv_env_MPIEXEC_value=
ac_cv_env_MYCONFIG_set=
ac_cv_env_MYCONFIG_value=
ac_cv_env_NVCCFLAGS_set=
ac_cv_env_NVCCFLAGS_value=
ac_cv_env_NVCC_set=
ac_cv_env_NVCC_value=
ac_cv_env_PYTHON_VERSION_set=
ac_cv_env_PYTHON_VERSION_value=
ac_cv_env_PYTHON_set=set
ac_cv_env_PYTHON_value=/usr/bin/python2.7
ac_cv_env_XMKMF_set=
ac_cv_env_XMKMF_value=
ac_cv_env_build_alias_set=set
ac_cv_env_build_alias_value=x86_64-pc-linux-gnu
ac_cv_env_host_alias_set=set
ac_cv_env_host_alias_value=x86_64-pc-linux-gnu
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_func_atexit=yes
ac_cv_func_floor=yes
ac_cv_func_getcwd=yes
ac_cv_func_gethostbyname=yes
ac_cv_func_malloc_0_nonnull=yes
ac_cv_func_memcmp_working=yes
ac_cv_func_memset=yes
ac_cv_func_pow=yes
ac_cv_func_realloc_0_nonnull=yes
ac_cv_func_rint=yes
ac_cv_func_select=yes
ac_cv_func_select_args='int,fd_set *,struct timeval *'
ac_cv_func_socket=yes
ac_cv_func_sqrt=yes
ac_cv_func_strtod=yes
ac_cv_header_arpa_inet_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_float_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_limits_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_netdb_h=yes
ac_cv_header_netinet_in_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stddef_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_file_h=yes
ac_cv_header_sys_select_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_host=x86_64-pc-linux-gnu
ac_cv_objext=o
ac_cv_path_BIBTEX=/usr/bin/bibtex
ac_cv_path_CYTHON=/usr/bin/cython
ac_cv_path_DOT=no
ac_cv_path_DOXYGEN=no
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_FGREP='/bin/grep -F'
ac_cv_path_GREP=/bin/grep
ac_cv_path_MAKEINDEX=/usr/bin/makeindex
ac_cv_path_NVCC=no
ac_cv_path_PDFLATEX=/usr/bin/pdflatex
ac_cv_path_PYTHON='/usr/bin/python2.7 -B'
ac_cv_path_PYTHONCONFIG=/usr/bin/python2.7-config
ac_cv_path_SED=/bin/sed
ac_cv_path_install='/usr/lib/portage/python2.7/ebuild-helpers/xattr/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AR=x86_64-pc-linux-gnu-ar
ac_cv_prog_AWK=gawk
ac_cv_prog_CC=x86_64-pc-linux-gnu-gcc
ac_cv_prog_CPP='x86_64-pc-linux-gnu-gcc -E'
ac_cv_prog_CXXCPP='x86_64-pc-linux-gnu-g++ -E'
ac_cv_prog_OBJDUMP=x86_64-pc-linux-gnu-objdump
ac_cv_prog_RANLIB=x86_64-pc-linux-gnu-ranlib
ac_cv_prog_STRIP=x86_64-pc-linux-gnu-strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_c_o=yes
ac_cv_prog_make_make_set=yes
ac_cv_target=x86_64-pc-linux-gnu
ac_cv_type_size_t=yes
am_cv_CC_dependencies_compiler_type=none
am_cv_CXX_dependencies_compiler_type=none
am_cv_make_support_nested_variables=yes
am_cv_prog_tar_ustar=gnutar
am_cv_python_platform=linux2
am_cv_python_pyexecdir='${exec_prefix}/lib64/python2.7/site-packages'
am_cv_python_pythondir='${prefix}/lib64/python2.7/site-packages'
am_cv_python_version=2.7
lt_cv_ar_at_file=@
lt_cv_archive_cmds_need_lc=no
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/x86_64-pc-linux-gnu/bin/ld
lt_cv_path_LDCXX='/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64'
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_mainfest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_pic='-fPIC -DPIC'
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_CXX=yes
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_shlibpath_overrides_runpath=yes
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[	 ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[	 ][	 ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/  {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/  {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/  {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/  {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/  {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=1572864
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='aclocal-1.13'
AMDEPBACKSLASH=''
AMDEP_FALSE=''
AMDEP_TRUE='#'
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR='x86_64-pc-linux-gnu-ar'
AUTOCONF='autoconf'
AUTOHEADER='autoheader'
AUTOMAKE='automake-1.13'
AWK='gawk'
BIBTEX='/usr/bin/bibtex'
CC='x86_64-pc-linux-gnu-gcc'
CCDEPMODE='depmode=none'
CFLAGS='-march=native -O2 -pipe'
CONFIG_STATUS_DEPENDENCIES=''
CPP='x86_64-pc-linux-gnu-gcc -E'
CPPFLAGS=''
CPU_COUNT=''
CUDA_FALSE=''
CUDA_TRUE='#'
CXX='x86_64-pc-linux-gnu-g++'
CXXCPP='x86_64-pc-linux-gnu-g++ -E'
CXXDEPMODE='depmode=none'
CXXFLAGS='-march=native -O2 -pipe'
CYGPATH_W='echo'
CYTHON='/usr/bin/cython'
DEFS=''
DEPDIR='.deps'
DEVEL_SRC_FALSE=''
DEVEL_SRC_TRUE='#'
DLLTOOL='false'
DOT='no'
DOT_PATH='.'
DOXYGEN='no'
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
ESPRESSO_MPIEXEC=''
EXEEXT=''
FGREP='/bin/grep -F'
GREP='/bin/grep'
HAVE_DOT='NO'
HAVE_DOXYGEN_FALSE=''
HAVE_DOXYGEN_TRUE='#'
HAVE_LATEX_FALSE='#'
HAVE_LATEX_TRUE=''
HAVE_PYTHON_FALSE='#'
HAVE_PYTHON_TRUE=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD='/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64'
LDFLAGS='-Wl,-O1 -Wl,--as-needed'
LIBOBJS=''
LIBS='-lfftw3  -lm'
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LN_S='ln -s'
LTLIBOBJS=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINDEX='/usr/bin/makeindex'
MAKEINFO='makeinfo'
MANIFEST_TOOL=':'
MKDIR_P='/bin/mkdir -p'
MPICXX=''
MPIEXEC=''
MPI_FAKE='yes'
MPI_FAKE_FALSE='#'
MPI_FAKE_TRUE=''
MYCONFIG=''
MYCONFIG_FALSE=''
MYCONFIG_TRUE=''
MYMPIEXEC=''
NM='/usr/bin/nm -B'
NMEDIT=''
NVCC='no'
NVCCFLAGS=''
OBJDUMP='x86_64-pc-linux-gnu-objdump'
OBJEXT='o'
OTOOL64=''
OTOOL=''
PACKAGE='espresso'
PACKAGE_BUGREPORT='[e-mail]'
PACKAGE_NAME='ESPResSo'
PACKAGE_STRING='ESPResSo 3.3.1'
PACKAGE_TARNAME='espresso'
PACKAGE_URL=''
PACKAGE_VERSION='3.3.1'
PATH_SEPARATOR=':'
PDFLATEX='/usr/bin/pdflatex'
POW_LIB=''
PYTHON='/usr/bin/python2.7 -B'
PYTHONCONFIG='/usr/bin/python2.7-config'
PYTHON_CPPFLAGS='-I/usr/include/python2.7 -I/usr/include/python2.7 -fno-strict-aliasing -march=native -O2 -pipe -fwrapv -DNDEBUG'
PYTHON_EXEC_PREFIX='${exec_prefix}'
PYTHON_EXTRA_LDFLAGS=''
PYTHON_EXTRA_LIBS='-lpython2.7 -lpthread -ldl -lutil -lm'
PYTHON_INTERFACE_FALSE=''
PYTHON_INTERFACE_TRUE=''
PYTHON_LDFLAGS='-lpython2.7 -lpthread -ldl -lutil -lm -Xlinker -export-dynamic'
PYTHON_PLATFORM='linux2'
PYTHON_PREFIX='${prefix}'
PYTHON_SITE_PKG=''
PYTHON_VERSION='2.7'
RANLIB='x86_64-pc-linux-gnu-ranlib'
SED='/bin/sed'
SET_MAKE=''
SHELL='/bin/sh'
STRIP='x86_64-pc-linux-gnu-strip'
TCL_FALSE=''
TCL_TRUE=''
VERSION='3.3.1'
XMKMF=''
X_CFLAGS=''
X_EXTRA_LIBS=''
X_LIBS=''
X_PRE_LIBS=''
ac_ct_AR=''
ac_ct_CC=''
ac_ct_CXX=''
ac_ct_DUMPBIN=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE=''
am__fastdepCC_TRUE='#'
am__fastdepCXX_FALSE=''
am__fastdepCXX_TRUE='#'
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep=''
am__quote=''
am__tar='tar --format=ustar -chf - "$$tardir"'
am__untar='tar -xf -'
bindir='${exec_prefix}/bin'
build='x86_64-pc-linux-gnu'
build_alias='x86_64-pc-linux-gnu'
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='pc'
buildscriptsdir=''
datadir='/usr/share'
datarootdir='${prefix}/share'
docdir='/usr/share/doc/espresso-3.3.1'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-pc-linux-gnu'
host_alias='x86_64-pc-linux-gnu'
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='pc'
htmldir='/usr/share/doc/espresso-3.3.1/html'
includedir='${prefix}/include'
infodir='/usr/share/info'
install_sh='${SHELL} /var/tmp/portage/sci-physics/espresso-3.3.1/work/espresso-3.3.1/config/install-sh'
libdir='/usr/lib64'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='/var/lib'
mandir='/usr/share/man'
mkdir_p='$(MKDIR_P)'
objdir='.libs'
oldincludedir='/usr/include'
pdfdir='${docdir}'
pkgpyexecdir='${pyexecdir}/espresso'
pkgpythondir='${pythondir}/espresso'
prefix='/usr'
program_transform_name='s,x,x,'
psdir='${docdir}'
pyexecdir='${exec_prefix}/lib64/python2.7/site-packages'
pythondir='${prefix}/lib64/python2.7/site-packages'
sbindir='${exec_prefix}/sbin'
scriptsdir=''
sharedstatedir='${prefix}/com'
sysconfdir='/etc'
target='x86_64-pc-linux-gnu'
target_alias=''
target_cpu='x86_64'
target_os='linux-gnu'
target_vendor='pc'
toolsdir=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "ESPResSo"
#define PACKAGE_TARNAME "espresso"
#define PACKAGE_VERSION "3.3.1"
#define PACKAGE_STRING "ESPResSo 3.3.1"
#define PACKAGE_BUGREPORT "[e-mail]"
#define PACKAGE_URL ""
#define PACKAGE "espresso"
#define VERSION "3.3.1"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define STDC_HEADERS 1
#define HAVE_ARPA_INET_H 1
#define HAVE_FCNTL_H 1
#define HAVE_FLOAT_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_LIMITS_H 1
#define HAVE_NETDB_H 1
#define HAVE_NETINET_IN_H 1
#define HAVE_STDDEF_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_FILE_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_UNISTD_H 1
#define HAVE_STDLIB_H 1
#define HAVE_MALLOC 1
#define HAVE_STDLIB_H 1
#define HAVE_REALLOC 1
#define HAVE_SYS_SELECT_H 1
#define HAVE_SYS_SOCKET_H 1
#define SELECT_TYPE_ARG1 int
#define SELECT_TYPE_ARG234 (fd_set *)
#define SELECT_TYPE_ARG5 (struct timeval *)
#define HAVE_ATEXIT 1
#define HAVE_FLOOR 1
#define HAVE_GETCWD 1
#define HAVE_GETHOSTBYNAME 1
#define HAVE_MEMSET 1
#define HAVE_POW 1
#define HAVE_RINT 1
#define HAVE_SELECT 1
#define HAVE_SOCKET 1
#define HAVE_SQRT 1
#define FFTW /**/

configure: exit 1