* Package: sci-biology/iqpnni-3.3.2 * Repository: gentoo * Maintainer: sci-biology@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU * FEATURES: preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking iqpnni-3.3.2.tar.gz to /var/tmp/portage/sci-biology/iqpnni-3.3.2/work >>> Source unpacked in /var/tmp/portage/sci-biology/iqpnni-3.3.2/work >>> Preparing source in /var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2 ... * econf: updating iqpnni-3.3.2/config.sub with /usr/share/gnuconfig/config.sub * econf: updating iqpnni-3.3.2/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --libdir=/usr/lib64 checking for a BSD-compatible install... /usr/lib/portage/python3.4/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ checking for C++ compiler default output file name... a.out checking whether the C++ compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of x86_64-pc-linux-gnu-g++... none checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking dependency style of x86_64-pc-linux-gnu-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking whether we are using the GNU C++ compiler... (cached) yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes checking dependency style of x86_64-pc-linux-gnu-g++... (cached) none checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for objdir... .libs checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2 ... make -j1 make all-recursive make[1]: Entering directory '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2' Making all in src make[2]: Entering directory '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2/src' make[3]: Entering directory '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2/src' x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -march=native -O2 -pipe -c -o wag.o wag.cpp x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -march=native -O2 -pipe -c -o vt.o vt.cpp x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -march=native -O2 -pipe -c -o vec.o vec.cpp x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -march=native -O2 -pipe -c -o utl.o utl.cpp x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -march=native -O2 -pipe -c -o usertree.o usertree.cpp usertree.cpp: In member function ‘void UserTree::readFile(const char*)’: usertree.cpp:97:9: error: no match for ‘operator==’ (operand types are ‘std::ifstream {aka std::basic_ifstream}’ and ‘int’) if (in == 0) ~~~^~~~ usertree.cpp:97:9: note: candidate: operator==(int, int) usertree.cpp:97:9: note: no known conversion for argument 1 from ‘std::ifstream {aka std::basic_ifstream}’ to ‘int’ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iosfwd:40:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/postypes.h:216:5: note: candidate: template bool std::operator==(const std::fpos<_StateT>&, const std::fpos<_StateT>&) operator==(const fpos<_StateT>& __lhs, const fpos<_StateT>& __rhs) ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/postypes.h:216:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::fpos<_StateT>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_algobase.h:64:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/char_traits.h:39, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_pair.h:363:5: note: candidate: template constexpr bool std::operator==(const std::pair<_T1, _T2>&, const std::pair<_T1, _T2>&) operator==(const pair<_T1, _T2>& __x, const pair<_T1, _T2>& __y) ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_pair.h:363:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::pair<_T1, _T2>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_algobase.h:67:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/char_traits.h:39, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:292:5: note: candidate: template bool std::operator==(const std::reverse_iterator<_Iterator>&, const std::reverse_iterator<_Iterator>&) operator==(const reverse_iterator<_Iterator>& __x, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:292:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::reverse_iterator<_Iterator>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_algobase.h:67:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/char_traits.h:39, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:342:5: note: candidate: template bool std::operator==(const std::reverse_iterator<_Iterator>&, const std::reverse_iterator<_IteratorR>&) operator==(const reverse_iterator<_IteratorL>& __x, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:342:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::reverse_iterator<_Iterator>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_algobase.h:67:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/char_traits.h:39, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:1106:5: note: candidate: template bool std::operator==(const std::move_iterator<_IteratorL>&, const std::move_iterator<_IteratorR>&) operator==(const move_iterator<_IteratorL>& __x, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:1106:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::move_iterator<_IteratorL>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_algobase.h:67:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/char_traits.h:39, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:1112:5: note: candidate: template bool std::operator==(const std::move_iterator<_IteratorL>&, const std::move_iterator<_IteratorL>&) operator==(const move_iterator<_Iterator>& __x, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/stl_iterator.h:1112:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::move_iterator<_IteratorL>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/string:41:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_classes.h:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:41, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/allocator.h:133:5: note: candidate: template bool std::operator==(const std::allocator<_CharT>&, const std::allocator<_T2>&) operator==(const allocator<_T1>&, const allocator<_T2>&) ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/allocator.h:133:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::allocator<_CharT>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/string:41:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_classes.h:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:41, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/allocator.h:139:5: note: candidate: template bool std::operator==(const std::allocator<_CharT>&, const std::allocator<_CharT>&) operator==(const allocator<_Tp>&, const allocator<_Tp>&) ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/allocator.h:139:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::allocator<_CharT>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/string:52:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_classes.h:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:41, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5050:5: note: candidate: template bool std::operator==(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) operator==(const basic_string<_CharT, _Traits, _Alloc>& __lhs, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5050:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/string:52:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_classes.h:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:41, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5058:5: note: candidate: template typename __gnu_cxx::__enable_if::__value, bool>::__type std::operator==(const std::__cxx11::basic_string<_CharT>&, const std::__cxx11::basic_string<_CharT>&) operator==(const basic_string<_CharT>& __lhs, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5058:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::__cxx11::basic_string<_CharT>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/string:52:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_classes.h:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:41, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5072:5: note: candidate: template bool std::operator==(const _CharT*, const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) operator==(const _CharT* __lhs, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5072:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: mismatched types ‘const _CharT*’ and ‘std::basic_ifstream’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/string:52:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_classes.h:40, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:41, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5084:5: note: candidate: template bool std::operator==(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) operator==(const basic_string<_CharT, _Traits, _Alloc>& __lhs, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_string.h:5084:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>’ if (in == 0) ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/ios_base.h:46:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:42, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:284:3: note: candidate: bool std::operator==(const std::error_code&, const std::error_code&) operator==(const error_code& __lhs, const error_code& __rhs) noexcept ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:284:3: note: no known conversion for argument 1 from ‘std::ifstream {aka std::basic_ifstream}’ to ‘const std::error_code&’ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:289:3: note: candidate: bool std::operator==(const std::error_code&, const std::error_condition&) operator==(const error_code& __lhs, const error_condition& __rhs) noexcept ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:289:3: note: no known conversion for argument 1 from ‘std::ifstream {aka std::basic_ifstream}’ to ‘const std::error_code&’ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:296:3: note: candidate: bool std::operator==(const std::error_condition&, const std::error_code&) operator==(const error_condition& __lhs, const error_code& __rhs) noexcept ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:296:3: note: no known conversion for argument 1 from ‘std::ifstream {aka std::basic_ifstream}’ to ‘const std::error_condition&’ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:303:3: note: candidate: bool std::operator==(const std::error_condition&, const std::error_condition&) operator==(const error_condition& __lhs, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/system_error:303:3: note: no known conversion for argument 1 from ‘std::ifstream {aka std::basic_ifstream}’ to ‘const std::error_condition&’ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/locale_facets.h:48:0, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/basic_ios.h:37, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ios:44, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/ostream:38, from /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/iostream:39, from outstream.h:29, from usertree.cpp:29: /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/streambuf_iterator.h:204:5: note: candidate: template bool std::operator==(const std::istreambuf_iterator<_CharT, _Traits>&, const std::istreambuf_iterator<_CharT, _Traits>&) operator==(const istreambuf_iterator<_CharT, _Traits>& __a, ^~~~~~~~ /usr/lib/gcc/x86_64-pc-linux-gnu/6.2.0/include/g++-v6/bits/streambuf_iterator.h:204:5: note: template argument deduction/substitution failed: usertree.cpp:97:12: note: ‘std::ifstream {aka std::basic_ifstream}’ is not derived from ‘const std::istreambuf_iterator<_CharT, _Traits>’ if (in == 0) ^ make[3]: *** [Makefile:386: usertree.o] Error 1 make[3]: Leaving directory '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2/src' make[2]: *** [Makefile:415: all-recursive] Error 1 make[2]: Leaving directory '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2/src' make[1]: *** [Makefile:266: all-recursive] Error 1 make[1]: Leaving directory '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2' make: *** [Makefile:196: all] Error 2 * ERROR: sci-biology/iqpnni-3.3.2::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-biology/iqpnni-3.3.2::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-biology/iqpnni-3.3.2::gentoo'`. * The complete build log is located at '/var/log/portage/sci-biology:iqpnni-3.3.2:20160919-085232.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/iqpnni-3.3.2/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-biology/iqpnni-3.3.2/temp/environment'. * Working directory: '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2' * S: '/var/tmp/portage/sci-biology/iqpnni-3.3.2/work/iqpnni-3.3.2'