sci-biology:transfac-3.2:20160629-000532.log

sci-biology:transfac-3.2:20160629-000532.log (text/plain), 1.63 KB, created by Toralf Förster on 2016-06-29 07:03:38 UTC

 * Package:    sci-biology/transfac-3.2
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc emboss kernel_linux userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking transfac32.tar.Z to /var/tmp/portage/sci-biology/transfac-3.2/work
>>> Source unpacked in /var/tmp/portage/sci-biology/transfac-3.2/work
>>> Compiling source in /var/tmp/portage/sci-biology/transfac-3.2/work ...

 * Indexing TRANSFAC for usage with EMBOSS.
/var/tmp/portage/sci-biology/transfac-3.2/temp/environment: line 251: 30897 Bus error               EMBOSS_DATA=. tfextract -auto -infile class.dat
 * ERROR: sci-biology/transfac-3.2::gentoo failed (compile phase):
 *   Indexing TRANSFAC failed.
 * 
 * Call stack:
 *     ebuild.sh, line 115:  Called src_compile
 *   environment, line 255:  Called die
 * The specific snippet of code:
 *           EMBOSS_DATA=. tfextract -auto -infile class.dat || die "Indexing TRANSFAC failed.";
 * 
 * If you need support, post the output of `emerge --info '=sci-biology/transfac-3.2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-biology/transfac-3.2::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-biology:transfac-3.2:20160629-000532.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/transfac-3.2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/transfac-3.2/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-biology/transfac-3.2/work'
 * S: '/var/tmp/portage/sci-biology/transfac-3.2/work'