sci-mathematics:rstudio-0.98.490-r1:20160515-162440.log

sci-mathematics:rstudio-0.98.490-r1:20160515-162440.log (text/plain), 8.81 KB, created by Toralf Förster on 2016-05-15 16:31:06 UTC

 * Package:    sci-mathematics/rstudio-0.98.490-r1
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
 * Using: icedtea-bin-7
>>> Unpacking source...
>>> Unpacking rstudio-0.98.490.tar.gz to /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work
>>> Unpacking gwt-2.5.1.zip to /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work
>>> Source unpacked in /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work
>>> Preparing source in /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490 ...
 * Applying rstudio-0.98.490-prefs.patch ...
 [ ok ]
 * Applying rstudio-0.98.490-paths.patch ...
 [ ok ]
 * Applying rstudio-0.98.490-linker_flags.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build"
cmake --no-warn-unused-cli -C /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DDISTRO_SHARE=share/rstudio -DRSTUDIO_INSTALL_FREEDESKTOP=ON -DRSTUDIO_TARGET=Desktop -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490
Not searching for unused variables given on the command line.
loading initial cache file /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/gentoo_common_config.cmake
-- The C compiler identification is GNU 4.9.3
-- The CXX compiler identification is GNU 4.9.3
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Boost version: 1.56.0
-- Found the following Boost libraries:
--   date_time
--   filesystem
--   iostreams
--   program_options
--   regex
--   signals
--   system
--   thread
--   chrono
-- Performing Test HAVE_SCANDIR_POSIX
-- Performing Test HAVE_SCANDIR_POSIX - Success
-- Looking for SA_NOCLDWAIT
-- Looking for SA_NOCLDWAIT - found
-- Looking for SO_PEERCRED
-- Looking for SO_PEERCRED - found
-- Looking for inotify_init1
-- Looking for inotify_init1 - found
-- Looking for getpeereid
-- Looking for getpeereid - not found
-- Looking for setresuid
-- Looking for setresuid - found
-- Found LibR: /usr/lib64/R  
-- Found R: /usr/lib64/R
-- Performing Test LIBR_MINIMUM_VERSION
-- Performing Test LIBR_MINIMUM_VERSION - Success
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.8.6", minimum required is "4.8.0") 
-- <<< Gentoo configuration >>>
Build type      Gentoo
Install path    /usr
Compiler flags:
C               -march=native -O2 -pipe 
C++             -march=native -O2 -pipe 
Linker flags:
Executable       -Wl,-O1 -Wl,--as-needed
Module           -Wl,-O1 -Wl,--as-needed
Shared           -Wl,-O1 -Wl,--as-needed

-- Configuring done
-- Generating done
-- Build files have been written to: /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build"
make -j1 VERBOSE=1 
/usr/bin/cmake -H/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490 -B/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/CMakeFiles /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
make -f src/gwt/CMakeFiles/gwt_build.dir/build.make src/gwt/CMakeFiles/gwt_build.dir/depend
make[2]: Entering directory '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
cd /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490 /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490/src/gwt /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/src/gwt /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/src/gwt/CMakeFiles/gwt_build.dir/DependInfo.cmake
Dependee "/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/src/gwt/CMakeFiles/gwt_build.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/src/gwt/CMakeFiles/gwt_build.dir/depend.internal".
Dependee "/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/src/gwt/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build/src/gwt/CMakeFiles/gwt_build.dir/depend.internal".
Scanning dependencies of target gwt_build
make[2]: Leaving directory '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
make -f src/gwt/CMakeFiles/gwt_build.dir/build.make src/gwt/CMakeFiles/gwt_build.dir/build
make[2]: Entering directory '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
cd /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490/src/gwt && ant
Buildfile: /var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490/src/gwt/build.xml
java.lang.NoSuchMethodError: org.apache.tools.ant.Project.setCoreLoader(Ljava/lang/ClassLoader;)V
	at org.apache.tools.ant.Main.runBuild(Main.java:765)
	at org.apache.tools.ant.Main.startAnt(Main.java:235)
	at org.apache.tools.ant.launch.Launcher.run(Launcher.java:280)
	at org.apache.tools.ant.launch.Launcher.main(Launcher.java:109)
org.apache.tools.ant.Project.setCoreLoader(Ljava/lang/ClassLoader;)V
src/gwt/CMakeFiles/gwt_build.dir/build.make:57: recipe for target 'gwt_build' failed
make[2]: *** [gwt_build] Error 1
make[2]: Leaving directory '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
CMakeFiles/Makefile2:106: recipe for target 'src/gwt/CMakeFiles/gwt_build.dir/all' failed
make[1]: *** [src/gwt/CMakeFiles/gwt_build.dir/all] Error 2
make[1]: Leaving directory '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
Makefile:149: recipe for target 'all' failed
make: *** [all] Error 2
 * ERROR: sci-mathematics/rstudio-0.98.490-r1::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-mathematics/rstudio-0.98.490-r1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-mathematics/rstudio-0.98.490-r1::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-mathematics:rstudio-0.98.490-r1:20160515-162440.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490_build'
 * S: '/var/tmp/portage/sci-mathematics/rstudio-0.98.490-r1/work/rstudio-0.98.490'
!!! When you file a bug report, please include the following information:
GENTOO_VM=icedtea-bin-7  CLASSPATH="" JAVA_HOME="/opt/icedtea-bin-7.2.6.6"
JAVACFLAGS="-source 1.5 -target 1.5" COMPILER=""
and of course, the output of emerge --info =rstudio-0.98.490