Build log

build.log (text/x-log), 7.87 KB, created by Stephen Bosch on 2015-04-21 09:28:29 UTC

[32;01m * [39;49;00mPackage:    sci-libs/scipy-0.15.1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail]
[32;01m * [39;49;00mUSE:        abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_3 userland_GNU
[32;01m * [39;49;00mFEATURES:   sandbox userpriv usersandbox
 [32;01m*[0m Using following Fortran compiler:
 [32;01m*[0m   F77: x86_64-pc-linux-gnu-gfortran
 [32;01m*[0m   FC:  x86_64-pc-linux-gnu-gfortran
>>> Unpacking source...
>>> Unpacking scipy-0.15.1.tar.gz to /var/tmp/portage/sci-libs/scipy-0.15.1/work
>>> Source unpacked in /var/tmp/portage/sci-libs/scipy-0.15.1/work
>>> Preparing source in /var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1 ...
 [32;01m*[0m Applying scipy-0.12.0-blitz.patch ...
[A[80C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying scipy-0.12.0-restore-sys-argv.patch ...
[A[80C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Will copy sources from /var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1
 [32;01m*[0m python3_3: copying to /var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1-python3_3
 [32;01m*[0m python2_7: copying to /var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1-python2_7
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1 ...
 [32;01m*[0m python3_3: running distutils-r1_run_phase python_compile
Processing scipy/io/matlab/mio_utils.pyx
Processing scipy/io/matlab/streams.pyx
Processing scipy/io/matlab/mio5_utils.pyx
Processing scipy/special/_ufuncs.pyx
Processing scipy/special/_ufuncs_cxx.pyx
Processing scipy/special/_ellip_harm_2.pyx
Processing scipy/spatial/qhull.pyx
Processing scipy/spatial/ckdtree.pyx
Processing scipy/signal/_spectral.pyx
Processing scipy/signal/_max_len_seq.pyx
Processing scipy/interpolate/_ppoly.pyx
Processing scipy/interpolate/interpnd.pyx
Processing scipy/stats/_rank.pyx
Processing scipy/stats/vonmises_cython.pyx
Processing scipy/sparse/_csparsetools.pyx.in
Processing scipy/sparse/csgraph/_traversal.pyx
Processing scipy/sparse/csgraph/_reordering.pyx
Processing scipy/sparse/csgraph/_shortest_path.pyx
Processing scipy/sparse/csgraph/_min_spanning_tree.pyx
Processing scipy/sparse/csgraph/_tools.pyx
Processing scipy/ndimage/src/_ni_label.pyx
Processing scipy/cluster/_hierarchy.pyx
Processing scipy/cluster/_vq.pyx
/usr/bin/python3.3 setup.py build config_fc --noopt --noarch
lapack_opt_info:
system_info:
  NOT AVAILABLE

lapack_info:
  FOUND:
    library_dirs = ['/usr/lib64']
    language = f77
    libraries = ['refblas', 'reflapack']

blas_info:
  libraries openblas_threads,refblas not found in ['/usr/lib64']
  NOT AVAILABLE

blas_src_info:
  NOT AVAILABLE

  NOT AVAILABLE

/usr/lib64/python3.3/distutils/dist.py:258: UserWarning: Unknown distribution option: 'setup_requires'
  warnings.warn(msg)
/usr/lib64/python3.3/distutils/dist.py:258: UserWarning: Unknown distribution option: 'install_requires'
  warnings.warn(msg)
/usr/lib64/python3.3/distutils/dist.py:258: UserWarning: Unknown distribution option: 'test_suite'
  warnings.warn(msg)
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1419: UserWarning: 
    Atlas (http://math-atlas.sourceforge.net/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [atlas]) or by setting
    the ATLAS environment variable.
  warnings.warn(AtlasNotFoundError.__doc__)
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:568: UserWarning: Specified path  is invalid.
  warnings.warn('Specified path %s is invalid.' % d)
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1443: UserWarning: 
    Blas (http://www.netlib.org/blas/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [blas]) or by setting
    the BLAS environment variable.
  warnings.warn(BlasNotFoundError.__doc__)
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1446: UserWarning: 
    Blas (http://www.netlib.org/blas/) sources not found.
    Directories to search for the sources can be specified in the
    numpy/distutils/site.cfg file (section [blas_src]) or by setting
    the BLAS_SRC environment variable.
  warnings.warn(BlasSrcNotFoundError.__doc__)
Running from scipy source directory.
Traceback (most recent call last):
  File "setup.py", line 249, in <module>
    setup_package()
  File "setup.py", line 246, in setup_package
    setup(**metadata)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/core.py", line 135, in setup
    config = configuration()
  File "setup.py", line 173, in configuration
    config.add_subpackage('scipy')
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/setup.py", line 16, in configuration
    config.add_subpackage('linalg')
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/linalg/setup.py", line 18, in configuration
    raise NotFoundError('no lapack/blas resources found')
numpy.distutils.system_info.NotFoundError: no lapack/blas resources found
 [31;01m*[0m ERROR: sci-libs/scipy-0.15.1::gentoo failed (compile phase):
 [31;01m*[0m   (no error message)
 [31;01m*[0m 
 [31;01m*[0m Call stack:
 [31;01m*[0m     ebuild.sh, line   93:  Called src_compile
 [31;01m*[0m   environment, line 4369:  Called distutils-r1_src_compile
 [31;01m*[0m   environment, line 1482:  Called _distutils-r1_run_foreach_impl 'python_compile'
 [31;01m*[0m   environment, line  367:  Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 3815:  Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 2906:  Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 2904:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line  988:  Called distutils-r1_run_phase 'python_compile'
 [31;01m*[0m   environment, line 1475:  Called python_compile
 [31;01m*[0m   environment, line 3417:  Called distutils-r1_python_compile 'config_fc' '--noopt' '--noarch'
 [31;01m*[0m   environment, line 1360:  Called esetup.py 'build' 'config_fc' '--noopt' '--noarch'
 [31;01m*[0m   environment, line 1963:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m       "${@}" || die
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/scipy-0.15.1::gentoo'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/scipy-0.15.1::gentoo'`.
 [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.15.1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.15.1/temp/environment'.
 [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1-python3_3'
 [31;01m*[0m S: '/var/tmp/portage/sci-libs/scipy-0.15.1/work/scipy-0.15.1'