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Gentoo's Bugzilla – Attachment 398726 Details for
Bug 543032
sci-chemistry/rasmol fails to compile with format-security
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rasmol-2.7.5.2:20150312-095844.log
rasmol-2.7.5.2:20150312-095844.log (text/plain), 13.22 KB, created by
Agostino Sarubbo
on 2015-03-12 10:00:10 UTC
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Description:
rasmol-2.7.5.2:20150312-095844.log
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Creator:
Agostino Sarubbo
Created:
2015-03-12 10:00:10 UTC
Size:
13.22 KB
patch
obsolete
> * Package: sci-chemistry/rasmol-2.7.5.2 > * Repository: gentoo > * Maintainer: sci-chemistry@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU > * FEATURES: preserve-libs sandbox userpriv usersandbox > * Using following Fortran compiler: > * F77: x86_64-pc-linux-gnu-gfortran > * FC: x86_64-pc-linux-gnu-gfortran > * Applying rasmol-2.7.5.2-glib.h.patch ... > [ ok ] > * Applying 2.7.5-bundled-lib.patch ... > [ ok ] > * Adjusting to prefix / > * Imakefile ... > [ ok ] >imake -DGTKWIN -DUseInstalled -I/usr/lib64/X11/config >make: Entering directory '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/work/RasMol-2.7.5.2/src' >rm -f rasmol._man >rm -f rasmol >rm -f gtkui.h rasmol.man >rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* >make: Leaving directory '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/work/RasMol-2.7.5.2/src' >make: Entering directory '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/work/RasMol-2.7.5.2/src' >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o rasmol.o rasmol.c >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o molecule.o molecule.c >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o abstree.o abstree.c >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o cmndline.o cmndline.c >molecule.c: In function âDescribeMoleculeâ: >molecule.c:446:5: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > { sprintf(buffer," (%ld)\n",HetaAtomCount); > ^ >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o command.o command.c >abstree.c: In function âDescribeObjâ: >abstree.c:1581:6: warning: format â%ldâ expects argument of type âlong intâ, but argument 7 has type âLongâ [-Wformat=] > str[0], str[1], str[2], str[3], ptr->atm->serno ); > ^ >abstree.c:1584:6: warning: format â%ldâ expects argument of type âlong intâ, but argument 8 has type âLongâ [-Wformat=] > str[0], str[1], str[2], str[3] ,ptr->atm->altl, ptr->atm->serno ); > ^ >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o transfor.o transfor.c >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o render.o render.c >command.c: In function âShowRecordCommandâ: >command.c:1289:13: error: format not a string literal and no format arguments [-Werror=format-security] > sprintf(param,RecordTemplate); > ^ >command.c: In function âShowPlayCommandâ: >command.c:1384:13: error: format not a string literal and no format arguments [-Werror=format-security] > sprintf(param,PlayTemplate); > ^ >command.c: In function âWriteMovieFrameâ: >command.c:1472:11: error: format not a string literal and no format arguments [-Werror=format-security] > sprintf(param,RecordTemplate); > ^ >command.c: In function âPlayMovieFrameâ: >command.c:1508:17: error: format not a string literal and no format arguments [-Werror=format-security] > sprintf(param,PlayTemplate); > ^ >x86_64-pc-linux-gnu-gcc -march=native -Wformat -Werror=format-security -g0 -O2 -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-0.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/cairo -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -DGTKWIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include -I/usr/include/cbflib -c -o repres.o repres.c >command.c: In function âExecuteShowCommandâ: >command.c:4124:17: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > sprintf(buffer,"centre [%ld,%ld,%ld]\n", CenX, CenY, -CenZ); > ^ >command.c:4124:17: warning: format â%ldâ expects argument of type âlong intâ, but argument 4 has type âLongâ [-Wformat=] >command.c:4124:17: warning: format â%ldâ expects argument of type âlong intâ, but argument 5 has type âLongâ [-Wformat=] >command.c:4174:29: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > (brptr->BSrcAtom)->serno, (brptr->BDstAtom)->serno); > ^ >command.c:4174:29: warning: format â%ldâ expects argument of type âlong intâ, but argument 4 has type âLongâ [-Wformat=] >render.c: In function âDescribeAtomâ: >render.c:2048:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > cur += sprintf(cur, " (%ld)", ptr->atm->serno); > ^ >render.c: In function âPickAtomsâ: >render.c:2111:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > cur += sprintf(cur, " %ld ", QAtom->serno); > ^ >cc1: some warnings being treated as errors ><builtin>: recipe for target 'command.o' failed >make: *** [command.o] Error 1 >make: *** Waiting for unfinished jobs.... >repres.c: In function âCreateMonitorâ: >repres.c:766:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > { sprintf(buffer," %ld",dst); > ^ >repres.c:768:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > { sprintf(buffer," %ld",src); > ^ >repres.c:769:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > } else sprintf(buffer,"s %ld and %ld",src,dst); > ^ >repres.c:769:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 4 has type âLongâ [-Wformat=] >repres.c: In function âLoadDotsFileâ: >repres.c:1208:9: warning: format â%ldâ expects argument of type âlong intâ, but argument 3 has type âLongâ [-Wformat=] > { sprintf(buffer,"%ld dots read from file\n",count); > ^ >make: Leaving directory '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/work/RasMol-2.7.5.2/src' > * ERROR: sci-chemistry/rasmol-2.7.5.2::gentoo failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=sci-chemistry/rasmol-2.7.5.2::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-chemistry/rasmol-2.7.5.2::gentoo'`. > * The complete build log is located at '/var/log/log/build/sci-chemistry/rasmol-2.7.5.2:20150312-095844.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/temp/environment'. > * Working directory: '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/work/RasMol-2.7.5.2' > * S: '/var/tmp/portage/sci-chemistry/rasmol-2.7.5.2/work/RasMol-2.7.5.2'
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