--- shogun-3.2.0_orig/cmake/FindAtlas.cmake	2014-02-17 19:46:27.000000000 +0100
+++ shogun-3.2.0/cmake/FindAtlas.cmake	2014-07-21 22:05:58.000000000 +0200
@@ -3,10 +3,39 @@
 endif (ATLAS_LIBRARIES)
 
+message(STATUS "CMAKE_INCLUDE_PATH=${CMAKE_INCLUDE_PATH}")
+message(STATUS "ENV{CMAKE_CXX_FLAGS}=$ENV{CMAKE_CXX_FLAGS}")
+message(STATUS "ENV{ATLASDIR}=$ENV{ATLASDIR}")
+message(STATUS "ATLAS_LIBRARIES=${ATLAS_LIBRARIES}")
+
 find_file(ATLAS_LIB libatlas.so.3 PATHS /usr/lib /usr/lib64 $ENV{ATLASDIR} PATH_SUFFIXES atlas atlas-base)
 find_library(ATLAS_LIB atlas PATHS $ENV{ATLASDIR})
+ 
+message(STATUS "ATLAS_LIB=${ATLAS_LIB}")
+pkg_check_modules(ATLAS-CBLAS atlas-cblas)
+message(STATUS "ATLAS-CBLAS_LIBRARY_DIRS=${ATLAS-CBLAS_LIBRARY_DIRS}")
+message(STATUS "ATLAS-CBLAS_LIBRARIES=${ATLAS-CBLAS_LIBRARIES}")
+
+if(ATLAS-CBLAS_LIBRARIES)
+  find_library(ATLAS_CBLAS ${ATLAS-CBLAS_LIBRARIES}  PATHS $ENV{ATLASDIR} )
+else()
+  find_file(ATLAS_CBLAS libcblas.so.3 PATHS /usr/lib /usr/lib64 $ENV{ATLASDIR} PATH_SUFFIXES atlas atlas-base)
+  find_library(ATLAS_CBLAS cblas PATHS $ENV{ATLASDIR})
+endif()
+
+message(STATUS "ATLAS_CBLAS=${ATLAS_CBLAS}")
+
+pkg_check_modules(ATLAS-LAPACK atlas-lapack)
+message(STATUS "ATLAS-LAPACK_LIBRARY_DIRS=${ATLAS-LAPACK_LIBRARY_DIRS}")
+message(STATUS "ATLAS-LAPACK_LIBRARIES=${ATLAS-LAPACK_LIBRARIES}")
+
+message(STATUS "ATLAS-LAPACK_LIBS=${ATLAS-LAPACK_LIBS}")
 
-find_file(ATLAS_CBLAS libcblas.so.3 PATHS /usr/lib /usr/lib64 $ENV{ATLASDIR} PATH_SUFFIXES atlas atlas-base)
-find_library(ATLAS_CBLAS cblas PATHS $ENV{ATLASDIR})
+if(ATLAS-LAPACK_LIBRARIES)
+  set(ATLAS_LAPACK ${ATLAS-LAPACK_LIBRARIES})
+else()
+  find_file(ATLAS_LAPACK NAMES liblapack_atlas.so.3 PATHS /usr/lib /usr/lib64 $ENV{ATLASDIR} PATH_SUFFIXES atlas atlas-base)
+  find_library(ATLAS_LAPACK NAMES lapack_atlas alapack PATHS $ENV{ATLASDIR})
+endif()
 
-find_file(ATLAS_LAPACK NAMES liblapack_atlas.so.3 PATHS /usr/lib /usr/lib64 $ENV{ATLASDIR} PATH_SUFFIXES atlas atlas-base)
-find_library(ATLAS_LAPACK NAMES lapack_atlas alapack PATHS $ENV{ATLASDIR})
+message(STATUS "ATLAS_LAPACK(1)=${ATLAS_LAPACK}")
+message(STATUS "LAPACK_LIBRARIES=${LAPACK_LIBRARIES}")

 if(ATLAS_LAPACK)