build.log

build.log (text/plain), 13.25 KB, created by HMolina on 2014-02-27 12:17:37 UTC

[32;01m * [39;49;00mPackage:    sci-libs/scipy-0.12.1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail]
[32;01m * [39;49;00mUSE:        amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_3 userland_GNU
[32;01m * [39;49;00mFEATURES:   preserve-libs sandbox userpriv usersandbox
 [32;01m*[0m Using following Fortran compiler:
 [32;01m*[0m   F77: x86_64-pc-linux-gnu-gfortran
 [32;01m*[0m   FC:  x86_64-pc-linux-gnu-gfortran
>>> Unpacking source...
>>> Unpacking scipy-0.12.1.tar.gz to /var/tmp/portage/sci-libs/scipy-0.12.1/work
>>> Source unpacked in /var/tmp/portage/sci-libs/scipy-0.12.1/work
>>> Preparing source in /var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1 ...
 [32;01m*[0m Applying scipy-0.12.0-gerqf.patch ...
[A[204C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying scipy-0.12.0-blitz.patch ...
[A[204C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying scipy-0.12.0-restore-sys-argv.patch ...
[A[204C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying scipy-0.12.0-cephes-missing-include.patch ...
[A[204C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Will copy sources from /var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1
 [32;01m*[0m python3_3: copying to /var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1-python3_3
 [32;01m*[0m python2_7: copying to /var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1-python2_7
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1 ...
 [32;01m*[0m python3_3: running distutils-r1_run_phase python_compile
 [32;01m*[0m python2_7: running distutils-r1_run_phase python_compile
/usr/bin/python2.7 setup.py build config_fc --noopt --noarch
/usr/bin/python3.3 setup.py build config_fc --noopt --noarch
Running from scipy source directory.
blas_opt_info:
system_info:
  NOT AVAILABLE

/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py:1512: UserWarning: 
    Atlas (http://math-atlas.sourceforge.net/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [atlas]) or by setting
    the ATLAS environment variable.
  warnings.warn(AtlasNotFoundError.__doc__)
blas_info:
  libraries mkl_gf_lp64kl_sequentialkl_core,mkl_gf_lp64kl_sequentialkl_core not found in ['/opt/intel/mkl/10.0.5.025/lib/em64t', '/usr/lib64']
  NOT AVAILABLE

/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py:1521: UserWarning: 
    Blas (http://www.netlib.org/blas/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [blas]) or by setting
    the BLAS environment variable.
  warnings.warn(BlasNotFoundError.__doc__)
blas_src_info:
  NOT AVAILABLE

/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py:1524: UserWarning: 
    Blas (http://www.netlib.org/blas/) sources not found.
    Directories to search for the sources can be specified in the
    numpy/distutils/site.cfg file (section [blas_src]) or by setting
    the BLAS_SRC environment variable.
  warnings.warn(BlasSrcNotFoundError.__doc__)
Traceback (most recent call last):
  File "setup.py", line 165, in <module>
    setup_package()
  File "setup.py", line 161, in setup_package
    configuration=configuration)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/core.py", line 135, in setup
    config = configuration()
  File "setup.py", line 136, in configuration
    config.add_subpackage('scipy')
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/setup.py", line 9, in configuration
    config.add_subpackage('integrate')
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/integrate/setup.py", line 11, in configuration
    blas_opt = get_info('blas_opt',notfound_action=2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py", line 340, in get_info
    return cl().get_info(notfound_action)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py", line 499, in get_info
    raise self.notfounderror(self.notfounderror.__doc__)
numpy.distutils.system_info.BlasNotFoundError: 
    Blas (http://www.netlib.org/blas/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [blas]) or by setting
    the BLAS environment variable.
 [31;01m*[0m ERROR: sci-libs/scipy-0.12.1::gentoo failed (compile phase):
 [31;01m*[0m   (no error message)
 [31;01m*[0m 
 [31;01m*[0m Call stack:
 [31;01m*[0m     ebuild.sh, line   93:  Called src_compile
 [31;01m*[0m   environment, line 3956:  Called distutils-r1_src_compile
 [31;01m*[0m   environment, line 1427:  Called _distutils-r1_run_foreach_impl 'python_compile'
 [31;01m*[0m   environment, line  281:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
blas_opt_info:
system_info:
  NOT AVAILABLE

 [31;01m*[0m   environment, line 3690:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
blas_info:
  libraries mkl_gf_lp64kl_sequentialkl_core,mkl_gf_lp64kl_sequentialkl_core not found in ['/opt/intel/mkl/10.0.5.025/lib/em64t', '/usr/lib64']
  NOT AVAILABLE

blas_src_info:
  NOT AVAILABLE

Running from scipy source directory.
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1512: UserWarning: 
    Atlas (http://math-atlas.sourceforge.net/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [atlas]) or by setting
    the ATLAS environment variable.
  warnings.warn(AtlasNotFoundError.__doc__)
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1521: UserWarning: 
    Blas (http://www.netlib.org/blas/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [blas]) or by setting
    the BLAS environment variable.
  warnings.warn(BlasNotFoundError.__doc__)
/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1524: UserWarning: 
    Blas (http://www.netlib.org/blas/) sources not found.
    Directories to search for the sources can be specified in the
    numpy/distutils/site.cfg file (section [blas_src]) or by setting
    the BLAS_SRC environment variable.
  warnings.warn(BlasSrcNotFoundError.__doc__)
Traceback (most recent call last):
  File "setup.py", line 165, in <module>
    setup_package()
  File "setup.py", line 161, in setup_package
    configuration=configuration)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/core.py", line 135, in setup
    config = configuration()
  File "setup.py", line 136, in configuration
    config.add_subpackage('scipy')
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/setup.py", line 9, in configuration
    config.add_subpackage('integrate')
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/integrate/setup.py", line 11, in configuration
    blas_opt = get_info('blas_opt',notfound_action=2)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", line 340, in get_info
    return cl().get_info(notfound_action)
  File "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", line 499, in get_info
    raise self.notfounderror(self.notfounderror.__doc__)
numpy.distutils.system_info.BlasNotFoundError: 
    Blas (http://www.netlib.org/blas/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [blas]) or by setting
    the BLAS environment variable.
 [31;01m*[0m   environment, line 2852:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 2800:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 2798:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m ERROR: sci-libs/scipy-0.12.1::gentoo failed (compile phase):
 [31;01m*[0m   (no error message)
 [31;01m*[0m   environment, line 2843:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m 
 [31;01m*[0m Call stack:
 [31;01m*[0m   environment, line  874:  Called distutils-r1_run_phase 'python_compile'
 [31;01m*[0m     ebuild.sh, line   93:  Called src_compile
 [31;01m*[0m   environment, line 3956:  Called distutils-r1_src_compile
 [31;01m*[0m   environment, line 1418:  Called python_compile
 [31;01m*[0m   environment, line 1427:  Called _distutils-r1_run_foreach_impl 'python_compile'
 [31;01m*[0m   environment, line 3276:  Called distutils-r1_python_compile 'config_fc' '--noopt' '--noarch'
 [31;01m*[0m   environment, line  281:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 1301:  Called esetup.py 'build' 'config_fc' '--noopt' '--noarch'
 [31;01m*[0m   environment, line 1868:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m   environment, line 3690:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 2852:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m   environment, line 2800:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m       "${@}" || die
 [31;01m*[0m 
 [31;01m*[0m   environment, line 2798:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/scipy-0.12.1::gentoo'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/scipy-0.12.1::gentoo'`.
 [31;01m*[0m   environment, line 2843:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.12.1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.12.1/temp/environment'.
 [31;01m*[0m   environment, line  874:  Called distutils-r1_run_phase 'python_compile'
 [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1-python2_7'
 [31;01m*[0m S: '/var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1'
 [31;01m*[0m   environment, line 1418:  Called python_compile
 [31;01m*[0m   environment, line 3276:  Called distutils-r1_python_compile 'config_fc' '--noopt' '--noarch'
 [31;01m*[0m   environment, line 1301:  Called esetup.py 'build' 'config_fc' '--noopt' '--noarch'
 [31;01m*[0m   environment, line 1868:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m       "${@}" || die
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/scipy-0.12.1::gentoo'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/scipy-0.12.1::gentoo'`.
 [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.12.1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.12.1/temp/environment'.
 [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1-python3_3'
 [31;01m*[0m S: '/var/tmp/portage/sci-libs/scipy-0.12.1/work/scipy-0.12.1'
/usr/lib64/portage/bin/isolated-functions.sh: line 219: kill: (9697) - No such process