/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/temp/build.log

build.log (text/plain), 20.03 KB, created by Juergen Rose on 2014-01-25 13:24:24 UTC

[32;01m * [39;49;00mPackage:    sci-libs/netcdf-cxx-4.2-r300
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail]
[32;01m * [39;49;00mUSE:        amd64 elibc_glibc examples kernel_linux userland_GNU
[32;01m * [39;49;00mFEATURES:   preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking netcdf-cxx-4.2.tar.gz to /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work
>>> Source unpacked in /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work
>>> Preparing source in /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2 ...
 [32;01m*[0m Running elibtoolize in: netcdf-cxx-4.2/
 [32;01m*[0m   Applying portage/2.2 patch ...
 [32;01m*[0m   Applying sed/1.5.6 patch ...
 [32;01m*[0m   Applying as-needed/2.2.6 patch ...
 [32;01m*[0m   Applying target-nm/2.4.2 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build"
 * econf: updating netcdf-cxx-4.2/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating netcdf-cxx-4.2/config.sub with /usr/share/gnuconfig/config.sub
/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-dependency-tracking --docdir=/usr/share/doc/netcdf-cxx-4.2-r300 --enable-shared --disable-static
configure: loading site script /usr/share/config.site
configure: netCDF-cxx 4.2
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking target system type... x86_64-pc-linux-gnu
checking for a BSD-compatible install... /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
configure: checking user options
checking whether extra valgrind tests should be run... no
checking whether netCDF extra tests should be run (developers only)... no
checking whether large file (> 2GB) tests should be run... no
checking where to put large temp files if large file tests are run... .
configure: finding C++ compiler (will not be used if C++ API is not desired)
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of x86_64-pc-linux-gnu-g++... none
configure: setting up libtool
checking how to print strings... printf
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking dependency style of x86_64-pc-linux-gnu-gcc... none
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
configure: finding other utilities
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for library containing nc_open... -lnetcdf
checking for nc_def_opaque... yes
checking for nccreate... yes
checking for nc_set_log_level... no
checking for nc_use_parallel_enabled... yes
configure: generating header files and makefiles
configure: creating ./config.status
config.status: creating Makefile
config.status: creating man4/Makefile
config.status: creating cxx/Makefile
config.status: creating examples/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build"
make -j3 
make  all-recursive
make[1]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
Making all in cxx
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/cxx'
/bin/sh ../libtool  --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx -I..     -march=native -O2 -pipe -c -o libnetcdf_c___la-netcdf.lo `test -f 'netcdf.cpp' || echo '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/'`netcdf.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx -I..     -march=native -O2 -pipe -c -o libnetcdf_c___la-ncvalues.lo `test -f 'ncvalues.cpp' || echo '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/'`ncvalues.cpp
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx -I.. -march=native -O2 -pipe -c /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/netcdf.cpp  -fPIC -DPIC -o .libs/libnetcdf_c___la-netcdf.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx -I.. -march=native -O2 -pipe -c /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/ncvalues.cpp  -fPIC -DPIC -o .libs/libnetcdf_c___la-ncvalues.o
/bin/sh ../libtool --tag=CXX   --mode=link x86_64-pc-linux-gnu-g++  -march=native -O2 -pipe -version-number 4:2:0 -Wl,-O1 -Wl,--as-needed -o libnetcdf_c++.la -rpath /usr/lib64 libnetcdf_c___la-netcdf.lo libnetcdf_c___la-ncvalues.lo  -lnetcdf 
libtool: link: x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/crtbeginS.o  .libs/libnetcdf_c___la-netcdf.o .libs/libnetcdf_c___la-ncvalues.o   -Wl,--as-needed -lnetcdf -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../../../lib64/crtn.o  -march=native -Wl,-O1   -Wl,-soname -Wl,libnetcdf_c++.so.4 -o .libs/libnetcdf_c++.so.4.2.0
libtool: link: (cd ".libs" && rm -f "libnetcdf_c++.so.4" && ln -s "libnetcdf_c++.so.4.2.0" "libnetcdf_c++.so.4")
libtool: link: (cd ".libs" && rm -f "libnetcdf_c++.so" && ln -s "libnetcdf_c++.so.4.2.0" "libnetcdf_c++.so")
libtool: link: ( cd ".libs" && rm -f "libnetcdf_c++.la" && ln -s "../libnetcdf_c++.la" "libnetcdf_c++.la" )
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/cxx'
Making all in examples
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/examples'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/examples'
Making all in man4
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/man4'
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/man4'
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
make[2]: Nothing to be done for 'all-am'.
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
make[1]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
>>> Source compiled.
>>> Test phase [not enabled]: sci-libs/netcdf-cxx-4.2-r300

>>> Install netcdf-cxx-4.2-r300 into /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image/ category sci-libs
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build"
make -j3 DESTDIR=/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image/ install 
Making install in cxx
make[1]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/cxx'
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/cxx'
test -z "/usr/lib64" || /usr/bin/mkdir -p "/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/lib64"
test -z "/usr/include" || /usr/bin/mkdir -p "/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/include"
 /bin/sh ../libtool   --mode=install /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c   libnetcdf_c++.la '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/lib64'
 /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c -m 644 /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/netcdfcpp.h /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/ncvalues.h /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/cxx/netcdf.hh '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/include'
libtool: install: /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c .libs/libnetcdf_c++.so.4.2.0 /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/lib64/libnetcdf_c++.so.4.2.0
libtool: install: (cd /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/lib64 && { ln -s -f libnetcdf_c++.so.4.2.0 libnetcdf_c++.so.4 || { rm -f libnetcdf_c++.so.4 && ln -s libnetcdf_c++.so.4.2.0 libnetcdf_c++.so.4; }; })
libtool: install: (cd /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/lib64 && { ln -s -f libnetcdf_c++.so.4.2.0 libnetcdf_c++.so || { rm -f libnetcdf_c++.so && ln -s libnetcdf_c++.so.4.2.0 libnetcdf_c++.so; }; })
libtool: install: /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c .libs/libnetcdf_c++.lai /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/lib64/libnetcdf_c++.la
libtool: install: warning: remember to run `libtool --finish /usr/lib64'
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/cxx'
make[1]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/cxx'
Making install in examples
make[1]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/examples'
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/examples'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/examples'
make[1]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/examples'
Making install in man4
make[1]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/man4'
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/man4'
make[2]: Nothing to be done for 'install-exec-am'.
test -z "/usr/share/info" || /usr/bin/mkdir -p "/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/share/info"
 /usr/lib64/portage/bin/ebuild-helpers/xattr/install -c -m 644 /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2/man4/netcdf-cxx.info '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/share/info'
 install-info --info-dir='/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/share/info' '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image//usr/share/info/netcdf-cxx.info'
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/man4'
make[1]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build/man4'
make[1]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
make[2]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
make[2]: Nothing to be done for 'install-exec-am'.
make  install-data-hook
make[3]: Entering directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'

+-------------------------------------------------------------+
| Congratulations! You have successfully installed the netCDF |
| C++ Libaray                                                 |
|                                                             |
| CAUTION:                                                    |
|                                                             |
| If you have not already run "make check", then we strongly  |
| recommend you do so. It does not take very long.            |
|                                                             |
| Before using netCDF to store important data, test your      |
| build with "make check".                                    |
|                                                             |
| NetCDF is tested nightly on many platforms at Unidata       |
| but your platform is probably different in some ways.       |
|                                                             |
| If any tests fail, please see the netCDF web site:          |
| http://www.unidata.ucar.edu/software/netcdf/                |
|                                                             |
| NetCDF is developed and maintained at the Unidata Program   |
| Center. Unidata provides a broad array of data and software |
| tools for use in geoscience education and research.         |
| http://www.unidata.ucar.edu                                 |
+-------------------------------------------------------------+

make[3]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
make[2]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
make[1]: Leaving directory '/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/work/netcdf-cxx-4.2_build'
 [32;01m*[0m Removing unnecessary /usr/lib64/libnetcdf_c++.la (no static archive)
>>> Completed installing netcdf-cxx-4.2-r300 into /var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/image/

strip: x86_64-pc-linux-gnu-strip --strip-unneeded -R .comment -R .GCC.command.line -R .note.gnu.gold-version
   usr/lib64/libnetcdf_c++.so.4.2.0
ecompressdir: bzip2 -9 /usr/share/doc
ecompressdir: bzip2 -9 /usr/share/info
[31;01m * [39;49;00mThis package will overwrite one or more files that may belong to other
[31;01m * [39;49;00mpackages (see list below). You can use a command such as `portageq
[31;01m * [39;49;00mowners / <filename>` to identify the installed package that owns a
[31;01m * [39;49;00mfile. If portageq reports that only one package owns a file then do
[31;01m * [39;49;00mNOT file a bug report. A bug report is only useful if it identifies at
[31;01m * [39;49;00mleast two or more packages that are known to install the same file(s).
[31;01m * [39;49;00mIf a collision occurs and you can not explain where the file came from
[31;01m * [39;49;00mthen you should simply ignore the collision since there is not enough
[31;01m * [39;49;00minformation to determine if a real problem exists. Please do NOT file
[31;01m * [39;49;00ma bug report at http://bugs.gentoo.org unless you report exactly which
[31;01m * [39;49;00mtwo packages install the same file(s). See
[31;01m * [39;49;00mhttp://wiki.gentoo.org/wiki/Knowledge_Base:Blockers for tips on how to
[31;01m * [39;49;00msolve the problem. And once again, please do NOT file a bug report
[31;01m * [39;49;00munless you have completely understood the above message.
[31;01m * [39;49;00m
[31;01m * [39;49;00mDetected file collision(s):
[31;01m * [39;49;00m
[31;01m * [39;49;00m	/usr/lib64/libnetcdf_c++.so.4
[31;01m * [39;49;00m
[31;01m * [39;49;00mSearching all installed packages for file collisions...
[31;01m * [39;49;00m
[31;01m * [39;49;00mPress Ctrl-C to Stop
[31;01m * [39;49;00m
[31;01m * [39;49;00msci-libs/netcdf-4.3.0:0::gentoo
[31;01m * [39;49;00m	/usr/lib64/libnetcdf_c++.so.4
[31;01m * [39;49;00m
[31;01m * [39;49;00mPackage 'sci-libs/netcdf-cxx-4.2-r300' NOT merged due to file
[31;01m * [39;49;00mcollisions. If necessary, refer to your elog messages for the whole
[31;01m * [39;49;00mcontent of the above message.