automake.out

automake.out (text/plain), 8.67 KB, created by Sergey Popov on 2014-01-23 14:24:02 UTC

***** automake *****
***** PWD: /var/tmp/portage/sci-biology/cufflinks-1.3.0/work/cufflinks-1.3.0
***** automake --add-missing --copy --foreign

sh: svnversion: command not found
configure.ac:36: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from...
../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from...
../../lib/m4sugar/m4sh.m4:639: AS_IF is expanded from...
../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from...
../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from...
ax_boost_thread.m4:32: AX_BOOST_THREAD is expanded from...
configure.ac:36: the top level
configure.ac:30: installing 'build-aux/ar-lib'
configure.ac:28: installing 'build-aux/compile'
automake-1.14: warnings are treated as errors
src/Makefile.am:107: warning: source file 'locfit/adap.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
automake-1.14: warning: possible forward-incompatibility.
automake-1.14: At least a source file is in a subdirectory, but the 'subdir-objects'
automake-1.14: automake option hasn't been enabled.  For now, the corresponding output
automake-1.14: object file(s) will be placed in the top-level directory.  However,
automake-1.14: this behaviour will change in future Automake versions: they will
automake-1.14: unconditionally cause object files to be placed in the same subdirectory
automake-1.14: of the corresponding sources.
automake-1.14: You are advised to start using 'subdir-objects' option throughout your
automake-1.14: project, to avoid future incompatibilities.
src/Makefile.am:107: warning: source file 'locfit/ar_funs.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/arith.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/band.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/c_args.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/c_plot.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/cmd.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/dens_haz.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/dens_int.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/dens_odi.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/density.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/dist.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/ev_atree.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/ev_interp.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/ev_kdtre.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/ev_main.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/ev_trian.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/family.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/fitted.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/frend.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/help.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/lf_dercor.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/lf_fitfun.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/lf_robust.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/lf_vari.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/lfd.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/lfstr.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/linalg.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/locfit.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/m_chol.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/m_eigen.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/m_jacob.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/m_max.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/makecmd.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/math.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/minmax.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/nbhd.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/pcomp.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/pout.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/preplot.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/random.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/readfile.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/scb.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/scb_cons.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/simul.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/solve.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/startlf.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/strings.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/vari.cpp' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/wdiag.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled
src/Makefile.am:107: warning: source file 'locfit/weight.c' is in a subdirectory,
src/Makefile.am:107: but option 'subdir-objects' is disabled