tamu_anova-0.2.1:20130404-001303.log

tamu_anova-0.2.1:20130404-001303.log (text/plain), 14.83 KB, created by Justin Lecher (RETIRED) on 2013-04-04 06:09:07 UTC

[32;01m * [39;49;00mPackage:    sci-libs/tamu_anova-0.2.1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail] [e-mail]
[32;01m * [39;49;00mUSE:        abi_x86_64 amd64 elibc_glibc kernel_linux multilib userland_GNU
[32;01m * [39;49;00mFEATURES:   ccache preserve-libs sandbox splitdebug userpriv usersandbox
>>> Unpacking source...
>>> Unpacking tamu_anova-0.2.1.tar.gz to /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work
>>> Source unpacked in /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work
>>> Preparing source in /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 ...
 [32;01m*[0m Applying 0.2.1-gentoo.patch ...
[A[151C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running eautoreconf in '/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2' ...
 [32;01m*[0m Running libtoolize --install --copy --force --automake ...
[A[151C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running aclocal ...
[A[151C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running autoconf ...
[A[151C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running autoheader ...
[A[151C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running automake --add-missing --copy ...
[A[151C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running elibtoolize in: tamu_anova-0.2/
 [32;01m*[0m   Applying portage/1.2.0 patch ...
 [32;01m*[0m   Applying sed/1.5.6 patch ...
 [32;01m*[0m   Applying as-needed/2.4.2 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2.1_build"
 * econf: updating tamu_anova-0.2/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating tamu_anova-0.2/config.guess with /usr/share/gnuconfig/config.guess
/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --docdir=/usr/share/doc/tamu_anova-0.2.1 --enable-shared --disable-static
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make sets $(MAKE)... (cached) yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 3458764513820540925
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
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checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sysroot... no
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
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checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-pc-linux-gnu-pkg-config... /usr/bin/x86_64-pc-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GSL... yes
checking for x86_64-pc-linux-gnu-gcc... (cached) x86_64-pc-linux-gnu-gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... (cached) yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... (cached) none needed
checking for x86_64-pc-linux-gnu-ranlib... (cached) x86_64-pc-linux-gnu-ranlib
checking for ANSI C header files... (cached) yes
checking for stdlib.h... (cached) yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: executing libtool commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2.1_build"
make -j16 -l9 
make  all-am
make[1]: Entering directory `/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2.1_build'
/bin/sh ./libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2     -O2 -pipe -ftracer -march=corei7-avx -mtune=corei7-avx -mcx16 -msahf -mno-movbe -maes -mpclmul -mpopcnt -mno-abm -mno-lwp -mno-fma -mno-fma4 -mno-xop -mno-bmi -mno-bmi2 -mno-tbm -mavx -mno-avx2 -msse4.2 -msse4.1 -mno-lzcnt -mno-rdrnd -mno-f16c -mno-fsgsbase --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -frecord-gcc-switches -g -Wimplicit-function-declaration -c -o anova_1.lo /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/anova_1.c
/bin/sh ./libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2     -O2 -pipe -ftracer -march=corei7-avx -mtune=corei7-avx -mcx16 -msahf -mno-movbe -maes -mpclmul -mpopcnt -mno-abm -mno-lwp -mno-fma -mno-fma4 -mno-xop -mno-bmi -mno-bmi2 -mno-tbm -mavx -mno-avx2 -msse4.2 -msse4.1 -mno-lzcnt -mno-rdrnd -mno-f16c -mno-fsgsbase --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -frecord-gcc-switches -g -Wimplicit-function-declaration -c -o anova_2.lo /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/anova_2.c
Updating /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/version-ref.texi
libtool: compile:  x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 -O2 -pipe -ftracer -march=corei7-avx -mtune=corei7-avx -mcx16 -msahf -mno-movbe -maes -mpclmul -mpopcnt -mno-abm -mno-lwp -mno-fma -mno-fma4 -mno-xop -mno-bmi -mno-bmi2 -mno-tbm -mavx -mno-avx2 -msse4.2 -msse4.1 -mno-lzcnt -mno-rdrnd -mno-f16c -mno-fsgsbase --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -frecord-gcc-switches -g -Wimplicit-function-declaration -c /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/anova_1.c  -fPIC -DPIC -o .libs/anova_1.o
libtool: compile:  x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 -O2 -pipe -ftracer -march=corei7-avx -mtune=corei7-avx -mcx16 -msahf -mno-movbe -maes -mpclmul -mpopcnt -mno-abm -mno-lwp -mno-fma -mno-fma4 -mno-xop -mno-bmi -mno-bmi2 -mno-tbm -mavx -mno-avx2 -msse4.2 -msse4.1 -mno-lzcnt -mno-rdrnd -mno-f16c -mno-fsgsbase --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -frecord-gcc-switches -g -Wimplicit-function-declaration -c /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/anova_2.c  -fPIC -DPIC -o .libs/anova_2.o
/bin/sh ./libtool --tag=CC   --mode=link x86_64-pc-linux-gnu-gcc  -O2 -pipe -ftracer -march=corei7-avx -mtune=corei7-avx -mcx16 -msahf -mno-movbe -maes -mpclmul -mpopcnt -mno-abm -mno-lwp -mno-fma -mno-fma4 -mno-xop -mno-bmi -mno-bmi2 -mno-tbm -mavx -mno-avx2 -msse4.2 -msse4.1 -mno-lzcnt -mno-rdrnd -mno-f16c -mno-fsgsbase --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -frecord-gcc-switches -g -Wimplicit-function-declaration  -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--hash-style=gnu -Wl,--sort-common -o libtamuanova.la -rpath /usr/lib64 anova_1.lo anova_2.lo -lgsl -lgslcblas -lm  
libtool: link: x86_64-pc-linux-gnu-gcc -shared  -fPIC -DPIC  .libs/anova_1.o .libs/anova_2.o   -Wl,--as-needed -lgsl -lgslcblas -lm  -O2 -march=corei7-avx -mtune=corei7-avx -mcx16 -msahf -mno-movbe -maes -mpclmul -mpopcnt -mno-abm -mno-lwp -mno-fma -mno-fma4 -mno-xop -mno-bmi -mno-bmi2 -mno-tbm -mavx -mno-avx2 -msse4.2 -msse4.1 -mno-lzcnt -mno-rdrnd -mno-f16c -mno-fsgsbase -Wl,-O1 -Wl,-O1 -Wl,--hash-style=gnu -Wl,--sort-common   -Wl,-soname -Wl,libtamuanova.so.0 -o .libs/libtamuanova.so.0.0.0
libtool: link: (cd ".libs" && rm -f "libtamuanova.so.0" && ln -s "libtamuanova.so.0.0.0" "libtamuanova.so.0")
libtool: link: (cd ".libs" && rm -f "libtamuanova.so" && ln -s "libtamuanova.so.0.0.0" "libtamuanova.so")
libtool: link: ( cd ".libs" && rm -f "libtamuanova.la" && ln -s "../libtamuanova.la" "libtamuanova.la" )
make[1]: Leaving directory `/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2.1_build'
>>> Source compiled.
>>> Test phase [not enabled]: sci-libs/tamu_anova-0.2.1

>>> Install tamu_anova-0.2.1 into /var/tmp/portage/sci-libs/tamu_anova-0.2.1/image/ category sci-libs
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2.1_build"
make -j16 -l9 DESTDIR=/var/tmp/portage/sci-libs/tamu_anova-0.2.1/image/ install 
restore=: && backupdir=".am$$" && \
am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 && \
rm -rf $backupdir && mkdir $backupdir && \
if (/bin/sh /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/missing --run makeinfo --version) >/dev/null 2>&1; then \
  for f in /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.info /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.info-[0-9] /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.info-[0-9][0-9] /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.i[0-9] /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.i[0-9][0-9]; do \
    if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \
  done; \
else :; fi && \
cd "$am__cwd"; \
if /bin/sh /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/missing --run makeinfo   -I /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 \
 -o /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.info /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.texi; \
then \
  rc=0; \
  CDPATH="${ZSH_VERSION+.}:" && cd /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2; \
else \
  rc=$?; \
  CDPATH="${ZSH_VERSION+.}:" && cd /var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2 && \
  $restore $backupdir/* `echo ".//var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.info" | sed 's|[^/]*$||'`; \
fi; \
rm -rf $backupdir; exit $rc
/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.texi:180: warning: missing name for @deftypefn
/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.texi:188: warning: missing name for @deftypefn
/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/fdl.texi:406: raising the section level of @unnumberedsubsec which is too low
mv: cannot move ‘.am10797/tamu_anova.info’ to ‘.//var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/’: No such file or directory
make: *** [/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2/tamu_anova.info] Error 1
 [31;01m*[0m ERROR: sci-libs/tamu_anova-0.2.1 failed (install phase):
 [31;01m*[0m   emake failed
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/tamu_anova-0.2.1'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/tamu_anova-0.2.1'`.
 [31;01m*[0m The complete build log is located at '/var/log/portage/build/sci-libs/tamu_anova-0.2.1:20130404-001303.log'.
 [31;01m*[0m For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/tamu_anova-0.2.1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/tamu_anova-0.2.1/temp/environment'.
 [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2.1_build'
 [31;01m*[0m S: '/var/tmp/portage/sci-libs/tamu_anova-0.2.1/work/tamu_anova-0.2'