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Gentoo's Bugzilla – Attachment 335914 Details for
Bug 452672
[science overlay] sci-mathematics/scilab-5.3.3-r1 - checking minimal version (1.8.4) of hdf5... configure: error: Wrong version of hdf5. Expected at least 1.8.4. Found 1.8.10
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/var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config.log
config.log (text/plain), 45.23 KB, created by
Juergen Rose
on 2013-01-17 14:26:08 UTC
(
hide
)
Description:
/var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config.log
Filename:
MIME Type:
Creator:
Juergen Rose
Created:
2013-01-17 14:26:08 UTC
Size:
45.23 KB
patch
obsolete
>This file contains any messages produced by compilers while >running configure, to aid debugging if configure makes a mistake. > >It was created by Scilab configure 5, which was >generated by GNU Autoconf 2.69. Invocation command line was > > $ ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-dependency-tracking --enable-relocatable --disable-rpath --with-docbook=/usr/share/sgml/docbook/xsl-stylesheets --without-pvm --disable-debug --disable-code-coverage --disable-debug-C --disable-debug-CXX --disable-debug-fortran --disable-debug-java --disable-debug-linker --enable-build-help --enable-nls --enable-build-localization --disable-static --disable-compilation-tests --with-fftw --with-gui --with-javasci --with-hdf5 --with-matio --with-openmp --with-tk --with-umfpack --with-xcos --with-modelica > >## --------- ## >## Platform. ## >## --------- ## > >hostname = moose >uname -m = x86_64 >uname -r = 3.7.1-gentoo >uname -s = Linux >uname -v = #1 SMP Fri Dec 21 17:21:20 CET 2012 > >/usr/bin/uname -p = Intel(R) Core(TM)2 Quad CPU Q9650 @ 3.00GHz >/bin/uname -X = unknown > >/bin/arch = unknown >/usr/bin/arch -k = unknown >/usr/convex/getsysinfo = unknown >/usr/bin/hostinfo = unknown >/bin/machine = unknown >/usr/bin/oslevel = unknown >/bin/universe = unknown > >PATH: /usr/lib64/icedtea7/bin >PATH: /usr/lib64/portage/bin/ebuild-helpers >PATH: /usr/local/sbin >PATH: /usr/local/bin >PATH: /usr/sbin >PATH: /usr/bin >PATH: /sbin >PATH: /bin >PATH: /opt/bin >PATH: /usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 >PATH: /usr/x86_64-pc-linux-gnu/avr/gcc-bin/4.5.3 >PATH: /opt/nvidia-cg-toolkit/bin >PATH: /usr/lib64/subversion/bin >PATH: /opt/eagle-5.11.0/bin >PATH: /opt/cuda/bin > > >## ----------- ## >## Core tests. ## >## ----------- ## > >configure:2921: loading site script /usr/share/config.site >| #!/bin/bash >| # Copyright 2009 Gentoo Foundation >| # Distributed under the terms of the GNU General Public License v2 >| >| TOPDIR=/usr/share/crossdev/include/site >| >| config_site_arch() { >| local host=$(echo ${CHOST/-/ } | awk '{print $1}') >| >| [[ ${host/arm.*eb/} != ${host} ]] && host=armeb >| [[ ${host/arm/} != ${host} ]] && [[ ${host} != armeb ]] && host=arm >| >| [[ ${host/mips.*el/} != ${host} ]] && host=mipsel >| >| #[[ ${host/i[4-5]/6} != ${host} ]] && host=i686 >| >| echo ${host} >| } >| >| config_site_names() { >| local site_arch=$(config_site_arch) >| local sites="" >| local x >| >| [[ ${CHOST/-linux-/} != $CHOST ]] && sites+=" linux ${site_arch}-linux" >| [[ ${CHOST/darwin/} != $CHOST ]] && sites+=" darwin ${site_arch}-linux" >| >| [[ ${CHOST/-linux-uclibc/} != $CHOST ]] && sites+=" linux-uclibc ${site_arch}-linux-uclibc" >| [[ ${CHOST/-linux-gnu/} != $CHOST ]] && sites+=" linux-gnu ${site_arch}-linux-gnu" >| >| [[ ${CHOST/-linux-uclibceabi/} != $CHOST ]] && sites+=" linux-uclibceabi ${site_arch}-linux-uclibceabi" >| [[ ${CHOST/-linux-gnueabi/} != $CHOST ]] && sites+=" linux-gnueabi ${site_arch}-linux-gnueabi" >| >| for x in ${sites} ${CHOST}; do >| [[ -e ${TOPDIR}/${x} ]] && echo ${TOPDIR}/${x} >| done >| } >| >| # Only kick in for cross-compiles so we don't break native builds #427184 >| if [[ ${CBUILD:-${CHOST}} != ${CHOST} ]]; then >| sites="$(config_site_names)" >| if [[ ${sites} != "" ]]; then >| for site in ${sites}; do >| echo "$(basename $0): loading site script ${site}" >| . ${site} >| done >| fi >| unset site >| unset sites >| fi >configure:3210: checking whether ln -s works >configure:3214: result: yes >configure:3230: checking for x86_64-pc-linux-gnu-gcc >configure:3257: result: mpicc >configure:3526: checking for C compiler version >configure:3535: mpicc --version >&5 >x86_64-pc-linux-gnu-gcc (Gentoo 4.6.3 p1.10, pie-0.5.2) 4.6.3 >Copyright (C) 2011 Free Software Foundation, Inc. >This is free software; see the source for copying conditions. There is NO >warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. > >configure:3546: $? = 0 >configure:3535: mpicc -v >&5 >Using built-in specs. >COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3/x86_64-pc-linux-gnu-gcc >COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.6.3/lto-wrapper >Target: x86_64-pc-linux-gnu >Configured with: /var/tmp/portage/sys-devel/gcc-4.6.3/work/gcc-4.6.3/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --enable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/python --enable-checking=release --enable-java-awt=gtk --enable-libstdcxx-time --enable-languages=c,c++,java,objc,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.6.3 p1.10, pie-0.5.2' >Thread model: posix >gcc version 4.6.3 (Gentoo 4.6.3 p1.10, pie-0.5.2) >configure:3546: $? = 0 >configure:3535: mpicc -V >&5 >x86_64-pc-linux-gnu-gcc: error: unrecognized option '-V' >x86_64-pc-linux-gnu-gcc: fatal error: no input files >compilation terminated. >configure:3546: $? = 1 >configure:3535: mpicc -qversion >&5 >x86_64-pc-linux-gnu-gcc: error: unrecognized option '-qversion' >x86_64-pc-linux-gnu-gcc: fatal error: no input files >compilation terminated. >configure:3546: $? = 1 >configure:3566: checking whether the C compiler works >configure:3588: mpicc -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >configure:3592: $? = 0 >configure:3640: result: yes >configure:3643: checking for C compiler default output file name >configure:3645: result: a.out >configure:3651: checking for suffix of executables >configure:3658: mpicc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >configure:3662: $? = 0 >configure:3684: result: >configure:3706: checking whether we are cross compiling >configure:3714: mpicc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >configure:3718: $? = 0 >configure:3725: ./conftest >configure:3729: $? = 0 >configure:3744: result: no >configure:3749: checking for suffix of object files >configure:3771: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:3775: $? = 0 >configure:3796: result: o >configure:3800: checking whether we are using the GNU C compiler >configure:3819: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:3819: $? = 0 >configure:3828: result: yes >configure:3837: checking whether mpicc accepts -g >configure:3857: mpicc -c -g conftest.c >&5 >configure:3857: $? = 0 >configure:3898: result: yes >configure:3915: checking for mpicc option to accept ISO C89 >configure:3978: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:3978: $? = 0 >configure:3991: result: none needed >configure:4020: checking for special C compiler options needed for large files >configure:4065: result: no >configure:4071: checking for _FILE_OFFSET_BITS value needed for large files >configure:4096: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:4096: $? = 0 >configure:4128: result: no >configure:4214: checking for _LARGEFILE64_SOURCE value needed for large files >configure:4237: mpicc -c -march=native -O2 -pipe conftest.c >&5 >conftest.c: In function 'main': >conftest.c:18:68: error: 'O_LARGEFILE' undeclared (first use in this function) >conftest.c:18:68: note: each undeclared identifier is reported only once for each function it appears in >configure:4237: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| /* end confdefs.h. */ >| >| #include <sys/types.h> >| #include <sys/stat.h> >| #include <fcntl.h> >| >| int >| main () >| { >| >| int fd = open ("__o_largefile", O_CREAT | O_RDWR | O_LARGEFILE, 0644); >| >| ; >| return 0; >| } >configure:4261: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:4261: $? = 0 >configure:4276: result: yes >configure:4316: checking for a BSD-compatible install >configure:4384: result: /usr/bin/install -c >configure:4399: checking build system type >configure:4413: result: x86_64-pc-linux-gnu >configure:4433: checking host system type >configure:4446: result: x86_64-pc-linux-gnu >configure:4490: checking for ld used by GCC >configure:4554: result: /usr/x86_64-pc-linux-gnu/bin/ld >configure:4561: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld >configure:4574: result: yes >configure:4580: checking for shared library path variable >configure:4593: result: LD_LIBRARY_PATH >configure:4598: checking whether to activate relocatable installation >configure:4613: result: yes >configure:4635: checking how to run the C preprocessor >configure:4666: mpicc -E conftest.c >configure:4666: $? = 0 >configure:4680: mpicc -E conftest.c >conftest.c:10:28: fatal error: ac_nonexistent.h: No such file or directory >compilation terminated. >configure:4680: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| #define INSTALLPREFIX "/usr" >| /* end confdefs.h. */ >| #include <ac_nonexistent.h> >configure:4705: result: mpicc -E >configure:4725: mpicc -E conftest.c >configure:4725: $? = 0 >configure:4739: mpicc -E conftest.c >conftest.c:10:28: fatal error: ac_nonexistent.h: No such file or directory >compilation terminated. >configure:4739: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| #define INSTALLPREFIX "/usr" >| /* end confdefs.h. */ >| #include <ac_nonexistent.h> >configure:4768: checking for grep that handles long lines and -e >configure:4826: result: /bin/grep >configure:4831: checking for egrep >configure:4893: result: /bin/grep -E >configure:4898: checking for ANSI C header files >configure:4918: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:4918: $? = 0 >configure:4991: mpicc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >configure:4991: $? = 0 >configure:4991: ./conftest >configure:4991: $? = 0 >configure:5002: result: yes >configure:5015: checking for sys/types.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for sys/stat.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for stdlib.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for string.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for memory.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for strings.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for inttypes.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for stdint.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5015: checking for unistd.h >configure:5015: mpicc -c -march=native -O2 -pipe conftest.c >&5 >configure:5015: $? = 0 >configure:5015: result: yes >configure:5044: checking for unistd.h >configure:5044: result: yes >configure:5044: checking mach-o/dyld.h usability >configure:5044: mpicc -c -march=native -O2 -pipe conftest.c >&5 >conftest.c:55:25: fatal error: mach-o/dyld.h: No such file or directory >compilation terminated. >configure:5044: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| #define INSTALLPREFIX "/usr" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define ENABLE_RELOCATABLE 1 >| #define HAVE_UNISTD_H 1 >| /* end confdefs.h. */ >| #include <stdio.h> >| #ifdef HAVE_SYS_TYPES_H >| # include <sys/types.h> >| #endif >| #ifdef HAVE_SYS_STAT_H >| # include <sys/stat.h> >| #endif >| #ifdef STDC_HEADERS >| # include <stdlib.h> >| # include <stddef.h> >| #else >| # ifdef HAVE_STDLIB_H >| # include <stdlib.h> >| # endif >| #endif >| #ifdef HAVE_STRING_H >| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H >| # include <memory.h> >| # endif >| # include <string.h> >| #endif >| #ifdef HAVE_STRINGS_H >| # include <strings.h> >| #endif >| #ifdef HAVE_INTTYPES_H >| # include <inttypes.h> >| #endif >| #ifdef HAVE_STDINT_H >| # include <stdint.h> >| #endif >| #ifdef HAVE_UNISTD_H >| # include <unistd.h> >| #endif >| #include <mach-o/dyld.h> >configure:5044: result: no >configure:5044: checking mach-o/dyld.h presence >configure:5044: mpicc -E conftest.c >conftest.c:22:25: fatal error: mach-o/dyld.h: No such file or directory >compilation terminated. >configure:5044: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| #define INSTALLPREFIX "/usr" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define ENABLE_RELOCATABLE 1 >| #define HAVE_UNISTD_H 1 >| /* end confdefs.h. */ >| #include <mach-o/dyld.h> >configure:5044: result: no >configure:5044: checking for mach-o/dyld.h >configure:5044: result: no >configure:5056: checking for _NSGetExecutablePath >configure:5056: mpicc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >/var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/temp/ccymzDER.o: In function `main': >conftest.c:(.text.startup+0x7): undefined reference to `_NSGetExecutablePath' >collect2: ld returned 1 exit status >configure:5056: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| #define INSTALLPREFIX "/usr" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define ENABLE_RELOCATABLE 1 >| #define HAVE_UNISTD_H 1 >| /* end confdefs.h. */ >| /* Define _NSGetExecutablePath to an innocuous variant, in case <limits.h> declares _NSGetExecutablePath. >| For example, HP-UX 11i <limits.h> declares gettimeofday. */ >| #define _NSGetExecutablePath innocuous__NSGetExecutablePath >| >| /* System header to define __stub macros and hopefully few prototypes, >| which can conflict with char _NSGetExecutablePath (); below. >| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since >| <limits.h> exists even on freestanding compilers. */ >| >| #ifdef __STDC__ >| # include <limits.h> >| #else >| # include <assert.h> >| #endif >| >| #undef _NSGetExecutablePath >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char _NSGetExecutablePath (); >| /* The GNU C library defines this for functions which it implements >| to always fail with ENOSYS. Some functions are actually named >| something starting with __ and the normal name is an alias. */ >| #if defined __stub__NSGetExecutablePath || defined __stub____NSGetExecutablePath >| choke me >| #endif >| >| int >| main () >| { >| return _NSGetExecutablePath (); >| ; >| return 0; >| } >configure:5056: result: no >configure:5125: checking for shared library run path origin >configure:5138: result: done >configure:5160: checking whether to enable maintainer-specific portions of Makefiles >configure:5169: result: no >configure:5185: checking whether build environment is sane >configure:5240: result: yes >configure:5279: checking for a thread-safe mkdir -p >configure:5318: result: /bin/mkdir -p >configure:5325: checking for gawk >configure:5341: found /usr/bin/gawk >configure:5352: result: gawk >configure:5363: checking whether make sets $(MAKE) >configure:5385: result: yes >configure:5415: checking for style of include used by make >configure:5443: result: GNU >configure:5535: checking dependency style of mpicc >configure:5646: result: none >configure:5788: checking how to run the C preprocessor >configure:5858: result: mpicc -E >configure:5878: mpicc -E conftest.c >configure:5878: $? = 0 >configure:5892: mpicc -E conftest.c >conftest.c:25:28: fatal error: ac_nonexistent.h: No such file or directory >compilation terminated. >configure:5892: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "Scilab" >| #define PACKAGE_TARNAME "scilab" >| #define PACKAGE_VERSION "5" >| #define PACKAGE_STRING "Scilab 5" >| #define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >| #define PACKAGE_URL "" >| #define INSTALLPREFIX "/usr" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define ENABLE_RELOCATABLE 1 >| #define HAVE_UNISTD_H 1 >| #define INSTALLPREFIX "/usr" >| #define PACKAGE "scilab" >| #define VERSION "5" >| /* end confdefs.h. */ >| #include <ac_nonexistent.h> >configure:5920: checking for grep that handles long lines and -e >configure:5978: result: /bin/grep >configure:6026: checking for x86_64-pc-linux-gnu-pkg-config >configure:6059: result: no >configure:6069: checking for pkg-config >configure:6087: found /usr/bin/pkg-config >configure:6099: result: /usr/bin/pkg-config >configure:6124: checking pkg-config is at least version 0.9.0 >configure:6127: result: yes >configure:6592: checking for x86_64-pc-linux-gnu-g77 >configure:6619: result: mpif77 >configure:6689: checking for Fortran 77 compiler version >configure:6698: mpif77 --version >&5 >GNU Fortran (Gentoo 4.6.3 p1.10, pie-0.5.2) 4.6.3 >Copyright (C) 2011 Free Software Foundation, Inc. > >GNU Fortran comes with NO WARRANTY, to the extent permitted by law. >You may redistribute copies of GNU Fortran >under the terms of the GNU General Public License. >For more information about these matters, see the file named COPYING > >configure:6709: $? = 0 >configure:6698: mpif77 -v >&5 >Using built-in specs. >COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3/x86_64-pc-linux-gnu-gfortran >COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.6.3/lto-wrapper >Target: x86_64-pc-linux-gnu >Configured with: /var/tmp/portage/sys-devel/gcc-4.6.3/work/gcc-4.6.3/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --enable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/python --enable-checking=release --enable-java-awt=gtk --enable-libstdcxx-time --enable-languages=c,c++,java,objc,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.6.3 p1.10, pie-0.5.2' >Thread model: posix >gcc version 4.6.3 (Gentoo 4.6.3 p1.10, pie-0.5.2) >configure:6709: $? = 0 >configure:6698: mpif77 -V >&5 >x86_64-pc-linux-gnu-gfortran: error: unrecognized option '-V' >x86_64-pc-linux-gnu-gfortran: fatal error: no input files >compilation terminated. >configure:6709: $? = 1 >configure:6698: mpif77 -qversion >&5 >x86_64-pc-linux-gnu-gfortran: error: unrecognized option '-qversion' >x86_64-pc-linux-gnu-gfortran: fatal error: no input files >compilation terminated. >configure:6709: $? = 1 >configure:6718: checking whether we are using the GNU Fortran 77 compiler >configure:6731: mpif77 -c -march=native -O2 -pipe conftest.F >&5 >configure:6731: $? = 0 >configure:6740: result: yes >configure:6746: checking whether mpif77 accepts -g >configure:6757: mpif77 -c -g conftest.f >&5 >configure:6757: $? = 0 >configure:6765: result: yes >configure:6804: checking if mpif77 is a fortran 90 compatible compiler >configure:6829: mpif77 -c -march=native -O2 -pipe conftest.f >&5 >configure:6829: $? = 0 >configure:6830: result: yes >configure:8110: checking size of int >configure:8115: mpicc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >configure:8115: $? = 0 >configure:8115: ./conftest >configure:8115: $? = 0 >configure:8129: result: 4 >configure:8143: checking size of long >configure:8148: mpicc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c >&5 >configure:8148: $? = 0 >configure:8148: ./conftest >configure:8148: $? = 0 >configure:8162: result: 8 >configure:8286: checking for C++ compiler version >configure:8295: mpicxx --version >&5 >x86_64-pc-linux-gnu-g++ (Gentoo 4.6.3 p1.10, pie-0.5.2) 4.6.3 >Copyright (C) 2011 Free Software Foundation, Inc. >This is free software; see the source for copying conditions. There is NO >warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. > >configure:8306: $? = 0 >configure:8295: mpicxx -v >&5 >Using built-in specs. >COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3/x86_64-pc-linux-gnu-g++ >COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.6.3/lto-wrapper >Target: x86_64-pc-linux-gnu >Configured with: /var/tmp/portage/sys-devel/gcc-4.6.3/work/gcc-4.6.3/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.6.3 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.6.3/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --enable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.6.3/python --enable-checking=release --enable-java-awt=gtk --enable-libstdcxx-time --enable-languages=c,c++,java,objc,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.6.3 p1.10, pie-0.5.2' >Thread model: posix >gcc version 4.6.3 (Gentoo 4.6.3 p1.10, pie-0.5.2) >configure:8306: $? = 0 >configure:8295: mpicxx -V >&5 >x86_64-pc-linux-gnu-g++: error: unrecognized option '-V' >x86_64-pc-linux-gnu-g++: fatal error: no input files >compilation terminated. >configure:8306: $? = 1 >configure:8295: mpicxx -qversion >&5 >x86_64-pc-linux-gnu-g++: error: unrecognized option '-qversion' >x86_64-pc-linux-gnu-g++: fatal error: no input files >compilation terminated. >configure:8306: $? = 1 >configure:8310: checking whether we are using the GNU C++ compiler >configure:8329: mpicxx -c -O2 -pipe conftest.cpp >&5 >configure:8329: $? = 0 >configure:8338: result: yes >configure:8347: checking whether mpicxx accepts -g >configure:8367: mpicxx -c -g conftest.cpp >&5 >configure:8367: $? = 0 >configure:8408: result: yes >configure:8433: checking dependency style of mpicxx >configure:8544: result: none >configure:8613: checking whether mpicc and cc understand -c and -o together >configure:8644: mpicc -c conftest.c -o conftest2.o >&5 >configure:8648: $? = 0 >configure:8654: mpicc -c conftest.c -o conftest2.o >&5 >configure:8658: $? = 0 >configure:8669: cc -c conftest.c >&5 >configure:8673: $? = 0 >configure:8681: cc -c conftest.c -o conftest2.o >&5 >configure:8685: $? = 0 >configure:8691: cc -c conftest.c -o conftest2.o >&5 >configure:8695: $? = 0 >configure:8713: result: yes >configure:8742: checking whether mpif77 understands -c and -o together >configure:8760: mpif77 -march=native -O2 -pipe -c conftest.f -o conftest2.o >&5 >configure:8764: $? = 0 >configure:8771: mpif77 -march=native -O2 -pipe -c conftest.f -o conftest2.o >&5 >configure:8775: $? = 0 >configure:8783: result: yes >configure:9382: checking for nm >configure:9398: found /usr/bin/nm >configure:9409: result: nm >configure:9424: checking for leading underscores with Fortran (name-mangling scheme) >configure:9468: result: no >configure:9470: checking for trailing underscores with Fortran (name-mangling scheme) >configure:9472: result: yes >configure:9479: checking use of the sharpsign in CPP >configure:9496: mpicc -c -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ conftest.c >&5 >configure:9496: $? = 0 >configure:9497: result: yes >configure:9518: result: Define C2F with Trailing Underscore and Sharp Sign >configure:9602: checking hdf5.h usability >configure:9602: mpicc -c -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ conftest.c >&5 >configure:9602: $? = 0 >configure:9602: result: yes >configure:9602: checking hdf5.h presence >configure:9602: mpicc -E conftest.c >configure:9602: $? = 0 >configure:9602: result: yes >configure:9602: checking for hdf5.h >configure:9602: result: yes >configure:9670: checking for H5Fopen in -lhdf5 >configure:9695: mpicc -o conftest -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c -lhdf5 -lhdf5 >&5 >configure:9695: $? = 0 >configure:9704: result: yes >configure:9773: checking for clock_gettime in -lrt >configure:9798: mpicc -o conftest -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c -lrt >&5 >configure:9798: $? = 0 >configure:9807: result: yes >configure:9836: checking for ocamlc >configure:9852: found /usr/bin/ocamlc >configure:9864: result: ocamlc >configure:9878: checking for ocamlopt >configure:9894: found /usr/bin/ocamlopt >configure:9906: result: ocamlopt >configure:9920: checking for ocamldep >configure:9936: found /usr/bin/ocamldep >configure:9948: result: ocamldep >configure:9962: checking for ocamlyacc >configure:9978: found /usr/bin/ocamlyacc >configure:9990: result: ocamlyacc >configure:10004: checking for ocamllex >configure:10020: found /usr/bin/ocamllex >configure:10032: result: ocamllex >configure:10131: checking JAVA_HOME variable >configure:10136: result: JAVA_HOME variable found, use it as JVM root directory >configure:10284: checking for zip or jar files to include on CLASSPATH >Using CLASSPATH= >configure:10311: result: >configure:10320: checking to see if the java compiler works >/usr/lib64/icedtea7/bin/javac -g conftest.java >yes >configure:10365: result: yes >Using JAVAC=/usr/lib64/icedtea7/bin/javac >Java found in /usr/lib64/icedtea7 >configure:10384: checking type of jvm >/usr/lib64/icedtea7/bin/javac -g conftest.java >conftest.java:2: error: package gnu.java.io does not exist >import gnu.java.io.EncodingManager; > ^ >1 error >configure: failed program was: >// #line 10390 "configure" >import gnu.java.io.EncodingManager; > >public class conftest { > public static void main(String[] argv) { > > } >} >configure: CLASSPATH was >configure:10436: result: jdk >configure:10447: checking java API version >/usr/lib64/icedtea7/bin/javac -g conftest.java >yes >/usr/lib64/icedtea7/bin/javac -g conftest.java >yes >/usr/lib64/icedtea7/bin/javac -g conftest.java >yes >configure:10589: result: 1.6 >Using the following JNI include flags -I/usr/lib64/icedtea7/include -I/usr/lib64/icedtea7/include/linux >configure:10650: checking if jni.h can be included >configure:10677: mpicc -c -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ -I/usr/lib64/icedtea7/include -I/usr/lib64/icedtea7/include/linux conftest.c >&5 >configure:10677: $? = 0 >configure:10692: result: yes >Looking for JNI libs with x86_64 as machine hardware name >Looking for /usr/lib64/icedtea7/jre/lib/x86_64/libjava.so >Looking for /usr/lib64/icedtea7/jre/lib/amd64/libjava.so >Found /usr/lib64/icedtea7/jre/lib/amd64/libjava.so >Using the following JNI library flags -L/usr/lib64/icedtea7/jre/lib/amd64 -ljava -lverify -L/usr/lib64/icedtea7/jre/lib/amd64/server -ljvm >Using the following runtime library path /usr/lib64/icedtea7/jre/lib/amd64:/usr/lib64/icedtea7/jre/lib/amd64/server >Using LD_PRELOAD= >Using LD_BIND_NOW= >configure:10940: checking to see if we can link a JNI application >configure:10969: mpicc -o conftest -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ -I/usr/lib64/icedtea7/include -I/usr/lib64/icedtea7/include/linux -Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed conftest.c -L/usr/lib64/icedtea7/jre/lib/amd64 -ljava -lverify -L/usr/lib64/icedtea7/jre/lib/amd64/server -ljvm >&5 >configure:10969: $? = 0 >configure:10986: result: yes >configure:11054: checking for zip or jar files to include on CLASSPATH >Using CLASSPATH= >configure:11081: result: >configure:11141: checking for java >configure:11171: result: /usr/lib64/icedtea7/bin/java >configure:11236: checking for java_g >configure:11269: result: no >configure:11331: checking for javah >configure:11349: found /usr/lib64/icedtea7/bin/javah >configure:11361: result: /usr/lib64/icedtea7/bin/javah >configure:11425: checking for jar >configure:11443: found /usr/lib64/icedtea7/bin/jar >configure:11455: result: /usr/lib64/icedtea7/bin/jar >configure:11519: checking for javadoc >configure:11537: found /usr/lib64/icedtea7/bin/javadoc >configure:11549: result: /usr/lib64/icedtea7/bin/javadoc >configure:11614: checking for jdb >configure:11632: found /usr/lib64/icedtea7/bin/jdb >configure:11644: result: /usr/lib64/icedtea7/bin/jdb >configure:11728: checking for ant >configure:11746: found /usr/bin/ant >configure:11758: result: /usr/bin/ant >configure:11887: checking jgraphx >/usr/lib64/icedtea7/bin/javac -g conftest.java >yes >configure:11923: result: /usr/share/jgraphx/lib//jgraphx.jar >configure:11993: checking minimal version (1.4.1.0) of jgraphx >/usr/lib64/icedtea7/bin/javac -g conftest.java >/usr/lib64/icedtea7/bin/java conftest >yes >configure:12103: checking minimal version (1.4.1.0) of jgraphx >/usr/lib64/icedtea7/bin/javac -g conftest.java >/usr/lib64/icedtea7/bin/java conftest >yes >configure:12219: checking jhdf5 >/usr/lib64/icedtea7/bin/javac -g conftest.java >yes >configure:12255: result: /usr/share/hdf-java/lib//jhdf5.jar >configure:12332: checking for h5JNIFatalError in -ljhdf5 >configure:12357: mpicc -o conftest -march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/ -L/usr/lib64/hdf-java -L/usr/lib64/jni/ -L./bin/ -L./thirdparty/ -lpthread -lhdf5 conftest.c -ljhdf5 >&5 >configure:12357: $? = 0 >configure:12366: result: yes >configure:12380: checking minimal version (1.8.4) of hdf5 >/usr/lib64/icedtea7/bin/javac -g conftest.java >/usr/lib64/icedtea7/bin/java conftest >configure: failed program was: >// #line 12387 "configure" >import ncsa.hdf.hdf5lib.H5; > >public class conftest { > public static void main(String[] argv) { > String minVersion="1.8.4"; > int[] vers = new int[3]; > try { H5.H5get_libversion(vers); } > catch (Throwable ex) {System.exit(-1);} > String ver = vers[0] + "."+ vers[1] +"."+vers[2]; > > System.out.println(ver); > if (minVersion.compareTo(ver) > 0) { > System.exit(-1); > } > > } >} >configure: CLASSPATH was /usr/share/hdf-java/lib//jhdf5.jar:/usr/share/hdf-java/lib//jhdf5.jar:/usr/share/jgraphx/lib//jgraphx.jar: >configure:12426: error: Wrong version of hdf5. Expected at least 1.8.4. Found 1.8.10 > >## ---------------- ## >## Cache variables. ## >## ---------------- ## > >ac_cv_build=x86_64-pc-linux-gnu >ac_cv_c_compiler_gnu=yes >ac_cv_cxx_compiler_gnu=yes >ac_cv_env_CCC_set= >ac_cv_env_CCC_value= >ac_cv_env_CC_set=set >ac_cv_env_CC_value=mpicc >ac_cv_env_CFLAGS_set=set >ac_cv_env_CFLAGS_value='-march=native -O2 -pipe' >ac_cv_env_CPPFLAGS_set= >ac_cv_env_CPPFLAGS_value= >ac_cv_env_CPP_set= >ac_cv_env_CPP_value= >ac_cv_env_CXXCPP_set= >ac_cv_env_CXXCPP_value= >ac_cv_env_CXXFLAGS_set=set >ac_cv_env_CXXFLAGS_value='-O2 -pipe' >ac_cv_env_CXX_set=set >ac_cv_env_CXX_value=mpicxx >ac_cv_env_F77_set=set >ac_cv_env_F77_value=mpif77 >ac_cv_env_FFLAGS_set=set >ac_cv_env_FFLAGS_value='-march=native -O2 -pipe' >ac_cv_env_LDFLAGS_set=set >ac_cv_env_LDFLAGS_value='-Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed' >ac_cv_env_LIBS_set= >ac_cv_env_LIBS_value= >ac_cv_env_MATIO_CFLAGS_set= >ac_cv_env_MATIO_CFLAGS_value= >ac_cv_env_MATIO_LIBS_set= >ac_cv_env_MATIO_LIBS_value= >ac_cv_env_PCRE_CFLAGS_set= >ac_cv_env_PCRE_CFLAGS_value= >ac_cv_env_PCRE_LIBS_set= >ac_cv_env_PCRE_LIBS_value= >ac_cv_env_PKG_CONFIG_set= >ac_cv_env_PKG_CONFIG_value= >ac_cv_env_XMKMF_set= >ac_cv_env_XMKMF_value= >ac_cv_env_build_alias_set=set >ac_cv_env_build_alias_value=x86_64-pc-linux-gnu >ac_cv_env_host_alias_set=set >ac_cv_env_host_alias_value=x86_64-pc-linux-gnu >ac_cv_env_target_alias_set= >ac_cv_env_target_alias_value= >ac_cv_f77_compiler_gnu=yes >ac_cv_func__NSGetExecutablePath=no >ac_cv_header_hdf5_h=yes >ac_cv_header_inttypes_h=yes >ac_cv_header_mach_o_dyld_h=no >ac_cv_header_memory_h=yes >ac_cv_header_stdc=yes >ac_cv_header_stdint_h=yes >ac_cv_header_stdlib_h=yes >ac_cv_header_string_h=yes >ac_cv_header_strings_h=yes >ac_cv_header_sys_stat_h=yes >ac_cv_header_sys_types_h=yes >ac_cv_header_unistd_h=yes >ac_cv_host=x86_64-pc-linux-gnu >ac_cv_java_jvm_jni_working=yes >ac_cv_java_jvm_working_jni_link=yes >ac_cv_lib_hdf5_H5Fopen=yes >ac_cv_lib_jhdf5_h5JNIFatalError=yes >ac_cv_lib_rt_clock_gettime=yes >ac_cv_objext=o >ac_cv_path_ANT=/usr/bin/ant >ac_cv_path_EGREP='/bin/grep -E' >ac_cv_path_GREP=/bin/grep >ac_cv_path_JAR=/usr/lib64/icedtea7/bin/jar >ac_cv_path_JAVA=/usr/lib64/icedtea7/bin/java >ac_cv_path_JAVADOC=/usr/lib64/icedtea7/bin/javadoc >ac_cv_path_JAVAH=/usr/lib64/icedtea7/bin/javah >ac_cv_path_JDB=/usr/lib64/icedtea7/bin/jdb >ac_cv_path_ac_pt_PKG_CONFIG=/usr/bin/pkg-config >ac_cv_path_install='/usr/bin/install -c' >ac_cv_path_mkdir=/bin/mkdir >ac_cv_prog_AWK=gawk >ac_cv_prog_CC=mpicc >ac_cv_prog_CPP='mpicc -E' >ac_cv_prog_F77=mpif77 >ac_cv_prog_NM=nm >ac_cv_prog_OCAMLC=ocamlc >ac_cv_prog_OCAMLDEP=ocamldep >ac_cv_prog_OCAMLLEX=ocamllex >ac_cv_prog_OCAMLOPT=ocamlopt >ac_cv_prog_OCAMLYACC=ocamlyacc >ac_cv_prog_cc_c89= >ac_cv_prog_cc_g=yes >ac_cv_prog_cc_mpicc_c_o=yes >ac_cv_prog_cxx_g=yes >ac_cv_prog_f77_c_o=yes >ac_cv_prog_f77_g=yes >ac_cv_prog_make_make_set=yes >ac_cv_sizeof_int=4 >ac_cv_sizeof_long=8 >ac_cv_sys_file_offset_bits=no >ac_cv_sys_largefile_CC=no >acl_cv_hardcode_direct=no >acl_cv_hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir' >acl_cv_hardcode_libdir_separator= >acl_cv_hardcode_minus_L=no >acl_cv_libext=a >acl_cv_libpath=LD_LIBRARY_PATH >acl_cv_path_LD=/usr/x86_64-pc-linux-gnu/bin/ld >acl_cv_prog_gnu_ld=yes >acl_cv_rpath=done >acl_cv_shlibext=so >acl_cv_shlibpath_var=LD_LIBRARY_PATH >acl_cv_wl=-Wl, >am_cv_CC_dependencies_compiler_type=none >am_cv_CXX_dependencies_compiler_type=none > >## ----------------- ## >## Output variables. ## >## ----------------- ## > >ACLOCAL='${SHELL} /var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config/missing --run aclocal-1.12' >ALL_LINGUAS=' de_DE ru_RU' >AMDEPBACKSLASH='' >AMDEP_FALSE='' >AMDEP_TRUE='#' >AMTAR='$${TAR-tar}' >ANT='/usr/bin/ant' >ANTLR='' >AR='' >AUTOCONF='${SHELL} /var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config/missing --run autoconf' >AUTOHEADER='${SHELL} /var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config/missing --run autoheader' >AUTOMAKE='${SHELL} /var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config/missing --run automake-1.12' >AVALON_FRAMEWORK='' >AWK='gawk' >BATIK='' >BLAS_LIBS='-lf77blas -lm -latlas ' >BSH='' >BUILD_HELP_FALSE='' >BUILD_HELP_TRUE='' >CC='mpicc' >CCDEPMODE='depmode=none' >CFLAGS='-march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/' >CHECKSTYLE='' >CODE_COVERAGE_FALSE='' >CODE_COVERAGE_TRUE='#' >COMMONS_BEANUTILS='' >COMMONS_IO='' >COMMONS_LOGGING='' >COMPILATION_TESTS_FALSE='' >COMPILATION_TESTS_TRUE='' >CPP='mpicc -E' >CPPFLAGS='' >CXX='mpicxx' >CXXCPP='' >CXXDEPMODE='depmode=none' >CXXFLAGS='-O2 -pipe -D_LARGEFILE64_SOURCE -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/' >CYGPATH_W='echo' >DEFS='' >DEMOTOOLS_ENABLE='' >DEPDIR='.deps' >DLLTOOL='' >DOCBOOK_ROOT='' >DSYMUTIL='' >DUMPBIN='' >ECHO_C='' >ECHO_N='-n' >ECHO_T='' >EGREP='/bin/grep -E' >ENABLE_STATIC_FALSE='' >ENABLE_STATIC_TRUE='' >EXEEXT='' >F77='mpif77' >FFLAGS='-march=native -O2 -pipe -D_LARGEFILE64_SOURCE -DNDEBUG -m64 -fPIC -I$(top_srcdir)/modules/core/includes/' >FFTW3_LIB='' >FFTW_ENABLE='' >FFTW_FALSE='' >FFTW_TRUE='' >FGREP='' >FLEXDOCK='' >FLIBS='' >FOP='' >GENERATE_LOCALIZATION_FILES_FALSE='' >GENERATE_LOCALIZATION_FILES_TRUE='' >GENHTML='' >GIWS_BIN='' >GIWS_FALSE='' >GIWS_TRUE='' >GLUEGEN_RT='' >GMSGFMT='' >GMSGFMT_015='' >GRAPHICS_ENABLE='' >GREP='/bin/grep' >GUI_ENABLE='' >GUI_FALSE='' >GUI_TRUE='' >HDF5_CFLAGS='' >HDF5_ENABLE='yes' >HDF5_FALSE='#' >HDF5_LIBS='-lhdf5' >HDF5_TRUE='' >HELP_ENABLE='' >INSTALL_DATA='${INSTALL} -m 644' >INSTALL_HELP_XML_FALSE='' >INSTALL_HELP_XML_TRUE='' >INSTALL_PROGRAM='${INSTALL}' >INSTALL_SCRIPT='${INSTALL}' >INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' >INTLLIBS='' >INTL_MACOSX_LIBS='' >IS_64_BITS_CPU_FALSE='#' >IS_64_BITS_CPU_TRUE='' >IS_HPUX_FALSE='' >IS_HPUX_TRUE='#' >IS_MACOSX_FALSE='' >IS_MACOSX_TRUE='#' >IS_MIPS_SGI_IRIX_FALSE='' >IS_MIPS_SGI_IRIX_TRUE='#' >IS_SOLARIS_FALSE='' >IS_SOLARIS_TRUE='#' >IS_SPARC_FALSE='' >IS_SPARC_TRUE='#' >JAR='/usr/lib64/icedtea7/bin/jar' >JAVA='/usr/lib64/icedtea7/bin/java' >JAVAC='/usr/lib64/icedtea7/bin/javac' >JAVAC_DEBUG='' >JAVADOC='/usr/lib64/icedtea7/bin/javadoc' >JAVAH='/usr/lib64/icedtea7/bin/javah' >JAVASCI_ENABLE='' >JAVASCI_FALSE='' >JAVASCI_TRUE='' >JAVA_ENABLE='' >JAVA_G='/usr/lib64/icedtea7/bin/java' >JAVA_HOME='/usr/lib64/icedtea7' >JAVA_JNI_INCLUDE='-I/usr/lib64/icedtea7/include -I/usr/lib64/icedtea7/include/linux' >JAVA_JNI_LIBS='-L/usr/lib64/icedtea7/jre/lib/amd64 -ljava -lverify -L/usr/lib64/icedtea7/jre/lib/amd64/server -ljvm' >JDB='/usr/lib64/icedtea7/bin/jdb' >JEUCLID_CORE='' >JGRAPHX='/usr/share/jgraphx/lib//jgraphx.jar' >JHALL='' >JHDF5='/usr/share/hdf-java/lib//jhdf5.jar' >JLATEXMATH='' >JLATEXMATH_FOP='' >JOGL='' >JROSETTA_API='' >JROSETTA_ENGINE='' >JUNIT='' >LAPACK_LIBS='-latllapack -lf77blas -latlcblas -lm -latlas ' >LCOV='' >LD='/usr/x86_64-pc-linux-gnu/bin/ld' >LDFLAGS='-Wl,-O1 -Wl,--as-needed -Wl,--no-as-needed' >LIBICONV='' >LIBINTL='' >LIBM='' >LIBOBJS=' relocatable.o' >LIBS='' >LIBTOOL='' >LIPO='' >LN_S='ln -s' >LOOKS='' >LTLIBICONV='' >LTLIBINTL='' >LTLIBOBJS='' >MAINT='#' >MAINTAINER_MODE_FALSE='' >MAINTAINER_MODE_TRUE='#' >MAKEINFO='${SHELL} /var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config/missing --run makeinfo' >MANIFEST_TOOL='' >MATIO_CFLAGS='' >MATIO_ENABLE='' >MATIO_FALSE='' >MATIO_LIBS='' >MATIO_TRUE='' >MKDIR_P='/bin/mkdir -p' >MSGCAT='' >MSGFMT='' >MSGFMT_015='' >MSGMERGE='' >NEED_JAVA_FALSE='' >NEED_JAVA_TRUE='' >NM='nm' >NMEDIT='' >OBJDUMP='' >OBJEXT='o' >OCAMLC='ocamlc' >OCAMLDEP='ocamldep' >OCAMLLEX='ocamllex' >OCAMLOPT='ocamlopt' >OCAMLYACC='ocamlyacc' >OCAML_FALSE='#' >OCAML_TRUE='' >OPENMP_CFLAGS='' >OPENMP_CXXFLAGS='' >OPENMP_ENABLE='' >OPENMP_FALSE='' >OPENMP_LIBS='' >OPENMP_TRUE='' >OTOOL64='' >OTOOL='' >PACKAGE='scilab' >PACKAGE_BUGREPORT='http://bugzilla.scilab.org/' >PACKAGE_NAME='Scilab' >PACKAGE_STRING='Scilab 5' >PACKAGE_TARNAME='scilab' >PACKAGE_URL='' >PACKAGE_VERSION='5' >PATH_SEPARATOR=':' >PCRE_CFLAGS='' >PCRE_CONFIG='' >PCRE_LIBS='' >PCRE_VERSION='' >PKG_CONFIG='/usr/bin/pkg-config' >POSUB='' >POW_LIB='' >PVMGETARCH='' >PVM_ARCH='LINUX' >PVM_ENABLE='' >PVM_FALSE='' >PVM_INCLUDE='' >PVM_LIB='' >PVM_TRUE='' >PYTHON='' >QDOX='' >RANLIB='' >RELOCATABLE='yes' >RELOCATABLE_VIA_LD_FALSE='#' >RELOCATABLE_VIA_LD_TRUE='' >RT_LIB='-lrt' >SAXON='' >SCILAB_BINARY_VERSION='5.3.3' >SCILAB_LIBRARY_VERSION='5:3:3' >SCILAB_VERSION_MAINTENANCE='3' >SCILAB_VERSION_MAJOR='5' >SCILAB_VERSION_MINOR='3' >SED='' >SET_MAKE='' >SET_RELOCATABLE='RELOCATABLE_LDFLAGS = "$(top_builddir)/config/reloc-ldflags" "$(host)" "$(RELOCATABLE_LIBRARY_PATH)"' >SHELL='/bin/sh' >SKINLF='' >SPLINT='' >STRIP='' >SWIG_BIN='' >SWIG_FALSE='' >SWIG_JAVA='' >SWIG_RUNTIME_LIBS_DIR='' >SWIG_TRUE='' >TCLTK_FALSE='' >TCLTK_LIBS='' >TCLTK_TRUE='' >TCL_INC_PATH='' >TESTNG='' >TK_INC_PATH='' >UMFPACK_ENABLE='' >UMFPACK_FALSE='' >UMFPACK_LIB='' >UMFPACK_TRUE='' >USE_DYNAMIC_STACK_FALSE='#' >USE_DYNAMIC_STACK_TRUE='' >USE_NLS='' >VERSION='5' >WITH_OCAML='' >WITH_TKSCI='' >XCOS_ENABLE='yes' >XCOS_FALSE='#' >XCOS_TRUE='' >XGETTEXT='' >XGETTEXT_015='' >XMKMF='' >XMLGRAPHICS_COMMONS='' >XML_APIS_EXT='' >XML_CONFIG='' >XML_FLAGS='' >XML_LIBS='' >XML_VERSION='' >X_CFLAGS='' >X_EXTRA_LIBS='' >X_LIBS='' >X_PRE_LIBS='' >ac_ct_AR='' >ac_ct_CC='' >ac_ct_CXX='' >ac_ct_DUMPBIN='' >ac_ct_F77='' >am__EXEEXT_FALSE='' >am__EXEEXT_TRUE='' >am__fastdepCC_FALSE='' >am__fastdepCC_TRUE='#' >am__fastdepCXX_FALSE='' >am__fastdepCXX_TRUE='#' >am__include='include' >am__isrc='' >am__leading_dot='.' >am__nodep='' >am__quote='' >am__tar='$${TAR-tar} chof - "$$tardir"' >am__untar='$${TAR-tar} xf -' >bindir='${exec_prefix}/bin' >build='x86_64-pc-linux-gnu' >build_alias='x86_64-pc-linux-gnu' >build_cpu='x86_64' >build_os='linux-gnu' >build_vendor='pc' >cxx_present='' >datadir='/usr/share' >datarootdir='${prefix}/share' >docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' >dvidir='${docdir}' >exec_prefix='NONE' >host='x86_64-pc-linux-gnu' >host_alias='x86_64-pc-linux-gnu' >host_cpu='x86_64' >host_os='linux-gnu' >host_vendor='pc' >htmldir='${docdir}' >includedir='${prefix}/include' >infodir='/usr/share/info' >install_sh='${SHELL} /var/tmp/portage/sci-mathematics/scilab-5.3.3-r1/work/scilab-5.3.3/config/install-sh' >libdir='/usr/lib64' >libexecdir='${exec_prefix}/libexec' >localedir='${datarootdir}/locale' >localstatedir='/var/lib' >mandir='/usr/share/man' >mkdir_p='$(MKDIR_P)' >oldincludedir='/usr/include' >pdfdir='${docdir}' >prefix='/usr' >program_transform_name='s,x,x,' >psdir='${docdir}' >sbindir='${exec_prefix}/sbin' >sharedstatedir='${prefix}/com' >sysconfdir='/etc' >target_alias='' > >## ----------- ## >## confdefs.h. ## >## ----------- ## > >/* confdefs.h */ >#define PACKAGE_NAME "Scilab" >#define PACKAGE_TARNAME "scilab" >#define PACKAGE_VERSION "5" >#define PACKAGE_STRING "Scilab 5" >#define PACKAGE_BUGREPORT "http://bugzilla.scilab.org/" >#define PACKAGE_URL "" >#define INSTALLPREFIX "/usr" >#define STDC_HEADERS 1 >#define HAVE_SYS_TYPES_H 1 >#define HAVE_SYS_STAT_H 1 >#define HAVE_STDLIB_H 1 >#define HAVE_STRING_H 1 >#define HAVE_MEMORY_H 1 >#define HAVE_STRINGS_H 1 >#define HAVE_INTTYPES_H 1 >#define HAVE_STDINT_H 1 >#define HAVE_UNISTD_H 1 >#define ENABLE_RELOCATABLE 1 >#define HAVE_UNISTD_H 1 >#define INSTALLPREFIX "/usr" >#define PACKAGE "scilab" >#define VERSION "5" >#define G95_FORTRAN /**/ >#define SIZEOF_INT 4 >#define SIZEOF_LONG 8 >#define USE_DYNAMIC_STACK /**/ >#define WTU /**/ >#define CNAME(name1,name2) name1##name2 >#define C2F(name) name##_ >#define F2C(name) name##_ >#define HAVE_LIBHDF5 1 >#define WITH_HDF5 /**/ >#define WITH_XCOS /**/ >#define HAVE_CLOCK_GETTIME 1 >#define WITH_OCAML /**/ > >configure: exit 1
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bug 452672
: 335914