build.log

build.log (text/plain), 18.83 KB, created by Dennis Schridde on 2013-01-09 15:07:07 UTC

[32;01m * [39;49;00mPackage:    sys-cluster/mpich2-1.2.1_p1-r1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail] [e-mail]
[32;01m * [39;49;00mUSE:        cxx elibc_glibc fortran kernel_linux mpi-threads ppc64 userland_GNU
[32;01m * [39;49;00mFEATURES:   preserve-libs sandbox userpriv usersandbox
 [32;01m*[0m Using following Fortran compiler:
 [32;01m*[0m   F77: powerpc64-unknown-linux-gnu-gfortran
 [32;01m*[0m   FC:  powerpc64-unknown-linux-gnu-gfortran
 [33;01m*[0m mpi-threads requires threads, assuming that's what you want
>>> Unpacking source...
>>> Unpacking mpich2-1.2.1p1.tar.gz to /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work
>>> Source unpacked in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work
>>> Preparing source in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1 ...
 [32;01m*[0m Applying 0001-MPD_CONF_FILE-should-be-readable.patch ...
[A[137C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying 0002-mpd_conf_file-search-order.patch ...
[A[137C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying 0003-Fix-pkgconfig-for-mpich2-ch3-v1.2.1.patch ...
[A[137C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying mpich2-1.2.1-fix-missing-libs.patch ...
[A[137C [34;01m[ [32;01mok[34;01m ][0m
>>> Source prepared.
>>> Configuring source in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1 ...
 * econf: updating mpich2-1.2.1p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/pm/hydra/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/pm/hydra/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/mpi/romio/confdb/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/mpi/romio/confdb/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_sample/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_sample/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_rlog/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_rlog/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/src/mpe2/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/src/mpe2/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating mpich2-1.2.1p1/confdb/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating mpich2-1.2.1p1/confdb/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=powerpc64-unknown-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --enable-sharedlibs=gcc --with-thread-package=pthreads --enable-threads=default --sysconfdir=/etc/mpich2 --docdir=/usr/share/doc/mpich2-1.2.1_p1-r1 --with-pm=mpd:hydra --disable-mpe --disable-romio --enable-cxx
configure: loading site script /usr/share/config.site
configure: loading site script /usr/share/crossdev/include/site/linux
configure: loading site script /usr/share/crossdev/include/site/linux-gnu
Configuring MPICH2 version 1.2.1p1 with  '--prefix=/usr' '--build=x86_64-pc-linux-gnu' '--host=powerpc64-unknown-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--libdir=/usr/lib64' '--enable-sharedlibs=gcc' '--with-thread-package=pthreads' '--enable-threads=default' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.2.1_p1-r1' '--with-pm=mpd:hydra' '--disable-mpe' '--disable-romio' '--enable-cxx' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=powerpc64-unknown-linux-gnu' 'CC=/mnt/ppc64/etc/crossdev/gcc' 'CFLAGS=-pipe -O2 -mcpu=cell -mabi=altivec -mgen-cell-microcode' 'LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu' 'F77=powerpc64-unknown-linux-gnu-gfortran' 'FFLAGS=-O2 -pipe' 'CXX=/mnt/ppc64/etc/crossdev/g++' 'CXXFLAGS=-pipe -O2 -mcpu=cell -mabi=altivec -mgen-cell-microcode'
Running on system: Linux navier 2.6.18-308.16.1.el5 #1 SMP Tue Oct 2 22:01:43 EDT 2012 x86_64 Quad-Core AMD Opteron(tm) Processor 2352 AuthenticAMD GNU/Linux
Executing mpich2prereq in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/mpid/ch3 with 
Executing mpich2prereq in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis
sourcing /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/pm/mpd/mpich2prereq
sourcing /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/pm/hydra/mpich2prereq
sourcing /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/pm/mpd/setup_pm
checking for powerpc64-unknown-linux-gnu-gcc... /mnt/ppc64/etc/crossdev/gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... yes
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /mnt/ppc64/etc/crossdev/gcc accepts -g... yes
checking for /mnt/ppc64/etc/crossdev/gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... /mnt/ppc64/etc/crossdev/gcc -E
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... 
checking whether the compiler sets __FUNCTION__... 
checking whether C compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for type of weak symbol alias support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute ((weak_import)) allowed... yes
checking for multiple weak symbol support... yes
checking for powerpc64-unknown-linux-gnu-g77... powerpc64-unknown-linux-gnu-gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether powerpc64-unknown-linux-gnu-gfortran accepts -g... yes
checking whether Fortran 77 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking how to get verbose linking output from powerpc64-unknown-linux-gnu-gfortran... -v
checking for Fortran 77 libraries of powerpc64-unknown-linux-gnu-gfortran...  -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/usr/lib/../lib64 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/usr/lib -lgfortran -lm
checking whether powerpc64-unknown-linux-gnu-gfortran accepts the FLIBS found by autoconf... yes
checking whether C can link with  -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/usr/lib/../lib64 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/usr/lib -lgfortran -lm... no
checking for which libraries can be used... 
checking for linker for Fortran main programs... Use Fortran to link programs
checking whether Fortran 77 and C objects are compatible... yes
checking for Fortran 77 name mangling... lower underscore
checking what libraries are needed to link Fortran programs with C routines that use stdio... none
checking whether Fortran init will work with C... yes
checking for powerpc64-unknown-linux-gnu-f90... no
checking for powerpc64-unknown-linux-gnu-xlf90... no
checking for powerpc64-unknown-linux-gnu-pgf90... no
checking for powerpc64-unknown-linux-gnu-ifort... no
checking for powerpc64-unknown-linux-gnu-epcf90... no
checking for powerpc64-unknown-linux-gnu-f95... no
checking for powerpc64-unknown-linux-gnu-fort... no
checking for powerpc64-unknown-linux-gnu-xlf95... no
checking for powerpc64-unknown-linux-gnu-lf95... no
checking for powerpc64-unknown-linux-gnu-pathf95... no
checking for powerpc64-unknown-linux-gnu-pathf90... no
checking for powerpc64-unknown-linux-gnu-g95... no
checking for powerpc64-unknown-linux-gnu-gfortran... powerpc64-unknown-linux-gnu-gfortran
checking that f works as the extension for Fortran 90 program... yes
checking whether we are using the GNU Fortran 90 compiler... yes
checking whether powerpc64-unknown-linux-gnu-gfortran accepts -g... yes
checking for extension for Fortran 90 programs... f90
checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran  -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) works... yes
checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran  -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) is a cross-compiler... yes
checking whether Fortran 90 works with Fortran 77... yes
checking whether Fortran accepts ! for comments... yes
checking for include directory flag for Fortran... -I
checking for Fortran 77 flag for library directories... -L
checking for which Fortran libraries are needed to link C with Fortran... none
checking whether powerpc64-unknown-linux-gnu-gfortran allows -shared -fpic... yes
checking whether Fortran compiler processes .F files with C preprocessor... yes
checking for powerpc64-unknown-linux-gnu-f90... (cached) powerpc64-unknown-linux-gnu-gfortran
checking that f works as the extension for Fortran 90 program... yes
checking whether we are using the GNU Fortran 90 compiler... (cached) yes
checking whether powerpc64-unknown-linux-gnu-gfortran accepts -g... (cached) yes
checking for extension for Fortran 90 programs... f90
checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran  -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) works... yes
checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran  -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) is a cross-compiler... yes
checking for Fortran 90 module extension... mod
checking for Fortran 90 module include flag... -I
checking whether Fortran 90 accepts f90 suffix... yes
checking whether Fortran 90 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes
checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none
checking for f90 compiler vendor... gnu
checking for how to build shared libraries for Fortran 90... Compile with powerpc64-unknown-linux-gnu-gfortran -shared -fpic and link using path argument -Wl,-rpath -Wl,
checking whether we are using the GNU C++ compiler... yes
checking whether /mnt/ppc64/etc/crossdev/g++ accepts -g... yes
checking whether the C++ compiler /mnt/ppc64/etc/crossdev/g++ can build an executable... yes
checking whether C++ compiler works with string... yes
checking whether the compiler supports exceptions... yes
checking whether the compiler recognizes bool as a built-in type... yes
checking whether the compiler implements namespaces... yes
checking whether <iostream> available... yes
checking whether the compiler implements the namespace std... yes
checking whether <math> available... no
checking whether C++ compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for perl... /usr/bin/perl
checking for ar... ar
checking for ranlib... ranlib
checking for killall... killall
checking for a BSD-compatible install... /usr/bin/install -c
checking whether install works... yes
checking for powerpc64-unknown-linux-gnu-ranlib... (cached) ranlib
checking whether install breaks libraries... no
checking whether mkdir -p works... yes
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for bash... /bin/bash
checking whether /bin/bash supports arrays... yes
Creating shared libraries using GNU
checking whether C compiler accepts option -fpic... yes
checking whether routines compiled with -fpic can be linked with ones compiled without -fpic... yes
checking for doctext... false
checking for location of doctext style files... unavailable
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking whether byte ordering is bigendian... yes
checking whether C compiler allows unaligned doubles... unknown
checking whether /mnt/ppc64/etc/crossdev/gcc supports __func__... yes
Using gcc to determine dependencies
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for max C struct integer alignment... 
checking for max C struct floating point alignment... 
checking for max C struct alignment of structs with doubles... 
checking for max C struct floating point alignment with long doubles... 
checking if alignment of structs with doubles is based on position... 
checking if alignment of structs with long long ints is based on position... 
checking if double alignment breaks rules, find actual alignment... 
checking for alignment restrictions on pointers... pointer
checking size of char... 1
checking size of unsigned char... 1
checking size of short... 2
checking size of unsigned short... 2
checking size of int... 4
checking size of unsigned int... 4
checking size of long... 8
checking size of unsigned long... 8
checking size of long long... 8
checking size of unsigned long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 16
checking size of void *... 8
checking for ANSI C header files... no
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking size of wchar_t... 4
checking size of float_int... 8
checking size of double_int... 16
checking size of long_int... 16
checking size of short_int... 8
checking size of two_int... 8
checking size of long_double_int... 32
checking sys/bitypes.h usability... yes
checking sys/bitypes.h presence... yes
checking for sys/bitypes.h... yes
checking inttypes.h usability... yes
checking inttypes.h presence... yes
checking for inttypes.h... yes
checking stdint.h usability... yes
checking stdint.h presence... yes
checking for stdint.h... yes
checking for int8_t... yes
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for uint8_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking size of _Bool... 1
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 32
checking for _Bool... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for size of Fortran type integer... 0
checking for size of Fortran type real... 0
checking for size of Fortran type double precision... 0
checking whether integer*1 is supported... yes
checking whether integer*2 is supported... yes
checking whether integer*4 is supported... yes
checking whether integer*8 is supported... yes
checking whether integer*16 is supported... yes
checking whether real*4 is supported... yes
checking whether real*8 is supported... yes
checking whether real*16 is supported... yes
configure: WARNING: Unable to determine size of an INTEGER type; using 4
configure: WARNING: Unable to determine size of a DOUBLE PRECISION type; using 8
configure: WARNING: Unable to determine size of a DOUBLE PRECISION type; using 8
checking for C type matching Fortran integer... unavailable
checking for size of MPI_Status... 20
checking whether real*8 is supported in Fortran 90... yes
configure: error: Unable to determine Fortran integer kinds for MPI types.  If you do not need Fortran 90, add --disable-f90 to the configure options.

!!! Please attach the following file when seeking support:
!!! /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/config.log
 [31;01m*[0m ERROR: sys-cluster/mpich2-1.2.1_p1-r1 failed (configure phase):
 [31;01m*[0m   econf failed
 [31;01m*[0m 
 [31;01m*[0m Call stack:
 [31;01m*[0m          ebuild.sh, line   93:  Called src_configure
 [31;01m*[0m        environment, line 4803:  Called econf '--enable-sharedlibs=gcc' '--with-thread-package=pthreads' '--enable-threads=default' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.2.1_p1-r1' '--with-pm=mpd:hydra' '--disable-mpe' '--disable-romio' '--enable-cxx'
 [31;01m*[0m   phase-helpers.sh, line  505:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m   			die "econf failed"
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the output of `emerge --info '=sys-cluster/mpich2-1.2.1_p1-r1'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=sys-cluster/mpich2-1.2.1_p1-r1'`.
 [31;01m*[0m The complete build log is located at '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/temp/environment'.
 [31;01m*[0m Working directory: '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1'
 [31;01m*[0m S: '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1'