* Package: sys-cluster/mpich2-1.2.1_p1-r1  * Repository: gentoo  * Maintainer: jsbronder@gentoo.org cluster@gentoo.org  * USE: cxx elibc_glibc fortran kernel_linux mpi-threads ppc64 userland_GNU  * FEATURES: preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: powerpc64-unknown-linux-gnu-gfortran * FC: powerpc64-unknown-linux-gnu-gfortran * mpi-threads requires threads, assuming that's what you want >>> Unpacking source... >>> Unpacking mpich2-1.2.1p1.tar.gz to /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work >>> Source unpacked in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work >>> Preparing source in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1 ... * Applying 0001-MPD_CONF_FILE-should-be-readable.patch ...  [ ok ] * Applying 0002-mpd_conf_file-search-order.patch ...  [ ok ] * Applying 0003-Fix-pkgconfig-for-mpich2-ch3-v1.2.1.patch ...  [ ok ] * Applying mpich2-1.2.1-fix-missing-libs.patch ...  [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1 ... * econf: updating mpich2-1.2.1p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/pm/hydra/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/pm/hydra/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/mpi/romio/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/mpi/romio/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_sample/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_sample/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_rlog/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/trace_rlog/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/mpe2/src/slog2sdk/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/src/mpe2/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/src/mpe2/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.2.1p1/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.2.1p1/confdb/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=powerpc64-unknown-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --enable-sharedlibs=gcc --with-thread-package=pthreads --enable-threads=default --sysconfdir=/etc/mpich2 --docdir=/usr/share/doc/mpich2-1.2.1_p1-r1 --with-pm=mpd:hydra --disable-mpe --disable-romio --enable-cxx configure: loading site script /usr/share/config.site configure: loading site script /usr/share/crossdev/include/site/linux configure: loading site script /usr/share/crossdev/include/site/linux-gnu Configuring MPICH2 version 1.2.1p1 with '--prefix=/usr' '--build=x86_64-pc-linux-gnu' '--host=powerpc64-unknown-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--libdir=/usr/lib64' '--enable-sharedlibs=gcc' '--with-thread-package=pthreads' '--enable-threads=default' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.2.1_p1-r1' '--with-pm=mpd:hydra' '--disable-mpe' '--disable-romio' '--enable-cxx' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=powerpc64-unknown-linux-gnu' 'CC=/mnt/ppc64/etc/crossdev/gcc' 'CFLAGS=-pipe -O2 -mcpu=cell -mabi=altivec -mgen-cell-microcode' 'LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu' 'F77=powerpc64-unknown-linux-gnu-gfortran' 'FFLAGS=-O2 -pipe' 'CXX=/mnt/ppc64/etc/crossdev/g++' 'CXXFLAGS=-pipe -O2 -mcpu=cell -mabi=altivec -mgen-cell-microcode' Running on system: Linux navier 2.6.18-308.16.1.el5 #1 SMP Tue Oct 2 22:01:43 EDT 2012 x86_64 Quad-Core AMD Opteron(tm) Processor 2352 AuthenticAMD GNU/Linux Executing mpich2prereq in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/mpid/ch3 with Executing mpich2prereq in /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis sourcing /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/pm/mpd/mpich2prereq sourcing /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/pm/hydra/mpich2prereq sourcing /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/src/pm/mpd/setup_pm checking for powerpc64-unknown-linux-gnu-gcc... /mnt/ppc64/etc/crossdev/gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... yes checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /mnt/ppc64/etc/crossdev/gcc accepts -g... yes checking for /mnt/ppc64/etc/crossdev/gcc option to accept ISO C89... none needed checking how to run the C preprocessor... /mnt/ppc64/etc/crossdev/gcc -E checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... checking whether the compiler sets __FUNCTION__... checking whether C compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for type of weak symbol alias support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute ((weak_import)) allowed... yes checking for multiple weak symbol support... yes checking for powerpc64-unknown-linux-gnu-g77... powerpc64-unknown-linux-gnu-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether powerpc64-unknown-linux-gnu-gfortran accepts -g... yes checking whether Fortran 77 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking how to get verbose linking output from powerpc64-unknown-linux-gnu-gfortran... -v checking for Fortran 77 libraries of powerpc64-unknown-linux-gnu-gfortran... -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/usr/lib/../lib64 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/usr/lib -lgfortran -lm checking whether powerpc64-unknown-linux-gnu-gfortran accepts the FLIBS found by autoconf... yes checking whether C can link with -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/lib/../lib64 -L/usr/powerpc64-unknown-linux-gnu/usr/lib/../lib64 -L/usr/lib/gcc/powerpc64-unknown-linux-gnu/4.7.2/../../../../powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/lib -L/usr/powerpc64-unknown-linux-gnu/usr/lib -lgfortran -lm... no checking for which libraries can be used... checking for linker for Fortran main programs... Use Fortran to link programs checking whether Fortran 77 and C objects are compatible... yes checking for Fortran 77 name mangling... lower underscore checking what libraries are needed to link Fortran programs with C routines that use stdio... none checking whether Fortran init will work with C... yes checking for powerpc64-unknown-linux-gnu-f90... no checking for powerpc64-unknown-linux-gnu-xlf90... no checking for powerpc64-unknown-linux-gnu-pgf90... no checking for powerpc64-unknown-linux-gnu-ifort... no checking for powerpc64-unknown-linux-gnu-epcf90... no checking for powerpc64-unknown-linux-gnu-f95... no checking for powerpc64-unknown-linux-gnu-fort... no checking for powerpc64-unknown-linux-gnu-xlf95... no checking for powerpc64-unknown-linux-gnu-lf95... no checking for powerpc64-unknown-linux-gnu-pathf95... no checking for powerpc64-unknown-linux-gnu-pathf90... no checking for powerpc64-unknown-linux-gnu-g95... no checking for powerpc64-unknown-linux-gnu-gfortran... powerpc64-unknown-linux-gnu-gfortran checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... yes checking whether powerpc64-unknown-linux-gnu-gfortran accepts -g... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) works... yes checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) is a cross-compiler... yes checking whether Fortran 90 works with Fortran 77... yes checking whether Fortran accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... -L checking for which Fortran libraries are needed to link C with Fortran... none checking whether powerpc64-unknown-linux-gnu-gfortran allows -shared -fpic... yes checking whether Fortran compiler processes .F files with C preprocessor... yes checking for powerpc64-unknown-linux-gnu-f90... (cached) powerpc64-unknown-linux-gnu-gfortran checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... (cached) yes checking whether powerpc64-unknown-linux-gnu-gfortran accepts -g... (cached) yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) works... yes checking whether the Fortran 90 compiler (powerpc64-unknown-linux-gnu-gfortran -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu) is a cross-compiler... yes checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking whether Fortran 90 accepts f90 suffix... yes checking whether Fortran 90 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none checking for f90 compiler vendor... gnu checking for how to build shared libraries for Fortran 90... Compile with powerpc64-unknown-linux-gnu-gfortran -shared -fpic and link using path argument -Wl,-rpath -Wl, checking whether we are using the GNU C++ compiler... yes checking whether /mnt/ppc64/etc/crossdev/g++ accepts -g... yes checking whether the C++ compiler /mnt/ppc64/etc/crossdev/g++ can build an executable... yes checking whether C++ compiler works with string... yes checking whether the compiler supports exceptions... yes checking whether the compiler recognizes bool as a built-in type... yes checking whether the compiler implements namespaces... yes checking whether available... yes checking whether the compiler implements the namespace std... yes checking whether available... no checking whether C++ compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for perl... /usr/bin/perl checking for ar... ar checking for ranlib... ranlib checking for killall... killall checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for powerpc64-unknown-linux-gnu-ranlib... (cached) ranlib checking whether install breaks libraries... no checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for bash... /bin/bash checking whether /bin/bash supports arrays... yes Creating shared libraries using GNU checking whether C compiler accepts option -fpic... yes checking whether routines compiled with -fpic can be linked with ones compiled without -fpic... yes checking for doctext... false checking for location of doctext style files... unavailable checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking whether byte ordering is bigendian... yes checking whether C compiler allows unaligned doubles... unknown checking whether /mnt/ppc64/etc/crossdev/gcc supports __func__... yes Using gcc to determine dependencies checking whether long double is supported... yes checking whether long long is supported... yes checking for max C struct integer alignment... checking for max C struct floating point alignment... checking for max C struct alignment of structs with doubles... checking for max C struct floating point alignment with long doubles... checking if alignment of structs with doubles is based on position... checking if alignment of structs with long long ints is based on position... checking if double alignment breaks rules, find actual alignment... checking for alignment restrictions on pointers... pointer checking size of char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of unsigned long... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking size of void *... 8 checking for ANSI C header files... no checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking size of wchar_t... 4 checking size of float_int... 8 checking size of double_int... 16 checking size of long_int... 16 checking size of short_int... 8 checking size of two_int... 8 checking size of long_double_int... 32 checking sys/bitypes.h usability... yes checking sys/bitypes.h presence... yes checking for sys/bitypes.h... yes checking inttypes.h usability... yes checking inttypes.h presence... yes checking for inttypes.h... yes checking stdint.h usability... yes checking stdint.h presence... yes checking for stdint.h... yes checking for int8_t... yes checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking size of _Bool... 1 checking size of float _Complex... 8 checking size of double _Complex... 16 checking size of long double _Complex... 32 checking for _Bool... yes checking for float _Complex... yes checking for double _Complex... yes checking for long double _Complex... yes checking for size of Fortran type integer... 0 checking for size of Fortran type real... 0 checking for size of Fortran type double precision... 0 checking whether integer*1 is supported... yes checking whether integer*2 is supported... yes checking whether integer*4 is supported... yes checking whether integer*8 is supported... yes checking whether integer*16 is supported... yes checking whether real*4 is supported... yes checking whether real*8 is supported... yes checking whether real*16 is supported... yes configure: WARNING: Unable to determine size of an INTEGER type; using 4 configure: WARNING: Unable to determine size of a DOUBLE PRECISION type; using 8 configure: WARNING: Unable to determine size of a DOUBLE PRECISION type; using 8 checking for C type matching Fortran integer... unavailable checking for size of MPI_Status... 20 checking whether real*8 is supported in Fortran 90... yes configure: error: Unable to determine Fortran integer kinds for MPI types. If you do not need Fortran 90, add --disable-f90 to the configure options. !!! Please attach the following file when seeking support: !!! /var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1/config.log * ERROR: sys-cluster/mpich2-1.2.1_p1-r1 failed (configure phase): * econf failed * * Call stack: * ebuild.sh, line 93: Called src_configure * environment, line 4803: Called econf '--enable-sharedlibs=gcc' '--with-thread-package=pthreads' '--enable-threads=default' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.2.1_p1-r1' '--with-pm=mpd:hydra' '--disable-mpe' '--disable-romio' '--enable-cxx' * phase-helpers.sh, line 505: Called die * The specific snippet of code: * die "econf failed" * * If you need support, post the output of `emerge --info '=sys-cluster/mpich2-1.2.1_p1-r1'`, * the complete build log and the output of `emerge -pqv '=sys-cluster/mpich2-1.2.1_p1-r1'`. * The complete build log is located at '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/temp/environment'. * Working directory: '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1' * S: '/var/tmp/cross-powerpc64-unknown-linux-gnu/portage/sys-cluster/mpich2-1.2.1_p1-r1/work/mpich2-1.2.1p1'