This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by cholmod configure 2.0.1, which was generated by GNU Autoconf 2.69. Invocation command line was $ /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-dependency-tracking --docdir=/usr/share/doc/cholmod-2.0.1 --enable-shared --disable-static --with-blas=-lblas --with-lapack=-llapack -lblas --without-doc --with-modify --with-matrixops --with-partition --with-supernodal --with-cuda --with-cublas-libs=-L/opt/cuda/lib64 -lcublas --with-cublas-cflags=-I/opt/cuda/include ## --------- ## ## Platform. ## ## --------- ## hostname = House uname -m = x86_64 uname -r = 3.6.11-gentoo uname -s = Linux uname -v = #1 SMP PREEMPT Fri Dec 28 23:52:27 WET 2012 /usr/bin/uname -p = Intel(R) Core(TM) i7 CPU 860 @ 2.80GHz /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/lib64/portage/bin/ebuild-helpers PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /opt/bin PATH: /usr/x86_64-pc-linux-gnu/gcc-bin/4.5.4 PATH: /opt/cuda/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2744: checking for a BSD-compatible install configure:2812: result: /usr/bin/install -c configure:2823: checking whether build environment is sane configure:2878: result: yes configure:3029: checking for a thread-safe mkdir -p configure:3068: result: /bin/mkdir -p configure:3075: checking for gawk configure:3091: found /usr/bin/gawk configure:3102: result: gawk configure:3113: checking whether make sets $(MAKE) configure:3135: result: yes configure:3251: checking build system type configure:3265: result: x86_64-pc-linux-gnu configure:3285: checking host system type configure:3298: result: x86_64-pc-linux-gnu configure:3339: checking how to print strings configure:3366: result: printf configure:3399: checking for style of include used by make configure:3427: result: GNU configure:3458: checking for x86_64-pc-linux-gnu-gcc configure:3474: found /usr/bin/x86_64-pc-linux-gnu-gcc configure:3485: result: x86_64-pc-linux-gnu-gcc configure:3754: checking for C compiler version configure:3763: x86_64-pc-linux-gnu-gcc --version >&5 x86_64-pc-linux-gnu-gcc (Gentoo 4.5.4 p1.0, pie-0.4.7) 4.5.4 Copyright (C) 2010 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3774: $? = 0 configure:3763: x86_64-pc-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.5.4/x86_64-pc-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.5.4/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-4.5.4/work/gcc-4.5.4/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.5.4 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.5.4 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.5.4/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.5.4/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --with-ppl --with-cloog --disable-ppl-version-check --with-cloog-include=/usr/include/cloog-ppl --disable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --disable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.5.4/python --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,java,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.5.4 p1.0, pie-0.4.7' Thread model: posix gcc version 4.5.4 (Gentoo 4.5.4 p1.0, pie-0.4.7) configure:3774: $? = 0 configure:3763: x86_64-pc-linux-gnu-gcc -V >&5 x86_64-pc-linux-gnu-gcc: '-V' option must have argument configure:3774: $? = 1 configure:3763: x86_64-pc-linux-gnu-gcc -qversion >&5 x86_64-pc-linux-gnu-gcc: unrecognized option '-qversion' x86_64-pc-linux-gnu-gcc: no input files configure:3774: $? = 1 configure:3794: checking whether the C compiler works configure:3816: x86_64-pc-linux-gnu-gcc -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:3820: $? = 0 configure:3868: result: yes configure:3871: checking for C compiler default output file name configure:3873: result: a.out configure:3879: checking for suffix of executables configure:3886: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:3890: $? = 0 configure:3912: result: configure:3934: checking whether we are cross compiling configure:3942: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:3946: $? = 0 configure:3953: ./conftest configure:3957: $? = 0 configure:3972: result: no configure:3977: checking for suffix of object files configure:3999: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:4003: $? = 0 configure:4024: result: o configure:4028: checking whether we are using the GNU C compiler configure:4047: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:4047: $? = 0 configure:4056: result: yes configure:4065: checking whether x86_64-pc-linux-gnu-gcc accepts -g configure:4085: x86_64-pc-linux-gnu-gcc -c -g conftest.c >&5 configure:4085: $? = 0 configure:4126: result: yes configure:4143: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 configure:4206: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:4206: $? = 0 configure:4219: result: none needed configure:4241: checking dependency style of x86_64-pc-linux-gnu-gcc configure:4352: result: none configure:4367: checking for a sed that does not truncate output configure:4431: result: /bin/sed configure:4449: checking for grep that handles long lines and -e configure:4507: result: /bin/grep configure:4512: checking for egrep configure:4574: result: /bin/grep -E configure:4579: checking for fgrep configure:4641: result: /bin/grep -F configure:4676: checking for ld used by x86_64-pc-linux-gnu-gcc configure:4743: result: /usr/x86_64-pc-linux-gnu/bin/ld configure:4750: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld configure:4765: result: yes configure:4777: checking for BSD- or MS-compatible name lister (nm) configure:4826: result: /usr/bin/nm -B configure:4956: checking the name lister (/usr/bin/nm -B) interface configure:4963: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:4966: /usr/bin/nm -B "conftest.o" configure:4969: output 0000000000000000 B some_variable configure:4976: result: BSD nm configure:4979: checking whether ln -s works configure:4983: result: yes configure:4991: checking the maximum length of command line arguments configure:5126: result: 1572864 configure:5143: checking whether the shell understands some XSI constructs configure:5153: result: yes configure:5157: checking whether the shell understands "+=" configure:5163: result: yes configure:5198: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:5238: result: func_convert_file_noop configure:5245: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:5265: result: func_convert_file_noop configure:5272: checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files configure:5279: result: -r configure:5313: checking for x86_64-pc-linux-gnu-objdump configure:5329: found /usr/bin/x86_64-pc-linux-gnu-objdump configure:5340: result: x86_64-pc-linux-gnu-objdump configure:5412: checking how to recognize dependent libraries configure:5614: result: pass_all configure:5659: checking for x86_64-pc-linux-gnu-dlltool configure:5689: result: no configure:5699: checking for dlltool configure:5729: result: no configure:5759: checking how to associate runtime and link libraries configure:5786: result: printf %s\n configure:5803: checking for x86_64-pc-linux-gnu-ar configure:5819: found /usr/bin/x86_64-pc-linux-gnu-ar configure:5830: result: x86_64-pc-linux-gnu-ar configure:5911: checking for archiver @FILE support configure:5928: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:5928: $? = 0 configure:5931: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 configure:5934: $? = 0 configure:5939: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 x86_64-pc-linux-gnu-ar: conftest.o: No such file or directory configure:5942: $? = 1 configure:5954: result: @ configure:5972: checking for x86_64-pc-linux-gnu-strip configure:5988: found /usr/bin/x86_64-pc-linux-gnu-strip configure:5999: result: x86_64-pc-linux-gnu-strip configure:6071: checking for x86_64-pc-linux-gnu-ranlib configure:6087: found /usr/bin/x86_64-pc-linux-gnu-ranlib configure:6098: result: x86_64-pc-linux-gnu-ranlib configure:6240: checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object configure:6360: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:6363: $? = 0 configure:6367: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:6370: $? = 0 configure:6436: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c conftstm.o >&5 configure:6439: $? = 0 configure:6477: result: ok configure:6514: checking for sysroot configure:6544: result: no configure:6621: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:6624: $? = 0 configure:6760: checking for x86_64-pc-linux-gnu-mt configure:6790: result: no configure:6800: checking for mt configure:6830: result: no configure:6850: checking if : is a manifest tool configure:6856: : '-?' configure:6864: result: no configure:7506: checking how to run the C preprocessor configure:7537: x86_64-pc-linux-gnu-gcc -E conftest.c configure:7537: $? = 0 configure:7551: x86_64-pc-linux-gnu-gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:7551: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | /* end confdefs.h. */ | #include configure:7576: result: x86_64-pc-linux-gnu-gcc -E configure:7596: x86_64-pc-linux-gnu-gcc -E conftest.c configure:7596: $? = 0 configure:7610: x86_64-pc-linux-gnu-gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:7610: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | /* end confdefs.h. */ | #include configure:7639: checking for ANSI C header files configure:7659: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7659: $? = 0 configure:7732: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:7732: $? = 0 configure:7732: ./conftest configure:7732: $? = 0 configure:7743: result: yes configure:7756: checking for sys/types.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for sys/stat.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for stdlib.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for string.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for memory.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for strings.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for inttypes.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for stdint.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7756: checking for unistd.h configure:7756: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7756: $? = 0 configure:7756: result: yes configure:7770: checking for dlfcn.h configure:7770: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:7770: $? = 0 configure:7770: result: yes configure:7976: checking for objdir configure:7991: result: .libs configure:8262: checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions configure:8280: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C configure:8284: $? = 0 configure:8297: result: no configure:8624: checking for x86_64-pc-linux-gnu-gcc option to produce PIC configure:8631: result: -fPIC -DPIC configure:8639: checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works configure:8657: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe -fPIC -DPIC -DPIC conftest.c >&5 configure:8661: $? = 0 configure:8674: result: yes configure:8703: checking if x86_64-pc-linux-gnu-gcc static flag -static works configure:8731: result: yes configure:8746: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o configure:8767: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe -o out/conftest2.o conftest.c >&5 configure:8771: $? = 0 configure:8793: result: yes configure:8801: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o configure:8848: result: yes configure:8881: checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries configure:10041: result: yes configure:10078: checking whether -lc should be explicitly linked in configure:10086: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:10089: $? = 0 configure:10104: x86_64-pc-linux-gnu-gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:10107: $? = 0 configure:10121: result: no configure:10281: checking dynamic linker characteristics configure:10805: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,-rpath -Wl,/foo conftest.c >&5 configure:10805: $? = 0 configure:11027: result: GNU/Linux ld.so configure:11134: checking how to hardcode library paths into programs configure:11159: result: immediate configure:11699: checking whether stripping libraries is possible configure:11704: result: yes configure:11739: checking if libtool supports shared libraries configure:11741: result: yes configure:11744: checking whether to build shared libraries configure:11765: result: yes configure:11768: checking whether to build static libraries configure:11772: result: no configure:11817: checking for x86_64-pc-linux-gnu-gcc configure:11844: result: x86_64-pc-linux-gnu-gcc configure:12113: checking for C compiler version configure:12122: x86_64-pc-linux-gnu-gcc --version >&5 x86_64-pc-linux-gnu-gcc (Gentoo 4.5.4 p1.0, pie-0.4.7) 4.5.4 Copyright (C) 2010 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:12133: $? = 0 configure:12122: x86_64-pc-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/4.5.4/x86_64-pc-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/4.5.4/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-4.5.4/work/gcc-4.5.4/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.5.4 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.5.4 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.5.4/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.5.4/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --with-ppl --with-cloog --disable-ppl-version-check --with-cloog-include=/usr/include/cloog-ppl --disable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --disable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.5.4/python --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,java,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.5.4 p1.0, pie-0.4.7' Thread model: posix gcc version 4.5.4 (Gentoo 4.5.4 p1.0, pie-0.4.7) configure:12133: $? = 0 configure:12122: x86_64-pc-linux-gnu-gcc -V >&5 x86_64-pc-linux-gnu-gcc: '-V' option must have argument configure:12133: $? = 1 configure:12122: x86_64-pc-linux-gnu-gcc -qversion >&5 x86_64-pc-linux-gnu-gcc: unrecognized option '-qversion' x86_64-pc-linux-gnu-gcc: no input files configure:12133: $? = 1 configure:12137: checking whether we are using the GNU C compiler configure:12165: result: yes configure:12174: checking whether x86_64-pc-linux-gnu-gcc accepts -g configure:12235: result: yes configure:12252: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 configure:12328: result: none needed configure:12350: checking dependency style of x86_64-pc-linux-gnu-gcc configure:12461: result: none configure:12481: checking float.h usability configure:12481: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12481: $? = 0 configure:12481: result: yes configure:12481: checking float.h presence configure:12481: x86_64-pc-linux-gnu-gcc -E conftest.c configure:12481: $? = 0 configure:12481: result: yes configure:12481: checking for float.h configure:12481: result: yes configure:12481: checking limits.h usability configure:12481: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12481: $? = 0 configure:12481: result: yes configure:12481: checking limits.h presence configure:12481: x86_64-pc-linux-gnu-gcc -E conftest.c configure:12481: $? = 0 configure:12481: result: yes configure:12481: checking for limits.h configure:12481: result: yes configure:12481: checking stddef.h usability configure:12481: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12481: $? = 0 configure:12481: result: yes configure:12481: checking stddef.h presence configure:12481: x86_64-pc-linux-gnu-gcc -E conftest.c configure:12481: $? = 0 configure:12481: result: yes configure:12481: checking for stddef.h configure:12481: result: yes configure:12481: checking for stdlib.h configure:12481: result: yes configure:12481: checking for string.h configure:12481: result: yes configure:12493: checking for uid_t in sys/types.h configure:12512: result: yes configure:12523: checking for int32_t configure:12523: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12523: $? = 0 configure:12523: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 conftest.c: In function 'main': conftest.c:66:53: warning: integer overflow in expression conftest.c:65:12: error: size of array 'test_array' is negative conftest.c:65:12: error: storage size of 'test_array' isn't constant configure:12523: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 32 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 1) | < (int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:12523: result: yes configure:12534: checking for mode_t configure:12534: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12534: $? = 0 configure:12534: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 conftest.c: In function 'main': conftest.c:64:21: error: expected expression before ')' token configure:12534: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((mode_t))) | return 0; | ; | return 0; | } configure:12534: result: yes configure:12545: checking for off_t configure:12545: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12545: $? = 0 configure:12545: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 conftest.c: In function 'main': conftest.c:64:20: error: expected expression before ')' token configure:12545: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:12545: result: yes configure:12556: checking for pid_t configure:12556: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12556: $? = 0 configure:12556: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 conftest.c: In function 'main': conftest.c:64:20: error: expected expression before ')' token configure:12556: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:12556: result: yes configure:12567: checking for size_t configure:12567: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12567: $? = 0 configure:12567: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 conftest.c: In function 'main': conftest.c:64:21: error: expected expression before ')' token configure:12567: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:12567: result: yes configure:12578: checking for ssize_t configure:12578: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12578: $? = 0 configure:12578: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 conftest.c: In function 'main': conftest.c:64:22: error: expected expression before ')' token configure:12578: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:12578: result: yes configure:12589: checking whether struct tm is in sys/time.h or time.h configure:12609: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12609: $? = 0 configure:12616: result: time.h configure:12624: checking for struct tm.tm_zone configure:12624: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:12624: $? = 0 configure:12624: result: yes configure:12695: checking for working alloca.h configure:12712: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12712: $? = 0 configure:12720: result: yes configure:12728: checking for alloca configure:12765: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12765: $? = 0 configure:12773: result: yes configure:12879: checking for error_at_line configure:12895: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12895: $? = 0 configure:12903: result: yes configure:12916: checking for stdlib.h configure:12916: result: yes configure:12926: checking for GNU libc compatible malloc configure:12950: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:12950: $? = 0 configure:12950: ./conftest configure:12950: $? = 0 configure:12960: result: yes configure:12981: checking whether time.h and sys/time.h may both be included configure:13001: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:13001: $? = 0 configure:13008: result: yes configure:13022: checking for sys/time.h configure:13022: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:13022: $? = 0 configure:13022: result: yes configure:13022: checking for unistd.h configure:13022: result: yes configure:13043: checking for alarm configure:13043: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13043: $? = 0 configure:13043: result: yes configure:13056: checking for working mktime configure:13258: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13258: $? = 0 configure:13258: ./conftest configure:13258: $? = 0 configure:13268: result: yes configure:13281: checking for stdlib.h configure:13281: result: yes configure:13291: checking for GNU libc compatible realloc configure:13315: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13315: $? = 0 configure:13315: ./conftest configure:13315: $? = 0 configure:13325: result: yes configure:13346: checking for working strtod configure:13387: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 conftest.c: In function 'main': conftest.c:95:12: warning: ignoring return value of 'strtod', declared with attribute warn_unused_result configure:13387: $? = 0 configure:13387: ./conftest configure:13387: $? = 0 configure:13397: result: yes configure:13462: checking for atexit configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for localtime_r configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for mblen configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for putenv configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for realpath configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for rpmatch configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for select configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for setenv configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for stime configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for strtol configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for strtoul configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for strtoull configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13462: checking for tzset configure:13462: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c >&5 configure:13462: $? = 0 configure:13462: result: yes configure:13473: checking for sqrt in -lm configure:13498: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c -lm >&5 conftest.c:60:6: warning: conflicting types for built-in function 'sqrt' configure:13498: $? = 0 configure:13507: result: yes configure:13519: checking for clock_gettime in -lrt configure:13544: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed conftest.c -lrt -lm >&5 configure:13544: $? = 0 configure:13553: result: yes configure:13578: checking for x86_64-pc-linux-gnu-pkg-config configure:13611: result: no configure:13621: checking for pkg-config configure:13639: found /usr/bin/pkg-config configure:13651: result: /usr/bin/pkg-config configure:13676: checking pkg-config is at least version 0.9.0 configure:13679: result: yes configure:13712: checking for SUITESPARSECONFIG configure:13719: $PKG_CONFIG --exists --print-errors "suitesparseconfig" configure:13722: $? = 0 configure:13736: $PKG_CONFIG --exists --print-errors "suitesparseconfig" configure:13739: $? = 0 configure:13797: result: yes configure:13826: checking SuiteSparse_config.h usability configure:13826: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe conftest.c >&5 configure:13826: $? = 0 configure:13826: result: yes configure:13826: checking SuiteSparse_config.h presence configure:13826: x86_64-pc-linux-gnu-gcc -E conftest.c configure:13826: $? = 0 configure:13826: result: yes configure:13826: checking for SuiteSparse_config.h configure:13826: result: yes configure:13829: checking for SuiteSparse_malloc in -lsuitesparseconfig configure:13854: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -lsuitesparseconfig conftest.c -lsuitesparseconfig -lrt -lm >&5 configure:13854: $? = 0 configure:13864: result: yes configure:13900: checking whether to build user guide configure:14167: result: no configure:14346: checking cublas_v2.h usability configure:14346: x86_64-pc-linux-gnu-gcc -c -march=native -O2 -pipe -I/opt/cuda/include conftest.c >&5 configure:14346: $? = 0 configure:14346: result: yes configure:14346: checking cublas_v2.h presence configure:14346: x86_64-pc-linux-gnu-gcc -E -I/opt/cuda/include conftest.c configure:14346: $? = 0 configure:14346: result: yes configure:14346: checking for cublas_v2.h configure:14346: result: yes configure:14349: checking for cublasDgemm in -lcublas configure:14374: x86_64-pc-linux-gnu-gcc -o conftest -march=native -O2 -pipe -I/opt/cuda/include -Wl,-O1 -Wl,--as-needed -L/opt/cuda/lib64 -lcublas conftest.c -lcublas -lrt -lm >&5 /var/tmp/portage/sci-libs/cholmod-2.0.1/temp/ccKrajc0.o: In function `main': conftest.c:(.text+0x7): undefined reference to `cublasDgemm' collect2: ld returned 1 exit status configure:14374: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "cholmod 2.0.1" | #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "2.0.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRUCT_TM_TM_ZONE 1 | #define HAVE_TM_ZONE 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STDLIB_H 1 | #define HAVE_MALLOC 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ALARM 1 | #define HAVE_STDLIB_H 1 | #define HAVE_REALLOC 1 | #define HAVE_ATEXIT 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_MBLEN 1 | #define HAVE_PUTENV 1 | #define HAVE_REALPATH 1 | #define HAVE_RPMATCH 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_STIME 1 | #define HAVE_STRTOL 1 | #define HAVE_STRTOUL 1 | #define HAVE_STRTOULL 1 | #define HAVE_TZSET 1 | #define HAVE_LIBM 1 | #define HAVE_LIBRT 1 | #define HAVE_SUITESPARSECONFIG 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cublasDgemm (); | int | main () | { | return cublasDgemm (); | ; | return 0; | } configure:14384: result: no configure:14412: error: Could not find cuda blas library ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_int32_t=yes ac_cv_env_AMD_CFLAGS_set= ac_cv_env_AMD_CFLAGS_value= ac_cv_env_AMD_LIBS_set= ac_cv_env_AMD_LIBS_value= ac_cv_env_BLAS_CFLAGS_set= ac_cv_env_BLAS_CFLAGS_value= ac_cv_env_BLAS_LIBS_set= ac_cv_env_BLAS_LIBS_value= ac_cv_env_CAMD_CFLAGS_set= ac_cv_env_CAMD_CFLAGS_value= ac_cv_env_CAMD_LIBS_set= ac_cv_env_CAMD_LIBS_value= ac_cv_env_CCOLAMD_CFLAGS_set= ac_cv_env_CCOLAMD_CFLAGS_value= ac_cv_env_CCOLAMD_LIBS_set= ac_cv_env_CCOLAMD_LIBS_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-march=native -O2 -pipe' ac_cv_env_COLAMD_CFLAGS_set= ac_cv_env_COLAMD_CFLAGS_value= ac_cv_env_COLAMD_LIBS_set= ac_cv_env_COLAMD_LIBS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CUBLAS_CFLAGS_set= ac_cv_env_CUBLAS_CFLAGS_value= ac_cv_env_CUBLAS_LIBS_set= ac_cv_env_CUBLAS_LIBS_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-O2 -pipe' ac_cv_env_LAPACK_CFLAGS_set= ac_cv_env_LAPACK_CFLAGS_value= ac_cv_env_LAPACK_LIBS_set= ac_cv_env_LAPACK_LIBS_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-O1 -Wl,--as-needed' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_METIS_CFLAGS_set= ac_cv_env_METIS_CFLAGS_value= ac_cv_env_METIS_LIBS_set= ac_cv_env_METIS_LIBS_value= ac_cv_env_PKG_CONFIG_LIBDIR_set= ac_cv_env_PKG_CONFIG_LIBDIR_value= ac_cv_env_PKG_CONFIG_PATH_set=set ac_cv_env_PKG_CONFIG_PATH_value=/usr/lib64/pkgconfig ac_cv_env_PKG_CONFIG_set= ac_cv_env_PKG_CONFIG_value= ac_cv_env_SUITESPARSECONFIG_CFLAGS_set= ac_cv_env_SUITESPARSECONFIG_CFLAGS_value= ac_cv_env_SUITESPARSECONFIG_LIBS_set= ac_cv_env_SUITESPARSECONFIG_LIBS_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-pc-linux-gnu ac_cv_env_host_alias_set=set ac_cv_env_host_alias_value=x86_64-pc-linux-gnu ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_alarm=yes ac_cv_func_alloca_works=yes ac_cv_func_atexit=yes ac_cv_func_localtime_r=yes ac_cv_func_malloc_0_nonnull=yes ac_cv_func_mblen=yes ac_cv_func_putenv=yes ac_cv_func_realloc_0_nonnull=yes ac_cv_func_realpath=yes ac_cv_func_rpmatch=yes ac_cv_func_select=yes ac_cv_func_setenv=yes ac_cv_func_stime=yes ac_cv_func_strtod=yes ac_cv_func_strtol=yes ac_cv_func_strtoul=yes ac_cv_func_strtoull=yes ac_cv_func_tzset=yes ac_cv_func_working_mktime=yes ac_cv_header_SuiteSparse_config_h=yes ac_cv_header_cublas_v2_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_float_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_limits_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_cublas_cublasDgemm=no ac_cv_lib_error_at_line=yes ac_cv_lib_m_sqrt=yes ac_cv_lib_rt_clock_gettime=yes ac_cv_lib_suitesparseconfig_SuiteSparse_malloc=yes ac_cv_member_struct_tm_tm_zone=yes ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_SED=/bin/sed ac_cv_path_ac_pt_PKG_CONFIG=/usr/bin/pkg-config ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=x86_64-pc-linux-gnu-ar ac_cv_prog_AWK=gawk ac_cv_prog_CC=x86_64-pc-linux-gnu-gcc ac_cv_prog_CPP='x86_64-pc-linux-gnu-gcc -E' ac_cv_prog_OBJDUMP=x86_64-pc-linux-gnu-objdump ac_cv_prog_RANLIB=x86_64-pc-linux-gnu-ranlib ac_cv_prog_STRIP=x86_64-pc-linux-gnu-strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_struct_tm=time.h ac_cv_type_mode_t=yes ac_cv_type_off_t=yes ac_cv_type_pid_t=yes ac_cv_type_size_t=yes ac_cv_type_ssize_t=yes ac_cv_type_uid_t=yes ac_cv_working_alloca_h=yes am_cv_CC_dependencies_compiler_type=none ax_cv_has_cublas=no ax_cv_has_suitesparseconfig=yes ax_cv_symbol=cublasDgemm lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/x86_64-pc-linux-gnu/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop pkg_cv_SUITESPARSECONFIG_CFLAGS=' ' pkg_cv_SUITESPARSECONFIG_LIBS='-lsuitesparseconfig ' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run aclocal-1.12' ALLOCA='' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='#' AMD_CFLAGS='' AMD_LIBS='' AMD_PC='' AMTAR='$${TAR-tar}' AR='x86_64-pc-linux-gnu-ar' AUTOCONF='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run autoconf' AUTOHEADER='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run autoheader' AUTOMAKE='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run automake-1.12' AWK='gawk' BIBTEX='' BLAS_CFLAGS='' BLAS_LIBS='' BLAS_PC='' BUILD_DOCS_FALSE='' BUILD_DOCS_TRUE='#' CAMD_CFLAGS='' CAMD_LIBS='' CAMD_PC='' CC='x86_64-pc-linux-gnu-gcc' CCDEPMODE='depmode=none' CCOLAMD_CFLAGS='' CCOLAMD_LIBS='' CCOLAMD_PC='' CFLAGS='-march=native -O2 -pipe' COLAMD_CFLAGS='' COLAMD_LIBS='' COLAMD_PC='' CPP='x86_64-pc-linux-gnu-gcc -E' CPPFLAGS='' CUBLAS_CFLAGS='-I/opt/cuda/include' CUBLAS_LIBS='-L/opt/cuda/lib64 -lcublas' CUBLAS_PC='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' EXPAND='' F77='' FFLAGS='-O2 -pipe' FGREP='/bin/grep -F' FLIBS='' GREP='/bin/grep' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LAPACK_CFLAGS='' LAPACK_LIBS='' LAPACK_PC='' LD='/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64' LDFLAGS='-Wl,-O1 -Wl,--as-needed' LIBOBJS='' LIBS='-lrt -lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/missing --run makeinfo' MANIFEST_TOOL=':' METIS_CFLAGS='' METIS_LIBS='' METIS_PC='' MKDIR_P='/bin/mkdir -p' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='x86_64-pc-linux-gnu-objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='cholmod' PACKAGE_BUGREPORT='davis@cise.ufl.edu' PACKAGE_NAME='cholmod' PACKAGE_STRING='cholmod 2.0.1' PACKAGE_TARNAME='cholmod' PACKAGE_URL='' PACKAGE_VERSION='2.0.1' PATH_SEPARATOR=':' PC_LIBS='' PDFLATEX='' PKG_CONFIG='/usr/bin/pkg-config' PKG_CONFIG_LIBDIR='' PKG_CONFIG_PATH='/usr/lib64/pkgconfig' POW_LIB='' RANLIB='x86_64-pc-linux-gnu-ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='x86_64-pc-linux-gnu-strip' SUITESPARSECONFIG_CFLAGS=' ' SUITESPARSECONFIG_LIBS='-lsuitesparseconfig ' SUITESPARSECONFIG_PC='suitesparseconfig' VERSION='2.0.1' WITH_CHECK_FALSE='' WITH_CHECK_TRUE='' WITH_CHOLESKY_FALSE='' WITH_CHOLESKY_TRUE='' WITH_MATRIXOPS_FALSE='' WITH_MATRIXOPS_TRUE='' WITH_MODIFY_FALSE='' WITH_MODIFY_TRUE='' WITH_PARTITION_FALSE='' WITH_PARTITION_TRUE='' WITH_SUPERNODAL_FALSE='' WITH_SUPERNODAL_TRUE='' ac_ct_AR='' ac_ct_CC='' ac_ct_DUMPBIN='' ac_ct_F77='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-pc-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='/usr/share' datarootdir='${prefix}/share' docdir='/usr/share/doc/cholmod-2.0.1' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='x86_64-pc-linux-gnu' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='/usr/share/info' install_sh='${SHELL} /var/tmp/portage/sci-libs/cholmod-2.0.1/work/cholmod-2.0.1/config/install-sh' libdir='/usr/lib64' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='/var/lib' mandir='/usr/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "cholmod" #define PACKAGE_TARNAME "cholmod" #define PACKAGE_VERSION "2.0.1" #define PACKAGE_STRING "cholmod 2.0.1" #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" #define PACKAGE_URL "" #define PACKAGE "cholmod" #define VERSION "2.0.1" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_FLOAT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_STRUCT_TM_TM_ZONE 1 #define HAVE_TM_ZONE 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STDLIB_H 1 #define HAVE_MALLOC 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ALARM 1 #define HAVE_STDLIB_H 1 #define HAVE_REALLOC 1 #define HAVE_ATEXIT 1 #define HAVE_LOCALTIME_R 1 #define HAVE_MBLEN 1 #define HAVE_PUTENV 1 #define HAVE_REALPATH 1 #define HAVE_RPMATCH 1 #define HAVE_SELECT 1 #define HAVE_SETENV 1 #define HAVE_STIME 1 #define HAVE_STRTOL 1 #define HAVE_STRTOUL 1 #define HAVE_STRTOULL 1 #define HAVE_TZSET 1 #define HAVE_LIBM 1 #define HAVE_LIBRT 1 #define HAVE_SUITESPARSECONFIG 1 configure: exit 1