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Gentoo's Bugzilla – Attachment 331558 Details for
Bug 446122
[science overlay] sci-chemistry/apbs-1.3-r3 with sci-libs/mkl-11.0.0.079 - ../../src/aaa_lib/.libs/libapbs.so: undefined reference to `GOMP_parallel_start'
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build.log
build.log (text/plain), 147.36 KB, created by
urcindalo
on 2012-12-05 17:31:28 UTC
(
hide
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Description:
build.log
Filename:
MIME Type:
Creator:
urcindalo
Created:
2012-12-05 17:31:28 UTC
Size:
147.36 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: sci-chemistry/apbs-1.3-r3 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: jlec@gentoo.org sci-chemistry@gentoo.org >[32;01m * [39;49;00mUSE: amd64 arpack consolekit elibc_glibc kernel_linux mpi multilib openmp policykit tools userland_GNU >[32;01m * [39;49;00mFEATURES: sandbox >>>> [1m[37mcfg-update-1.8.2-r1[0m[0m: Creating checksum index... > [32;01m*[0m Using following Fortran compiler: > [32;01m*[0m F77: x86_64-pc-linux-gnu-gfortran > [32;01m*[0m FC: x86_64-pc-linux-gnu-gfortran > [32;01m*[0m You can specify the max amount of RAM used > [32;01m*[0m by setting MAXMEM="your size in MB" >>>> Unpacking source... >>>> Unpacking apbs-1.3-source.tar.gz to /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work >>>> Source unpacked in /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work >>>> Preparing source in /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source ... > [32;01m*[0m Applying 0001-autoconf-2.68.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0002-python-linking.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0003-apbs-1.3-pkg-config-file.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0004-apbs-1.3-system-zlib.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0005-apbs-1.3-linking.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0006-apbs-1.3-clean-targets.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0007-apbs-1.3-configure.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0008-apbs-1.3-broken-test.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0009-apbs-1.3-use-pkg-config-for-zlib-detection.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0010-apbs-1.3-use-OPENMP_CFLAGS-instead-of-OPENMP_LIBS.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0011-apbs-1.3-shared-linking.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0012-apbs-1.3-python-linking-correction.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0013-apbs-1.3-tools-installation.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0014-apbs-1.3-pythonlib-fix.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0015-apbs-1.3-pythonlib-fix.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0016-apbs-1.3-apbs.pc-in-AC_CONFIG_FILES.patch ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running elibtoolize in: apbs-1.3-source/config/ > [32;01m*[0m Applying portage/1.5.10 patch ... > [32;01m*[0m Applying max_cmd_len/1.5.20 patch ... > [32;01m*[0m Applying sed/1.5.6 patch ... > [32;01m*[0m Applying as-needed/1.5 patch ... > [32;01m*[0m Applying uclibc-ltconf/1.3.0 patch ... > [32;01m*[0m Running eautoreconf in '/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source' ... > [32;01m*[0m Running libtoolize --install --copy --force --automake ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running aclocal ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoconf ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoheader ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running automake --add-missing --copy ... >[A[119C [34;01m[ [32;01mok[34;01m ][0m >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source ... >>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source" > * econf: updating apbs-1.3-source/config/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating apbs-1.3-source/config/config.sub with /usr/share/gnuconfig/config.sub >/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-dependency-tracking --docdir=/usr/share/doc/apbs-1.3-r3 --enable-shared --disable-static --docdir=/usr/share/doc/apbs-1.3-r3 --with-arpack=/usr/lib64 --with-openmpi=/usr --disable-fetk --enable-tools --disable-maloc-rebuild --enable-shared --enable-openmp --disable-python >checking build system type... x86_64-pc-linux-gnu >checking host system type... x86_64-pc-linux-gnu >checking target system type... x86_64-pc-linux-gnu >checking how to print strings... printf >checking for x86_64-pc-linux-gnu-gcc... /usr/bin/mpicc >checking whether the C compiler works... yes >checking for C compiler default output file name... a.out >checking for suffix of executables... >checking whether we are cross compiling... no >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether /usr/bin/mpicc accepts -g... yes >checking for /usr/bin/mpicc option to accept ISO C89... none needed >checking for a sed that does not truncate output... /bin/sed >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for fgrep... /bin/grep -F >checking for ld used by /usr/bin/mpicc... /usr/x86_64-pc-linux-gnu/bin/ld >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B >checking the name lister (/usr/bin/nm -B) interface... BSD nm >checking whether ln -s works... yes >checking the maximum length of command line arguments... 1572864 >checking whether the shell understands some XSI constructs... yes >checking whether the shell understands "+="... yes >checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop >checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop >checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r >checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump >checking how to recognize dependent libraries... pass_all >checking for x86_64-pc-linux-gnu-dlltool... no >checking for dlltool... no >checking how to associate runtime and link libraries... printf %s\n >checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar >checking for archiver @FILE support... @ >checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip >checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib >checking for gawk... gawk >checking command to parse /usr/bin/nm -B output from /usr/bin/mpicc object... ok >checking for sysroot... no >checking for x86_64-pc-linux-gnu-mt... no >checking for mt... no >checking if : is a manifest tool... no >checking how to run the C preprocessor... /usr/bin/mpicc -E >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for dlfcn.h... yes >checking for objdir... .libs >checking if /usr/bin/mpicc supports -fno-rtti -fno-exceptions... no >checking for /usr/bin/mpicc option to produce PIC... -fPIC -DPIC >checking if /usr/bin/mpicc PIC flag -fPIC -DPIC works... yes >checking if /usr/bin/mpicc static flag -static works... no >checking if /usr/bin/mpicc supports -c -o file.o... yes >checking if /usr/bin/mpicc supports -c -o file.o... (cached) yes >checking whether the /usr/bin/mpicc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for x86_64-pc-linux-gnu-g77... /usr/bin/mpif77 >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether /usr/bin/mpif77 accepts -g... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for /usr/bin/mpif77 option to produce PIC... -fPIC >checking if /usr/bin/mpif77 PIC flag -fPIC works... yes >checking if /usr/bin/mpif77 static flag -static works... no >checking if /usr/bin/mpif77 supports -c -o file.o... yes >checking if /usr/bin/mpif77 supports -c -o file.o... (cached) yes >checking whether the /usr/bin/mpif77 linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... (cached) GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking how to get verbose linking output from /usr/bin/mpif77... -v >checking for Fortran 77 libraries of /usr/bin/mpif77... -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread >checking for dummy main to link with Fortran 77 libraries... none >checking how to get verbose linking output from /usr/bin/mpif77... (cached) -v >checking for Fortran 77 libraries of /usr/bin/mpif77... (cached) -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread >checking for a BSD-compatible install... /usr/bin/install -c >checking whether build environment is sane... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking whether make sets $(MAKE)... yes >checking for style of include used by make... GNU >checking dependency style of /usr/bin/mpicc... none >checking for --enable-fast option... no >checking for --enable-python... no >checking for x86_64-pc-linux-gnu-icc... (cached) /usr/bin/mpicc >checking whether we are using the GNU C compiler... (cached) yes >checking whether /usr/bin/mpicc accepts -g... (cached) yes >checking for /usr/bin/mpicc option to accept ISO C89... (cached) none needed >checking for x86_64-pc-linux-gnu-gcc... (cached) /usr/bin/mpicc >checking whether we are using the GNU C compiler... (cached) yes >checking whether /usr/bin/mpicc accepts -g... (cached) yes >checking for /usr/bin/mpicc option to accept ISO C89... (cached) none needed >checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ >checking whether we are using the GNU C++ compiler... yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes >checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E >checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC >checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes >checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... (cached) GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking dependency style of x86_64-pc-linux-gnu-g++... none >checking for x86_64-pc-linux-gnu-ifort... (cached) /usr/bin/mpif77 >checking whether we are using the GNU Fortran 77 compiler... (cached) yes >checking whether /usr/bin/mpif77 accepts -g... (cached) yes >checking if Fortran 77 compiler accepts -nofor_main... yes >checking if Fortran 77 compilers requires -nofor_main... no >checking how f77 mangles function names... lowercase-underscore >checking how to run the C preprocessor... /usr/bin/mpicc -E >checking for pow in -lm... yes >checking for strerrno in -liberty... yes >checking for gethostbyname... yes >checking for connect... yes >checking for thr_create... no >checking for thr_create in -lthread... no >checking for time... yes >checking for rand... yes >checking for srand... yes >checking the machine epsilon for VFLOOR... yes >The machine epsilon for this system is: 1.19209E-07 >configure: ----------------------------------------------------------- >configure: ---------- begin configuring for MALOC linkage ------------ >configure: ----------------------------------------------------------- >checking for --with-fetk-include option... no >checking for --with-fetk-library option... no >configure: Using MALOC headers in /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include >configure: Using MALOC libraries in /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib >checking for --with-mpich option... no >checking for --with-mpich2 option... no >checking for --with-lam option... no >checking for --with-openmpi option... /usr >checking for /usr/include/mpi.h... yes >checking for /usr/lib/libmpi.a... no >checking for /usr/lib/libmpi.so... yes >checking for /usr/lib/libmpi.dylib... no >configure: --------------------------------------------------------------- >configure: ---------- begin configuring for Python wrappers -------------- >configure: --------------------------------------------------------------- >checking for --enable-python... no >configure: Python wrappers disabled >checking for python... /usr/bin/python >checking for --disable-maloc-rebuild... yes >configure: Will not rebuild MALOC...skipping >checking for maloc_needs_rl in -lmaloc... no >configure: ------------------------------------------------------------ >configure: ---------- begin configuring for FEtk linkage -------------- >configure: ------------------------------------------------------------ >checking for --disable-fetk... yes >configure: FEtk disabled at user request. >configure: --------------------------------------------------------------- >configure: ------------ begin processing APBS configure options ---------- >configure: --------------------------------------------------------------- >checking for EMBED macro can be used... yes >checking --enable-pansi... no >checking for strcasecmp... yes >checking for --disable-tools... no >configure: tools will be compiled >checking for x86_64-pc-linux-gnu-pkg-config... no >checking for pkg-config... /usr/bin/pkg-config >checking pkg-config is at least version 0.9.0... yes >checking for BLAS... yes >checking for ZLIB... yes >checking for --with-arpack... -larpack -L/usr/lib64 >checking for --disable-inline... no >configure: inline functions will be used >checking for --enable-tinker... no >checking for --enable-abps-quiet... yes >checking for /usr/bin/mpicc option to support OpenMP... -fopenmp >configure: pkgconfig directory is ${libdir}/pkgconfig >configure: creating ./config.status >config.status: creating Makefile >config.status: creating contrib/Makefile >config.status: creating contrib/pmgZ/Makefile >config.status: creating contrib/aqua/Makefile >config.status: creating tools/Makefile >config.status: creating tools/mesh/Makefile >config.status: creating tools/manip/Makefile >config.status: creating tools/python/Makefile >config.status: creating tools/arpack/Makefile >config.status: creating tools/python/vgrid/Makefile >config.status: creating src/Makefile >config.status: creating src/generic/Makefile >config.status: creating src/mg/Makefile >config.status: creating src/fem/Makefile >config.status: creating src/aaa_inc/Makefile >config.status: creating src/aaa_inc/apbs/Makefile >config.status: creating src/aaa_lib/Makefile >config.status: creating examples/Makefile >config.status: creating examples/actin-dimer/Makefile >config.status: creating examples/alkanes/Makefile >config.status: creating examples/born/Makefile >config.status: creating examples/FKBP/Makefile >config.status: creating examples/hca-bind/Makefile >config.status: creating examples/ion-pmf/Makefile >config.status: creating examples/ion-protein/Makefile >config.status: creating examples/ionize/Makefile >config.status: creating examples/pka-lig/Makefile >config.status: creating examples/point-pmf/Makefile >config.status: creating examples/protein-rna/Makefile >config.status: creating examples/smpbe/Makefile >config.status: creating examples/solv/Makefile >config.status: creating examples/opal/Makefile >config.status: creating bin/Makefile >config.status: creating apbs.pc >config.status: creating src/aaa_inc/apbscfg.h >config.status: executing libtool commands >config.status: executing depfiles commands >configure: > >APBS to be compiled with following settings: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp >APBS to be compiled with following settings: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe >APBS to be linked with following libraries : -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >APBS to be compiled with following includes: -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include > >Please type "make; make install" > >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source ... >>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source" >make -j5 -j1 >Making all in contrib >make[1]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib' >Making all in pmgZ >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/pmgZ' >Making all in . >make[3]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/pmgZ' >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o buildAd.lo buildAd.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c buildAd.f -fPIC -o .libs/buildAd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 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-lutil -lgfortran -lm -lpthread -O2 -pipe -c -o buildPd.lo buildPd.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c buildPd.f -fPIC -o .libs/buildPd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o cgd.lo cgd.f >libtool: compile: /usr/bin/mpif77 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-lgfortran -lm -lpthread -O2 -pipe -c gsd.f -fPIC -o .libs/gsd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o mainsubd.lo mainsubd.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c mainsubd.f -fPIC -o .libs/mainsubd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o matvecd.lo matvecd.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c matvecd.f -fPIC -o .libs/matvecd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 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-lutil -lgfortran -lm -lpthread -O2 -pipe -c newdrvd.f -fPIC -o .libs/newdrvd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o newtond.lo newtond.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c newtond.f -fPIC -o .libs/newtond.o >/bin/sh ../../libtool 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-lgfortran -lm -lpthread -O2 -pipe -c nwjdrvd.f -fPIC -o .libs/nwjdrvd.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o powerd.lo powerd.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c powerd.f -fPIC -o .libs/powerd.o >/bin/sh ../../libtool --tag=F77 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-DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c gsdc.c -fPIC -DPIC -o .libs/gsdc.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o nsordrvdc.lo nsordrvdc.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c nsordrvdc.c -fPIC -DPIC -o .libs/nsordrvdc.o >/bin/sh ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -Wl,-O1 -Wl,--as-needed -o libapbspmgz.la buildAd.lo buildBd.lo buildGd.lo buildPd.lo cgd.lo cgmgd.lo cgmgdrvd.lo dlphsubd.lo gsd.lo mainsubd.lo matvecd.lo mgcsd.lo mgdrvd.lo mgfasd.lo mgsubd.lo mikpckd.lo mlinpckd.lo ncgd.lo ncgdrvd.lo newdrvd.lo newtond.lo ngsd.lo ngsdrvd.lo ninterpd.lo nrchd.lo nrchdrvd.lo nsmoothd.lo nsord.lo nsordrvd.lo nwjd.lo nwjdrvd.lo powerd.lo rchd.lo smoothd.lo sord.lo wjd.lo gsdc.lo nsordrvdc.lo >libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libapbspmgz.a .libs/buildAd.o .libs/buildBd.o .libs/buildGd.o .libs/buildPd.o .libs/cgd.o .libs/cgmgd.o .libs/cgmgdrvd.o .libs/dlphsubd.o .libs/gsd.o .libs/mainsubd.o .libs/matvecd.o .libs/mgcsd.o .libs/mgdrvd.o .libs/mgfasd.o .libs/mgsubd.o .libs/mikpckd.o .libs/mlinpckd.o .libs/ncgd.o .libs/ncgdrvd.o .libs/newdrvd.o .libs/newtond.o .libs/ngsd.o .libs/ngsdrvd.o .libs/ninterpd.o .libs/nrchd.o .libs/nrchdrvd.o .libs/nsmoothd.o .libs/nsord.o .libs/nsordrvd.o .libs/nwjd.o .libs/nwjdrvd.o .libs/powerd.o .libs/rchd.o .libs/smoothd.o .libs/sord.o .libs/wjd.o .libs/gsdc.o .libs/nsordrvdc.o >libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libapbspmgz.a >libtool: link: ( cd ".libs" && rm -f "libapbspmgz.la" && ln -s "../libapbspmgz.la" "libapbspmgz.la" ) >cp -p ../../src/mg/apbs/*.h ../../src/aaa_inc/apbs/. >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/pmgZ' >make[2]: se sale del directorio 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-lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c CGMG_Solver.f -fPIC -o .libs/CGMG_Solver.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o Galerkin.lo Galerkin.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c Galerkin.f -fPIC -o .libs/Galerkin.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o LinMG.lo LinMG.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c LinMG.f -fPIC -o .libs/LinMG.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o MatVect.lo MatVect.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c MatVect.f -fPIC -o .libs/MatVect.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o Newton_Solver_pbe.lo Newton_Solver_pbe.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c Newton_Solver_pbe.f -fPIC -o .libs/Newton_Solver_pbe.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o Smoothing.lo Smoothing.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c Smoothing.f -fPIC -o .libs/Smoothing.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o PrintInfo.lo PrintInfo.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c PrintInfo.f -fPIC -o .libs/PrintInfo.o >/bin/sh ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -Wl,-O1 -Wl,--as-needed -o libapbsaqua.la Blaswrapper.lo Cartesian_grid.lo CGMG_Solver.lo Galerkin.lo LinMG.lo MatVect.lo Newton_Solver_pbe.lo Smoothing.lo PrintInfo.lo >libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libapbsaqua.a .libs/Blaswrapper.o .libs/Cartesian_grid.o .libs/CGMG_Solver.o .libs/Galerkin.o .libs/LinMG.o .libs/MatVect.o .libs/Newton_Solver_pbe.o .libs/Smoothing.o .libs/PrintInfo.o >libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libapbsaqua.a >libtool: link: ( cd ".libs" && rm -f "libapbsaqua.la" && ln -s "../libapbsaqua.la" "libapbsaqua.la" ) >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/aqua' >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/aqua' >Making all in . >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib' >make[2]: No se hace nada para `all-am'. >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib' >make[1]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib' >Making all in src >make[1]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src' >Making all in generic >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/generic' >Making all in . >make[3]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/generic' >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o nosh.lo nosh.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c nosh.c -fPIC -DPIC -o .libs/nosh.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o mgparm.lo mgparm.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c mgparm.c -fPIC -DPIC -o .libs/mgparm.o >mgparm.c: In function 'MGparm_parseCHGM': >mgparm.c:448:5: warning: format '%d' expects type 'int *', but argument 3 has type 'enum Vchrg_Meth *' >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o femparm.lo femparm.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c femparm.c -fPIC -DPIC -o .libs/femparm.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o pbeparm.lo pbeparm.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c pbeparm.c -fPIC -DPIC -o .libs/pbeparm.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o apolparm.lo apolparm.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c apolparm.c -fPIC -DPIC -o .libs/apolparm.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vacc.lo vacc.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vacc.c -fPIC -DPIC -o .libs/vacc.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o valist.lo valist.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c valist.c -fPIC -DPIC -o .libs/valist.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vatom.lo vatom.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vatom.c -fPIC -DPIC -o .libs/vatom.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vgreen.lo vgreen.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vgreen.c -fPIC -DPIC -o .libs/vgreen.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vpbe.lo vpbe.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vpbe.c -fPIC -DPIC -o .libs/vpbe.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vcap.lo vcap.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vcap.c -fPIC -DPIC -o .libs/vcap.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vclist.lo vclist.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vclist.c -fPIC -DPIC -o .libs/vclist.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vstring.lo vstring.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vstring.c -fPIC -DPIC -o .libs/vstring.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vparam.lo vparam.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/fem -I../../src/mg -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vparam.c -fPIC -DPIC -o .libs/vparam.o >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -o libapbsgen.la nosh.lo mgparm.lo femparm.lo pbeparm.lo apolparm.lo vacc.lo valist.lo vatom.lo vgreen.lo vpbe.lo vcap.lo vclist.lo vstring.lo vparam.lo >libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libapbsgen.a .libs/nosh.o .libs/mgparm.o .libs/femparm.o .libs/pbeparm.o .libs/apolparm.o .libs/vacc.o .libs/valist.o .libs/vatom.o .libs/vgreen.o .libs/vpbe.o .libs/vcap.o .libs/vclist.o .libs/vstring.o .libs/vparam.o >libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libapbsgen.a >libtool: link: ( cd ".libs" && rm -f "libapbsgen.la" && ln -s "../libapbsgen.la" "libapbsgen.la" ) >cp -p ../../src/generic/apbs/*.h ../../src/aaa_inc/apbs/. >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/generic' >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/generic' >Making all in mg >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/mg' >Making all in . >make[3]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/mg' >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vpmg.lo vpmg.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vpmg.c -fPIC -DPIC -o .libs/vpmg.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vpmgp.lo vpmgp.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vpmgp.c -fPIC -DPIC -o .libs/vpmgp.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o mypde.lo mypde.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c mypde.f -fPIC -o .libs/mypde.o >/bin/sh ../../libtool --tag=F77 --mode=compile /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o vpmgf.lo vpmgf.f >libtool: compile: /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c vpmgf.f -fPIC -o .libs/vpmgf.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vmgrid.lo vmgrid.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vmgrid.c -fPIC -DPIC -o .libs/vmgrid.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vgrid.lo vgrid.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vgrid.c -fPIC -DPIC -o .libs/vgrid.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vopot.lo vopot.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vopot.c -fPIC -DPIC -o .libs/vopot.o >/bin/sh ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -Wl,-O1 -Wl,--as-needed -o libapbsmg.la vpmg.lo vpmgp.lo mypde.lo vpmgf.lo vmgrid.lo vgrid.lo vopot.lo >libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libapbsmg.a .libs/vpmg.o .libs/vpmgp.o .libs/mypde.o .libs/vpmgf.o .libs/vmgrid.o .libs/vgrid.o .libs/vopot.o >libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libapbsmg.a >libtool: link: ( cd ".libs" && rm -f "libapbsmg.la" && ln -s "../libapbsmg.la" "libapbsmg.la" ) >cp -p ../../src/mg/apbs/*.h ../../src/aaa_inc/apbs/. >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/mg' >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/mg' >Making all in fem >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/fem' >Making all in . >make[3]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/fem' >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vfetk.lo vfetk.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vfetk.c -fPIC -DPIC -o .libs/vfetk.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vcsm.lo vcsm.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vcsm.c -fPIC -DPIC -o .libs/vcsm.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o vpee.lo vpee.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c vpee.c -fPIC -DPIC -o .libs/vpee.o >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o dummy.lo dummy.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c dummy.c -fPIC -DPIC -o .libs/dummy.o >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -o libapbsfem.la vfetk.lo vcsm.lo vpee.lo dummy.lo >libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libapbsfem.a .libs/vfetk.o .libs/vcsm.o .libs/vpee.o .libs/dummy.o >libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libapbsfem.a >libtool: link: ( cd ".libs" && rm -f "libapbsfem.la" && ln -s "../libapbsfem.la" "libapbsfem.la" ) >cp -p ../../src/fem/apbs/*.h ../../src/aaa_inc/apbs/. >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/fem' >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/fem' >Making all in aaa_inc >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc' >make all-recursive >make[3]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc' >Making all in apbs >make[4]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc/apbs' >Making all in . >make[5]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc/apbs' >make[5]: No se hace nada para `all-am'. >make[5]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc/apbs' >make[4]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc/apbs' >Making all in . >make[4]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc' >make[4]: No se hace nada para `all-am'. >make[4]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc' >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc' >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_inc' >Making all in aaa_lib >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib' >Making all in . >make[3]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib' >/bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o apbs_link.lo apbs_link.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I../../src/generic -I../../src/mg -I../../src/fem -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c apbs_link.c -fPIC -DPIC -o .libs/apbs_link.o >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -version-info 1:3 -Wl,-O1 -Wl,--as-needed -o libapbs.la -rpath /usr/lib64 apbs_link.lo ../../src/generic/libapbsgen.la ../../src/fem/libapbsfem.la ../../src/mg/libapbsmg.la ../../contrib/pmgZ/libapbspmgz.la ../../contrib/aqua/libapbsaqua.la -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -lz >libtool: link: /usr/bin/mpicc -shared -fPIC -DPIC .libs/apbs_link.o -Wl,--whole-archive ../../src/generic/.libs/libapbsgen.a ../../src/fem/.libs/libapbsfem.a ../../src/mg/.libs/libapbsmg.a ../../contrib/pmgZ/.libs/libapbspmgz.a ../../contrib/aqua/.libs/libapbsaqua.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/usr/lib64/ -Wl,-rpath -Wl,/usr/lib64/ -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. /usr/lib64/libmpi_f77.so /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /usr/lib64//libmaloc.so -lreadline -lm -lz -march=core2 -mtune=core2 -O2 -msse4.1 -Wl,-O1 -Wl,--as-needed -pthread -Wl,-soname -Wl,libapbs.so.1 -o .libs/libapbs.so.1.0.3 >libtool: link: (cd ".libs" && rm -f "libapbs.so.1" && ln -s "libapbs.so.1.0.3" "libapbs.so.1") >libtool: link: (cd ".libs" && rm -f "libapbs.so" && ln -s "libapbs.so.1.0.3" "libapbs.so") >libtool: link: ( cd ".libs" && rm -f "libapbs.la" && ln -s "../libapbs.la" "libapbs.la" ) >make[3]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib' >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib' >Making all in . >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src' >make[2]: No se hace nada para `all-am'. >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src' >make[1]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src' >Making all in bin >make[1]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin' >rm -f apbs >make all-am >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin' >/bin/sh ../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c -o routines.lo routines.c >libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c routines.c -fPIC -DPIC -o .libs/routines.o >/bin/sh ../libtool --tag=CC --mode=link /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -version-info 1:3 -Wl,-O1 -Wl,--as-needed -o libapbsmainroutines.la -rpath /usr/lib64 routines.lo ../src/aaa_lib/.libs/libapbs.la >libtool: link: warning: `/usr/lib64/libmaloc.la' seems to be moved >libtool: link: /usr/bin/mpicc -shared -fPIC -DPIC .libs/routines.o -Wl,-rpath -Wl,/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs -Wl,-rpath -Wl,/usr/lib64/ -Wl,-rpath -Wl,/usr/lib64/ -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. ../src/aaa_lib/.libs/libapbs.so -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /usr/lib64/libmpi_f77.so /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -lmkl_rt -lpthread /usr/lib64//libmaloc.so -lreadline -lm -lz -O2 -march=core2 -mtune=core2 -O2 -msse4.1 -Wl,-O1 -Wl,--as-needed -pthread -Wl,-soname -Wl,libapbsmainroutines.so.1 -o .libs/libapbsmainroutines.so.1.0.3 >libtool: link: (cd ".libs" && rm -f "libapbsmainroutines.so.1" && ln -s "libapbsmainroutines.so.1.0.3" "libapbsmainroutines.so.1") >libtool: link: (cd ".libs" && rm -f "libapbsmainroutines.so" && ln -s "libapbsmainroutines.so.1.0.3" "libapbsmainroutines.so") >libtool: link: ( cd ".libs" && rm -f "libapbsmainroutines.la" && ln -s "../libapbsmainroutines.la" "libapbsmainroutines.la" ) >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c main.c >/bin/sh ../libtool --tag=CC --mode=link /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -Wl,-O1 -Wl,--as-needed -o apbs main.o /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz .libs/libapbsmainroutines.la >libtool: link: /usr/bin/mpif77 -O2 -pipe -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -O2 -pipe -Wl,-O1 -Wl,--as-needed -o .libs/apbs main.o -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -L/usr/lib .libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64/libmpi_f77.so /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -lmkl_rt -lpthread /usr/lib64//libmaloc.so -lreadline -lm -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin' >make[1]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin' >Making all in tools >make[1]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools' >Making all in mesh >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools/mesh' >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c mgmesh.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz -Wl,-O1 -Wl,--as-needed -o mgmesh mgmesh.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -o .libs/mgmesh mgmesh.o -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -L/usr/lib ../../src/aaa_lib/.libs/libapbs.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c dxmath.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o dxmath dxmath.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/dxmath dxmath.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c mergedx.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz -Wl,-O1 -Wl,--as-needed -o mergedx mergedx.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -o .libs/mergedx mergedx.o -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -L/usr/lib ../../src/aaa_lib/.libs/libapbs.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c mergedx2.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz -Wl,-O1 -Wl,--as-needed -o mergedx2 mergedx2.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la 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-lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -Wl,-O1 -Wl,--as-needed -o uhbd_asc2bin uhbd_asc2bin.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpif77 -O2 -pipe -Wl,-O1 -Wl,--as-needed -O2 -pipe -Wl,-O1 -Wl,--as-needed -o .libs/uhbd_asc2bin 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-I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c smooth.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz -Wl,-O1 -Wl,--as-needed -o smooth smooth.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -o .libs/smooth smooth.o -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -L/usr/lib ../../src/aaa_lib/.libs/libapbs.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c value.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o value value.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 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-L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c dx2uhbd.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o dx2uhbd dx2uhbd.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib 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/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/benchmark benchmark.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c similarity.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o similarity similarity.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/similarity similarity.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c analysis.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o analysis analysis.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/analysis analysis.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c multivalue.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o multivalue multivalue.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/multivalue multivalue.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c del2dx.c >del2dx.c: En la función âmainâ: >del2dx.c:54:7: aviso: se descarta el valor de devolución de âfreadâ, se declaró con el atributo warn_unused_result >del2dx.c:67:7: aviso: se descarta el valor de devolución de âfreadâ, se declaró con el atributo warn_unused_result >del2dx.c:75:7: aviso: se descarta el valor de devolución de âfreadâ, se declaró con el atributo warn_unused_result >del2dx.c:81:7: aviso: se descarta el valor de devolución de âfreadâ, se declaró con el atributo warn_unused_result >del2dx.c:84:7: aviso: se descarta el valor de devolución de âfreadâ, se declaró con el atributo warn_unused_result >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o del2dx del2dx.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/del2dx del2dx.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c tensor2dx.c >tensor2dx.c: En la función âmainâ: >tensor2dx.c:75:8: aviso: se descarta el valor de devolución de âfscanfâ, se declaró con el atributo warn_unused_result >tensor2dx.c:76:8: aviso: se descarta el valor de devolución de âfscanfâ, se declaró con el atributo warn_unused_result >tensor2dx.c:114:9: aviso: se descarta el valor de devolución de âfscanfâ, se declaró con el atributo warn_unused_result >tensor2dx.c:115:9: aviso: se descarta el valor de devolución de âfscanfâ, se declaró con el atributo warn_unused_result >tensor2dx.c:116:9: aviso: se descarta el valor de devolución de âfscanfâ, se declaró con el atributo warn_unused_result >tensor2dx.c:117:9: aviso: se descarta el valor de devolución de âfscanfâ, se declaró con el atributo warn_unused_result >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o tensor2dx tensor2dx.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/tensor2dx tensor2dx.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools/mesh' >Making all in manip >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools/manip' >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c coulomb.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o coulomb coulomb.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/coulomb coulomb.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c born.c >/bin/sh ../../libtool --tag=CC --mode=link /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o born born.o ../../src/aaa_lib/libapbs.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpicc -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/born born.o ../../src/aaa_lib/.libs/libapbs.so -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools/manip' >Making all in arpack >make[2]: se ingresa al directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools/arpack' >/usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/aaa_inc -I. -I/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/include -I/usr/include -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -march=core2 -mtune=core2 -O2 -pipe -msse4.1 -fopenmp -c driver.c >/usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o readhb.o readhb.f >/usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -c -o ardriv.o ardriv.f >/bin/sh ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o driver driver.o readhb.o ardriv.o ../../src/aaa_lib/libapbs.la -larpack -L/usr/lib64 /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/libapbsmainroutines.la /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/libapbs.la -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib -lmaloc -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lgfortran -lm -lpthread -L/usr/lib -lmpi -lm -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -lmkl_rt -lpthread -lz >libtool: link: /usr/bin/mpif77 -O2 -pipe -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -o .libs/driver driver.o readhb.o ardriv.o -L/usr/lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/../../.. ../../src/aaa_lib/.libs/libapbs.so -L/opt/intel/composerxe-2013.0.079/mkl/lib/intel64 -L/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/contrib/lib /usr/lib64/libarpack.so -L/opt/intel/composerxe-2013.0.079/mkl/lib/ia32 -lmkl_gf_lp64 -lmkl_sequential -lmkl_core /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/bin/.libs/libapbsmainroutines.so /var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/src/aaa_lib/.libs/libapbs.so /usr/lib64//libmaloc.so -lreadline /usr/lib64/libmpi_f77.so /usr/lib/gcc/x86_64-pc-linux-gnu/4.5.4/libgfortran.so -L/usr/lib /usr/lib64/libmpi.so /usr/lib64/libopen-rte.so /usr/lib64/libopen-pal.so -ldl -lnsl -lutil -lm -lmkl_rt -lpthread -lz -pthread -Wl,-rpath -Wl,/usr/lib64/ >../../src/aaa_lib/.libs/libapbs.so: undefined reference to `GOMP_parallel_start' >../../src/aaa_lib/.libs/libapbs.so: undefined reference to `omp_get_thread_num' >../../src/aaa_lib/.libs/libapbs.so: undefined reference to `GOMP_parallel_end' >../../src/aaa_lib/.libs/libapbs.so: undefined reference to `omp_get_num_threads' >collect2: ld returned 1 exit status >make[2]: *** [driver] Error 1 >make[2]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools/arpack' >make[1]: *** [all-recursive] Error 1 >make[1]: se sale del directorio `/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source/tools' >make: *** [all-recursive] Error 1 > [31;01m*[0m ERROR: sci-chemistry/apbs-1.3-r3 failed (compile phase): > [31;01m*[0m emake failed > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=sci-chemistry/apbs-1.3-r3'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-chemistry/apbs-1.3-r3'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-chemistry/apbs-1.3-r3/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/apbs-1.3-r3/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source' > [31;01m*[0m S: '/var/tmp/portage/sci-chemistry/apbs-1.3-r3/work/apbs-1.3-source'
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