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Gentoo's Bugzilla – Attachment 314457 Details for
Bug 419761
dev-lang/R with sys-devel/gcc-4.7 - R.bin segmentation fault when byte-compiling package 'base'
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build.log
build.log (text/plain), 138.30 KB, created by
Jauhien Piatlicki (RETIRED)
on 2012-06-06 18:44:38 UTC
(
hide
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Description:
build.log
Filename:
MIME Type:
Creator:
Jauhien Piatlicki (RETIRED)
Created:
2012-06-06 18:44:38 UTC
Size:
138.30 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: dev-lang/R-2.15.0 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: calchan@gentoo.org sci-mathematics@gentoo.org >[32;01m * [39;49;00mUSE: X bash-completion cairo elibc_glibc icu java jpeg kernel_linux nls openmp perl png readline tiff userland_GNU x86 >[32;01m * [39;49;00mFEATURES: preserve-libs sandbox >>>> Unpacking source... >>>> Unpacking R-2.15.0.tar.gz to /var/tmp/portage/dev-lang/R-2.15.0/work >>>> Unpacking R.bash_completion.bz2 to /var/tmp/portage/dev-lang/R-2.15.0/work >>>> Source unpacked in /var/tmp/portage/dev-lang/R-2.15.0/work >>>> Preparing source in /var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0 ... > [32;01m*[0m Applying R-2.11.1-parallel.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.12.1-ldflags.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.13.1-zlib_header_fix.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.14.1-tiff.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.14.1-rmath-shared.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.14.1-warnings-buffer-overflow.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.14.2-library-writability.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying R-2.14.2-prune-package-update.patch ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running aclocal -I m4 ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoconf ... >[A[160C [34;01m[ [32;01mok[34;01m ][0m >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0 ... > * econf: updating R-2.15.0/tools/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating R-2.15.0/tools/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --enable-byte-compiled-packages --enable-R-shlib --with-system-zlib --with-system-bzlib --with-system-pcre --with-system-xz --with-blas=-lblas --docdir=/usr/share/doc/R-2.15.0 rdocdir=/usr/share/doc/R-2.15.0 --enable-nls --enable-openmp --disable-R-profiling --disable-memory-profiling --disable-static --disable-R-static-lib --with-cairo --with-ICU --with-jpeglib --without-lapack --with-recommended-packages --with-libpng --with-readline --with-libtiff --without-tcltk --with-x >checking build system type... i686-pc-linux-gnu >checking host system type... i686-pc-linux-gnu >loading site script './config.site' >loading build-specific script './config.site' >checking for pwd... /bin/pwd >checking whether builddir is srcdir... yes >checking for working aclocal... found >checking for working autoconf... found >checking for working automake... found >checking for working autoheader... found >checking for gawk... gawk >checking whether ln -s works... yes >checking for bison... bison -y >checking for ar... ar >checking for a BSD-compatible install... /usr/bin/install -c >checking for sed... /bin/sed >checking for which... /usr/bin/which >checking for less... /usr/bin/less >checking for gtar... no >checking for gnutar... no >checking for tar... /bin/tar >checking for tex... /usr/bin/tex >checking for pdftex... /usr/bin/pdftex >checking for pdflatex... /usr/bin/pdflatex >checking for makeindex... /usr/bin/makeindex >checking for makeinfo... /usr/bin/makeinfo >checking whether makeinfo version is at least 4.7... yes >checking for ginstall-info... no >checking for install-info... /usr/bin/install-info >checking for texi2dvi... /usr/bin/texi2dvi >checking for kpsewhich... /usr/bin/kpsewhich >checking for unzip... /usr/bin/unzip >checking for zip... /usr/bin/zip >checking for gzip... /bin/gzip >checking for bzip2... /bin/bzip2 >using default browser ... /usr/bin/xdg-open >checking for /usr/bin/xdg-open... /usr/bin/xdg-open >checking for notangle... false >checking for pkg-config... /usr/bin/pkg-config >checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc >checking whether the C compiler works... yes >checking for C compiler default output file name... a.out >checking for suffix of executables... >checking whether we are cross compiling... no >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether i686-pc-linux-gnu-gcc accepts -g... yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking whether i686-pc-linux-gnu-gcc needs -traditional... no >checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E >defining F77 to be i686-pc-linux-gnu-gfortran >checking for i686-pc-linux-gnu-g77... i686-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether i686-pc-linux-gnu-gfortran accepts -g... yes >checking for i686-pc-linux-gnu-g++... i686-pc-linux-gnu-g++ >checking whether we are using the GNU C++ compiler... yes >checking whether i686-pc-linux-gnu-g++ accepts -g... yes >checking how to run the C++ preprocessor... i686-pc-linux-gnu-g++ -E >checking whether __attribute__((visibility())) is supported... yes >checking whether i686-pc-linux-gnu-gcc accepts -fvisibility... yes >checking whether i686-pc-linux-gnu-gfortran accepts -fvisibility... yes >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking minix/config.h usability... no >checking minix/config.h presence... no >checking for minix/config.h... no >checking whether it is safe to define __EXTENSIONS__... yes >checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc >checking whether we are using the GNU Objective C compiler... no >checking whether i686-pc-linux-gnu-gcc accepts -g... no >checking for Objective C++ compiler... trying some possibilities >checking whether i686-pc-linux-gnu-g++ can compile ObjC++... no >no working compiler found >checking for a sed that does not truncate output... (cached) /bin/sed >checking for fgrep... /bin/grep -F >checking for ld used by i686-pc-linux-gnu-gcc... /usr/i686-pc-linux-gnu/bin/ld >checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B >checking the name lister (/usr/bin/nm -B) interface... BSD nm >checking the maximum length of command line arguments... 1572864 >checking whether the shell understands some XSI constructs... yes >checking whether the shell understands "+="... yes >checking for /usr/i686-pc-linux-gnu/bin/ld option to reload object files... -r >checking for i686-pc-linux-gnu-objdump... i686-pc-linux-gnu-objdump >checking how to recognize dependent libraries... pass_all >checking for i686-pc-linux-gnu-ar... (cached) ar >checking for i686-pc-linux-gnu-strip... i686-pc-linux-gnu-strip >checking for i686-pc-linux-gnu-ranlib... i686-pc-linux-gnu-ranlib >checking command to parse /usr/bin/nm -B output from i686-pc-linux-gnu-gcc object... ok >checking for dlfcn.h... yes >checking whether we are using the GNU C++ compiler... (cached) yes >checking whether i686-pc-linux-gnu-g++ accepts -g... (cached) yes >checking how to run the C++ preprocessor... i686-pc-linux-gnu-g++ -E >checking for i686-pc-linux-gnu-g77... (cached) i686-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... (cached) yes >checking whether i686-pc-linux-gnu-gfortran accepts -g... (cached) yes >checking for objdir... .libs >checking if i686-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no >checking for i686-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC >checking if i686-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes >checking if i686-pc-linux-gnu-gcc static flag -static works... yes >checking if i686-pc-linux-gnu-gcc supports -c -o file.o... yes >checking if i686-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes >checking whether the i686-pc-linux-gnu-gcc linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for ld used by i686-pc-linux-gnu-g++... /usr/i686-pc-linux-gnu/bin/ld >checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes >checking whether the i686-pc-linux-gnu-g++ linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking for i686-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC >checking if i686-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes >checking if i686-pc-linux-gnu-g++ static flag -static works... yes >checking if i686-pc-linux-gnu-g++ supports -c -o file.o... yes >checking if i686-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes >checking whether the i686-pc-linux-gnu-g++ linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for i686-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if i686-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if i686-pc-linux-gnu-gfortran static flag -static works... yes >checking if i686-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking if i686-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes >checking whether the i686-pc-linux-gnu-gfortran linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking for cos in -lm... yes >checking for sin in -lm... yes >checking for dlopen in -ldl... yes >checking readline/history.h usability... yes >checking readline/history.h presence... yes >checking for readline/history.h... yes >checking readline/readline.h usability... yes >checking readline/readline.h presence... yes >checking for readline/readline.h... yes >checking for rl_callback_read_char in -lreadline... yes >checking for history_truncate_file... yes >checking whether rl_completion_matches exists and is declared... yes >checking for ANSI C header files... (cached) yes >checking for dirent.h that defines DIR... yes >checking for library containing opendir... none required >checking for sys/wait.h that is POSIX.1 compatible... yes >checking arpa/inet.h usability... yes >checking arpa/inet.h presence... yes >checking for arpa/inet.h... yes >checking dl.h usability... no >checking dl.h presence... no >checking for dl.h... no >checking for dlfcn.h... (cached) yes >checking elf.h usability... yes >checking elf.h presence... yes >checking for elf.h... yes >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking floatingpoint.h usability... no >checking floatingpoint.h presence... no >checking for floatingpoint.h... no >checking fpu_control.h usability... yes >checking fpu_control.h presence... yes >checking for fpu_control.h... yes >checking glob.h usability... yes >checking glob.h presence... yes >checking for glob.h... yes >checking grp.h usability... yes >checking grp.h presence... yes >checking for grp.h... yes >checking netdb.h usability... yes >checking netdb.h presence... yes >checking for netdb.h... yes >checking netinet/in.h usability... yes >checking netinet/in.h presence... yes >checking for netinet/in.h... yes >checking pwd.h usability... yes >checking pwd.h presence... yes >checking for pwd.h... yes >checking for strings.h... (cached) yes >checking sys/param.h usability... yes >checking sys/param.h presence... yes >checking for sys/param.h... yes >checking sys/resource.h usability... yes >checking sys/resource.h presence... yes >checking for sys/resource.h... yes >checking sys/select.h usability... yes >checking sys/select.h presence... yes >checking for sys/select.h... yes >checking sys/socket.h usability... yes >checking sys/socket.h presence... yes >checking for sys/socket.h... yes >checking for sys/stat.h... (cached) yes >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking sys/times.h usability... yes >checking sys/times.h presence... yes >checking for sys/times.h... yes >checking sys/utsname.h usability... yes >checking sys/utsname.h presence... yes >checking for sys/utsname.h... yes >checking for unistd.h... (cached) yes >checking utime.h usability... yes >checking utime.h presence... yes >checking for utime.h... yes >checking errno.h usability... yes >checking errno.h presence... yes >checking for errno.h... yes >checking for inttypes.h... (cached) yes >checking limits.h usability... yes >checking limits.h presence... yes >checking for limits.h... yes >checking locale.h usability... yes >checking locale.h presence... yes >checking for locale.h... yes >checking stdarg.h usability... yes >checking stdarg.h presence... yes >checking for stdarg.h... yes >checking stdbool.h usability... yes >checking stdbool.h presence... yes >checking for stdbool.h... yes >checking for stdint.h... (cached) yes >checking for string.h... (cached) yes >checking whether setjmp.h is POSIX.1 compatible... yes >checking whether sigsetjmp is declared... yes >checking whether siglongjmp is declared... yes >checking for GNU C library with version >= 2... yes >checking return type of signal handlers... void >checking for uint64_t... yes >checking for pid_t... yes >checking for size_t... yes >checking whether SIZE_MAX is declared... yes >checking for blkcnt_t... yes >checking for type of socket length... socklen_t * >checking for stack_t... yes >checking for intptr_t... yes >checking for uintptr_t... yes >checking whether byte ordering is bigendian... no >checking for an ANSI C-conforming const... yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C99... -std=gnu99 >checking for i686-pc-linux-gnu-gcc -std=gnu99 option to accept ISO Standard C... (cached) -std=gnu99 >checking for inline... inline >checking size of int... 4 >checking size of long... 4 >checking size of long long... 8 >checking size of double... 8 >checking size of long double... 12 >checking size of size_t... 4 >checking whether we can compute C Make dependencies... yes, using i686-pc-linux-gnu-gcc -std=gnu99 -MM >checking whether i686-pc-linux-gnu-gcc -std=gnu99 supports -c -o FILE.lo... yes >checking for i686-pc-linux-gnu-gcc -std=gnu99 option to support OpenMP... -fopenmp >checking how to get verbose linking output from i686-pc-linux-gnu-gfortran... -v >checking for Fortran 77 libraries of i686-pc-linux-gnu-gfortran... -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0 -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../../../i686-pc-linux-gnu/lib/../lib -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../../../i686-pc-linux-gnu/lib -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../.. -lgfortran -lm -lquadmath >checking how to get verbose linking output from i686-pc-linux-gnu-gcc -std=gnu99... -v >checking for C libraries of i686-pc-linux-gnu-gcc -std=gnu99... -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0 -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../../../i686-pc-linux-gnu/lib/../lib -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../../../i686-pc-linux-gnu/lib -L/usr/lib/gcc/i686-pc-linux-gnu/4.7.0/../../.. -lgcc_s >checking for dummy main to link with Fortran 77 libraries... none >checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore >checking whether i686-pc-linux-gnu-gfortran appends underscores to external names... yes >checking whether i686-pc-linux-gnu-gfortran appends extra underscores to external names... no >checking whether mixed C/Fortran code can be run... yes >checking whether i686-pc-linux-gnu-gfortran and i686-pc-linux-gnu-gcc -std=gnu99 agree on int and double... yes >checking whether i686-pc-linux-gnu-gfortran and i686-pc-linux-gnu-gcc -std=gnu99 agree on double complex... yes >checking for i686-pc-linux-gnu-gfortran option to support OpenMP... -fopenmp >checking whether i686-pc-linux-gnu-g++ accepts -M for generating dependencies... yes >checking for i686-pc-linux-gnu-g++ option to support OpenMP... -fopenmp >checking whether we can compute ObjC Make dependencies... no >checking for ObjC runtime library... none >checking whether i686-pc-linux-gnu-gcc accepts -fobjc-exceptions... no >checking whether C runtime needs -D__NO_MATH_INLINES... no >checking for xmkmf... no >checking for off_t... yes >checking for working alloca.h... yes >checking for alloca... yes >checking whether alloca is declared... yes >checking whether expm1 exists and is declared... yes >checking whether hypot exists and is declared... yes >checking whether log1p exists and is declared... yes >checking whether log2 exists and is declared... yes >checking whether log10 exists and is declared... yes >checking whether nearbyint exists and is declared... yes >checking whether nearbyintl exists and is declared... yes >checking whether powl exists and is declared... yes >checking whether rint exists and is declared... yes >checking whether rintl exists and is declared... yes >checking whether va_copy exists and is declared... yes >checking for isblank... yes >checking for fseeko... yes >checking for ftello... yes >checking for matherr... yes >checking whether fcntl exists and is declared... yes >checking whether getgrgid exists and is declared... yes >checking whether getpwuid exists and is declared... yes >checking whether kill exists and is declared... yes >checking whether sigaction exists and is declared... yes >checking whether sigaltstack exists and is declared... yes >checking whether sigemptyset exists and is declared... yes >checking whether fdopen exists and is declared... yes >checking whether popen exists and is declared... yes >checking whether setenv exists and is declared... yes >checking whether unsetenv exists and is declared... yes >checking whether getrlimit exists and is declared... yes >checking whether getrusage exists and is declared... yes >checking whether getpriority exists and is declared... yes >checking whether chmod exists and is declared... yes >checking whether mkfifo exists and is declared... yes >checking whether stat exists and is declared... yes >checking whether umask exists and is declared... yes >checking whether gettimeofday exists and is declared... yes >checking whether utimes exists and is declared... yes >checking whether times exists and is declared... yes >checking whether access exists and is declared... yes >checking whether chdir exists and is declared... yes >checking whether execv exists and is declared... yes >checking whether ftruncate exists and is declared... yes >checking whether getcwd exists and is declared... yes >checking whether geteuid exists and is declared... yes >checking whether getuid exists and is declared... yes >checking whether link exists and is declared... yes >checking whether readlink exists and is declared... yes >checking whether symlink exists and is declared... yes >checking whether sysconf exists and is declared... yes >checking whether utime exists and is declared... yes >checking whether clock_gettime exists and is declared... yes >checking whether timespec_get exists and is declared... no >checking for clock_gettime in -lrt... yes >checking for putenv... yes >checking whether putenv is declared... yes >checking for vasprintf... yes >checking whether vasprintf is declared... yes >checking for mempcpy... yes >checking for realpath... yes >checking whether realpath is declared... yes >checking whether glob exists and is declared... yes >checking for isnan... yes >checking whether isfinite is declared... yes >checking whether isnan is declared... yes >checking whether you have IEEE 754 floating-point arithmetic... yes >checking whether putenv("FOO") can unset an environment variable... yes >checking whether putenv("FOO=") can unset an environment variable... no >checking for nl_langinfo and CODESET... yes >checking for mkdtemp... yes >checking for strdup... yes >checking for strncasecmp... yes >checking whether mkdtemp is declared... yes >checking whether strdup is declared... yes >checking whether strncasecmp is declared... yes >checking for library containing connect... none required >checking for library containing gethostbyname... none required >checking for library containing xdr_string... none required >checking for __setfpucw... no >checking for working calloc... yes >checking for working isfinite... yes >checking for working log1p... yes >checking whether ftell works correctly on files opened for append... yes >checking for working sigaction... yes >checking whether mktime sets errno... no >checking whether C99 double complex is supported... >checking complex.h usability... yes >checking complex.h presence... yes >checking for complex.h... yes >checking for double complex... yes >yes >checking whether cabs exists and is declared... yes >checking whether carg exists and is declared... yes >checking whether cexp exists and is declared... yes >checking whether clog exists and is declared... yes >checking whether csqrt exists and is declared... yes >checking whether cpow exists and is declared... yes >checking whether ccos exists and is declared... yes >checking whether csin exists and is declared... yes >checking whether ctan exists and is declared... yes >checking whether cacos exists and is declared... yes >checking whether casin exists and is declared... yes >checking whether catan exists and is declared... yes >checking whether ccosh exists and is declared... yes >checking whether csinh exists and is declared... yes >checking whether ctanh exists and is declared... yes >checking for cblas_cdotu_sub in vecLib framework... no >checking for dgemm_ in -lblas ... yes >checking whether double complex BLAS can be used... yes >checking whether the BLAS is complete... yes >checking iconv.h usability... yes >checking iconv.h presence... yes >checking for iconv.h... yes >checking for iconv... yes >checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes >checking for iconvlist... no >checking for iconv... yes >checking for iconv declaration... > extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); >checking wchar.h usability... yes >checking wchar.h presence... yes >checking for wchar.h... yes >checking wctype.h usability... yes >checking wctype.h presence... yes >checking for wctype.h... yes >checking whether mbrtowc exists and is declared... yes >checking whether wcrtomb exists and is declared... yes >checking whether wcscoll exists and is declared... yes >checking whether wcsftime exists and is declared... yes >checking whether wcstod exists and is declared... yes >checking whether mbstowcs exists and is declared... yes >checking whether wcstombs exists and is declared... yes >checking whether wctrans exists and is declared... yes >checking whether iswblank exists and is declared... yes >checking whether wctype exists and is declared... yes >checking whether iswctype exists and is declared... yes >checking for wctrans_t... yes >checking for mbstate_t... yes >checking for ICU... yes >checking for X... libraries , headers >checking for gethostbyname... yes >checking for connect... yes >checking for remove... yes >checking for shmat... yes >checking for IceConnectionNumber in -lICE... yes >checking X11/Intrinsic.h usability... yes >checking X11/Intrinsic.h presence... yes >checking for X11/Intrinsic.h... yes >checking for XtToolkitInitialize in -lXt... yes >using X11 ... yes >checking for KeySym... yes >checking X11/Xmu/Atoms.h usability... yes >checking X11/Xmu/Atoms.h presence... yes >checking for X11/Xmu/Atoms.h... yes >checking for XmuInternAtom in -lXmu... yes >checking whether pkg-config knows about cairo and pango... yes >checking whether cairo including pango is >= 1.2 and works... yes >checking for BSD networking... yes >checking if jpeglib version >= 6b... yes >checking for jpeg_destroy_compress in -ljpeg... yes >checking for main in -lz... yes >checking if libpng version >= 1.2.7... yes >checking for png_create_write_struct in -lpng... yes >checking tiffio.h usability... yes >checking tiffio.h presence... yes >checking for tiffio.h... yes >checking for TIFFOpen in -ltiff... yes >checking for XDR support... checking rpc/types.h usability... yes >checking rpc/types.h presence... yes >checking for rpc/types.h... yes >checking for rpc/xdr.h... yes >yes >checking for inflateInit2_ in -lz... yes >checking zlib.h usability... yes >checking zlib.h presence... yes >checking for zlib.h... yes >checking if zlib version >= 1.2.3... yes >checking whether zlib support needs to be compiled... no >checking for BZ2_bzlibVersion in -lbz2... yes 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(cached) yes >checking for stdlib.h... (cached) yes >checking for unistd.h... (cached) yes >checking for sys/param.h... (cached) yes >checking for struct stat.st_atim.tv_nsec... yes >checking whether struct stat.st_atim is of type struct timespec... yes >checking for special C compiler options needed for large files... no >checking for _FILE_OFFSET_BITS value needed for large files... 64 >checking for _LARGEFILE_SOURCE value needed for large files... no >checking whether KERN_USRSTACK sysctl is supported... no >checking for visible __lib_stack_end... yes >checking for lpr... lpr >checking for paperconf... /usr/bin/paperconf >checking for java... /usr/bin/java >checking for javac... /usr/bin/javac >checking for javah... /usr/bin/javah >checking for jar... /usr/bin/jar >checking whether Java compiler works... yes >checking whether Java compiler works for version 1.4... yes >checking whether Java interpreter works... yes >checking Java environment... /opt/sun-jdk-1.6.0.29/jre >checking for cached Java settings... no >checking whether JNI programs can be compiled... yes >checking for i686-pc-linux-gnu-gfortran... i686-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... yes >checking whether i686-pc-linux-gnu-gfortran accepts -g... yes >checking for i686-pc-linux-gnu-gfortran... (cached) i686-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... (cached) yes >checking whether i686-pc-linux-gnu-gfortran accepts -g... (cached) yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for i686-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if i686-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if i686-pc-linux-gnu-gfortran static flag -static works... no >checking if i686-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking if i686-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes >checking whether the i686-pc-linux-gnu-gfortran linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking for Fortran flag to compile .f90 files... none >checking for Fortran flag to compile .f95 files... none >checking for i686-pc-linux-gnu-gfortran option to support OpenMP... -fopenmp >checking for recommended packages... yes >checking whether NLS is requested... yes > >Configuring src/extra/intl directory >checking whether make sets $(MAKE)... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking for msgfmt... /usr/bin/msgfmt >checking for gmsgfmt... /usr/bin/gmsgfmt >checking for xgettext... /usr/bin/xgettext >checking for msgmerge... /usr/bin/msgmerge >checking whether we are using the GNU C Library 2 or newer... yes >checking for i686-pc-linux-gnu-ranlib... (cached) i686-pc-linux-gnu-ranlib >checking for simple visibility declarations... yes >checking for stdint.h... yes >checking for getpagesize... yes >checking for working mmap... yes >checking whether integer division by zero raises SIGFPE... yes >checking for inttypes.h... yes >checking for unsigned long long int... yes >checking for inttypes.h... (cached) yes >checking whether the inttypes.h PRIxNN macros are broken... no >checking whether imported symbols can be declared weak... yes >checking for multithread API to use... none >checking argz.h usability... yes >checking argz.h presence... yes >checking for argz.h... yes >checking for inttypes.h... (cached) yes >checking for limits.h... (cached) yes >checking for unistd.h... (cached) yes >checking for sys/param.h... (cached) yes >checking for getcwd... yes >checking for getegid... yes >checking for geteuid... yes >checking for getgid... yes >checking for getuid... yes >checking for mempcpy... (cached) yes >checking for munmap... yes >checking for stpcpy... yes >checking for strcasecmp... yes >checking for strdup... (cached) yes >checking for strtoul... yes >checking for tsearch... yes >checking for argz_count... yes >checking for argz_stringify... yes >checking for argz_next... yes >checking for __fsetlocking... yes >checking whether feof_unlocked is declared... yes >checking whether fgets_unlocked is declared... yes >checking for iconv... (cached) yes >checking for iconv declaration... (cached) > extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); >checking for NL_LOCALE_NAME macro... yes >checking for bison... bison >checking version of bison... 2.4.3, ok >checking for long long int... yes >checking for long double... yes >checking for wchar_t... yes >checking for wint_t... yes >checking for intmax_t... yes >checking whether printf() supports POSIX/XSI format strings... yes >checking whether we are using the GNU C Library 2.1 or newer... yes >checking for stdint.h... (cached) yes >checking for SIZE_MAX... yes >checking for stdint.h... (cached) yes >checking for CFPreferencesCopyAppValue... no >checking for CFLocaleCopyCurrent... no >checking for ptrdiff_t... yes >checking stddef.h usability... yes >checking stddef.h presence... yes >checking for stddef.h... yes >checking for stdlib.h... (cached) yes >checking for string.h... (cached) yes >checking for asprintf... yes >checking for fwprintf... yes >checking for putenv... (cached) yes >checking for setenv... yes >checking for setlocale... yes >checking for snprintf... yes >checking for wcslen... yes >checking whether _snprintf is declared... no >checking whether _snwprintf is declared... no >checking whether getc_unlocked is declared... yes >checking for nl_langinfo and CODESET... (cached) yes >checking for LC_MESSAGES... yes >checking for shared library run path origin... done >checking for CFPreferencesCopyAppValue... (cached) no >checking for CFLocaleCopyCurrent... (cached) no >checking whether included gettext is requested... no >checking for GNU gettext in libc... yes >checking whether to use NLS... yes >checking where the gettext function comes from... libc >Finished configuring src/extra/intl directory > >using as R_SHELL for scripts ... /bin/sh >configure: creating ./config.status >config.status: creating Makeconf >config.status: creating Makefile >config.status: creating doc/Makefile >config.status: creating doc/html/Makefile >config.status: creating doc/manual/Makefile >config.status: creating etc/Makefile >config.status: creating etc/Makeconf >config.status: creating etc/Renviron >config.status: creating etc/ldpaths >config.status: creating m4/Makefile >config.status: creating po/Makefile.in >config.status: creating share/Makefile >config.status: creating src/Makefile >config.status: creating src/appl/Makefile >config.status: creating src/extra/Makefile >config.status: creating src/extra/blas/Makefile >config.status: creating src/extra/bzip2/Makefile >config.status: creating src/extra/intl/Makefile >config.status: creating src/extra/pcre/Makefile >config.status: creating src/extra/tre/Makefile >config.status: creating src/extra/xdr/Makefile >config.status: creating src/extra/xz/Makefile >config.status: creating src/extra/zlib/Makefile >config.status: creating src/include/Makefile >config.status: creating src/include/Rmath.h0 >config.status: creating src/include/R_ext/Makefile >config.status: creating src/library/Recommended/Makefile >config.status: creating src/library/Makefile >config.status: creating src/library/base/DESCRIPTION >config.status: creating src/library/base/Makefile >config.status: creating src/library/compiler/DESCRIPTION >config.status: creating src/library/compiler/Makefile >config.status: creating src/library/datasets/DESCRIPTION >config.status: creating src/library/datasets/Makefile >config.status: creating src/library/graphics/DESCRIPTION >config.status: creating src/library/graphics/Makefile >config.status: creating src/library/grDevices/DESCRIPTION >config.status: creating src/library/grDevices/Makefile >config.status: creating src/library/grDevices/src/Makefile >config.status: creating src/library/grDevices/src/cairo/Makefile >config.status: creating src/library/grid/DESCRIPTION >config.status: creating src/library/grid/Makefile >config.status: creating src/library/grid/src/Makefile >config.status: creating src/library/methods/DESCRIPTION >config.status: creating src/library/methods/Makefile >config.status: creating src/library/methods/src/Makefile >config.status: creating src/library/parallel/DESCRIPTION >config.status: creating src/library/parallel/Makefile >config.status: creating src/library/parallel/src/Makefile >config.status: creating src/library/profile/Makefile >config.status: creating src/library/stats/DESCRIPTION >config.status: creating src/library/stats/Makefile >config.status: creating src/library/stats/src/Makefile >config.status: creating src/library/stats4/DESCRIPTION >config.status: creating src/library/stats4/Makefile >config.status: creating src/library/splines/DESCRIPTION >config.status: creating src/library/splines/Makefile >config.status: creating src/library/splines/src/Makefile >config.status: creating src/library/tcltk/DESCRIPTION >config.status: creating src/library/tcltk/Makefile >config.status: creating src/library/tcltk/src/Makefile >config.status: creating src/library/tools/DESCRIPTION >config.status: creating src/library/tools/Makefile >config.status: creating src/library/tools/src/Makefile >config.status: creating src/library/utils/DESCRIPTION >config.status: creating src/library/utils/Makefile >config.status: creating src/main/Makefile >config.status: creating src/modules/Makefile >config.status: creating src/modules/X11/Makefile >config.status: creating src/modules/internet/Makefile >config.status: creating src/modules/lapack/Makefile >config.status: creating src/modules/vfonts/Makefile >config.status: creating src/nmath/Makefile >config.status: creating src/nmath/standalone/Makefile >config.status: creating src/scripts/Makefile >config.status: creating src/scripts/R.sh >config.status: creating src/scripts/Rcmd >config.status: creating src/scripts/f77_f2c >config.status: creating src/scripts/mkinstalldirs >config.status: creating src/scripts/pager >config.status: creating src/unix/Makefile >config.status: creating tests/Makefile >config.status: creating tests/Embedding/Makefile >config.status: creating tests/Examples/Makefile >config.status: creating tests/Native/Makefile >config.status: creating tools/Makefile >config.status: creating src/include/config.h >config.status: executing libtool commands >config.status: executing po-directories commands >config.status: creating po/POTFILES >config.status: creating po/Makefile >config.status: executing stamp-h commands > >R is now configured for i686-pc-linux-gnu > > Source directory: . > Installation directory: /usr > > C compiler: i686-pc-linux-gnu-gcc -std=gnu99 -O3 -march=native -mtune=native -fomit-frame-pointer -pipe > Fortran 77 compiler: i686-pc-linux-gnu-gfortran > > C++ compiler: i686-pc-linux-gnu-g++ -O3 -march=native -mtune=native -fomit-frame-pointer -pipe > Fortran 90/95 compiler: i686-pc-linux-gnu-gfortran > Obj-C compiler: i686-pc-linux-gnu-gcc > > Interfaces supported: X11 > External libraries: readline, BLAS(generic), ICU, lzma > Additional capabilities: PNG, JPEG, TIFF, NLS, cairo > Options enabled: shared R library, Java > > Recommended packages: yes > >>>> Source configured. >>>> Compiling source in /var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0 ... >make -j1 >make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/m4' >make[1]: Nothing to be done for `R'. >make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/m4' >make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/tools' >make[1]: Nothing to be done for `R'. >make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/tools' >make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/doc' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/doc/html' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/doc/html' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/doc/manual' >make[2]: Nothing to be done for `R'. >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/doc/manual' >make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/doc' >make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/etc' >make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/etc' >make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/share' >make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/share' >make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/scripts' >creating src/scripts/R.fe >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/scripts' >mkdir -p -- ../../bin >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/scripts' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/scripts' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/include' >mkdir -p -- ../../include >cat: ../../tools/../VERSION-NICK: No such file or directory >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/include/R_ext' >mkdir -p -- ../../../include/R_ext >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/include/R_ext' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/include' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra/tre' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra/tre' >making regcomp.d from regcomp.c >making regerror.d from regerror.c >making regexec.d from regexec.c >making tre-ast.d from tre-ast.c >making tre-compile.d from tre-compile.c >making tre-match-approx.d from tre-match-approx.c >making tre-match-backtrack.d from tre-match-backtrack.c >making tre-match-parallel.d from tre-match-parallel.c >making tre-mem.d from tre-mem.c >making tre-parse.d from tre-parse.c >making tre-stack.d from tre-stack.c >making xmalloc.d from xmalloc.c >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra/tre' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra/tre' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c regcomp.c -o regcomp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c regerror.c -o regerror.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c regexec.c -o regexec.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-ast.c -o tre-ast.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-compile.c -o tre-compile.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-mem.c -o tre-mem.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-parse.c -o tre-parse.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c tre-stack.c -o tre-stack.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c xmalloc.c -o xmalloc.o >rm -f libtre.a >ar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o >i686-pc-linux-gnu-ranlib libtre.a >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra/tre' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra/tre' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/extra' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/appl' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/appl' >making bakslv.d from bakslv.c >making binning.d from binning.c >making cpoly.d from cpoly.c >making cumsum.d from cumsum.c >making fft.d from fft.c >making fmin.d from fmin.c >making integrate.d from integrate.c >making interv.d from interv.c >making lbfgsb.d from lbfgsb.c >making machar.d from machar.c >making maxcol.d from maxcol.c >making pretty.d from pretty.c >making rcont.d from rcont.c >making rowsum.d from rowsum.c >making stem.d from stem.c >making strsignif.d from strsignif.c >making tabulate.d from tabulate.c >making uncmin.d from uncmin.c >making zeroin.d from zeroin.c >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/appl' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/appl' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bakslv.c -o bakslv.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c binning.c -o binning.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c cpoly.c -o cpoly.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c cumsum.c -o cumsum.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fft.c -o fft.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fmin.c -o fmin.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c integrate.c -o integrate.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c interv.c -o interv.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c lbfgsb.c -o lbfgsb.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c machar.c -o machar.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c maxcol.c -o maxcol.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pretty.c -o pretty.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rcont.c -o rcont.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rowsum.c -o rowsum.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c stem.c -o stem.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c strsignif.c -o strsignif.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c tabulate.c -o tabulate.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c uncmin.c -o uncmin.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c zeroin.c -o zeroin.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c ch2inv.f -o ch2inv.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c chol.f -o chol.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dchdc.f -o dchdc.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dpbfa.f -o dpbfa.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dpbsl.f -o dpbsl.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dpoco.f -o dpoco.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dpodi.f -o dpodi.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dpofa.f -o dpofa.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dposl.f -o dposl.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dqrdc.f -o dqrdc.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dqrdc2.f -o dqrdc2.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dqrls.f -o dqrls.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dqrsl.f -o dqrsl.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dqrutl.f -o dqrutl.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dsvdc.f -o dsvdc.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dtrco.f -o dtrco.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dtrsl.f -o dtrsl.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c eigen.f -o eigen.o >rm -f libappl.a >ar cr libappl.a bakslv.o binning.o cpoly.o cumsum.o fft.o fmin.o integrate.o interv.o lbfgsb.o machar.o maxcol.o pretty.o rcont.o rowsum.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o eigen.o >i686-pc-linux-gnu-ranlib libappl.a >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/appl' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/appl' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/nmath' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/nmath' >making mlutils.d from mlutils.c >making d1mach.d from d1mach.c >making i1mach.d from i1mach.c >making fmax2.d from fmax2.c >making fmin2.d from fmin2.c >making fprec.d from fprec.c >making fround.d from fround.c >making ftrunc.d from ftrunc.c >making sign.d from sign.c >making fsign.d from fsign.c >making imax2.d from imax2.c >making imin2.d from imin2.c >making chebyshev.d from chebyshev.c >making log1p.d from log1p.c >making expm1.d from expm1.c >making lgammacor.d from lgammacor.c >making gammalims.d from gammalims.c >making stirlerr.d from stirlerr.c >making bd0.d from bd0.c >making gamma.d from gamma.c >making lgamma.d from lgamma.c >making gamma_cody.d from gamma_cody.c >making beta.d from beta.c >making lbeta.d from lbeta.c >making polygamma.d from polygamma.c >making bessel_i.d from bessel_i.c >making bessel_j.d from bessel_j.c >making bessel_k.d from bessel_k.c >making bessel_y.d from bessel_y.c >making choose.d from choose.c >making snorm.d from snorm.c >making sexp.d from sexp.c >making dgamma.d from dgamma.c >making pgamma.d from pgamma.c >making qgamma.d from qgamma.c >making rgamma.d from rgamma.c >making dbeta.d from dbeta.c >making pbeta.d from pbeta.c >making qbeta.d from qbeta.c >making rbeta.d from rbeta.c >making dunif.d from dunif.c >making punif.d from punif.c >making qunif.d from qunif.c >making runif.d from runif.c >making dnorm.d from dnorm.c >making pnorm.d from pnorm.c >making qnorm.d from qnorm.c >making rnorm.d from rnorm.c >making dlnorm.d from dlnorm.c >making plnorm.d from plnorm.c >making qlnorm.d from qlnorm.c >making rlnorm.d from rlnorm.c >making df.d from df.c >making pf.d from pf.c >making qf.d from qf.c >making rf.d from rf.c >making dnf.d from dnf.c >making dt.d from dt.c >making pt.d from pt.c >making qt.d from qt.c >making rt.d from rt.c >making dnt.d from dnt.c >making dchisq.d from dchisq.c >making pchisq.d from pchisq.c >making qchisq.d from qchisq.c >making rchisq.d from rchisq.c >making rnchisq.d from rnchisq.c >making dbinom.d from dbinom.c >making pbinom.d from pbinom.c >making qbinom.d from qbinom.c >making rbinom.d from rbinom.c >making rmultinom.d from rmultinom.c >making dcauchy.d from dcauchy.c >making pcauchy.d from pcauchy.c >making qcauchy.d from qcauchy.c >making rcauchy.d from rcauchy.c >making dexp.d from dexp.c >making pexp.d from pexp.c >making qexp.d from qexp.c >making rexp.d from rexp.c >making dgeom.d from dgeom.c >making pgeom.d from pgeom.c >making qgeom.d from qgeom.c >making rgeom.d from rgeom.c >making dhyper.d from dhyper.c >making phyper.d from phyper.c >making qhyper.d from qhyper.c >making rhyper.d from rhyper.c >making dnbinom.d from dnbinom.c >making pnbinom.d from pnbinom.c >making qnbinom.d from qnbinom.c >making rnbinom.d from rnbinom.c >making dpois.d from dpois.c >making ppois.d from ppois.c >making qpois.d from qpois.c >making rpois.d from rpois.c >making dweibull.d from dweibull.c >making pweibull.d from pweibull.c >making qweibull.d from qweibull.c >making rweibull.d from rweibull.c >making dlogis.d from dlogis.c >making plogis.d from plogis.c >making qlogis.d from qlogis.c >making rlogis.d from rlogis.c >making dnchisq.d from dnchisq.c >making pnchisq.d from pnchisq.c >making qnchisq.d from qnchisq.c >making dnbeta.d from dnbeta.c >making pnbeta.d from pnbeta.c >making qnbeta.d from qnbeta.c >making pnf.d from pnf.c >making pnt.d from pnt.c >making qnf.d from qnf.c >making qnt.d from qnt.c >making ptukey.d from ptukey.c >making qtukey.d from qtukey.c >making toms708.d from toms708.c >making wilcox.d from wilcox.c >making signrank.d from signrank.c >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/nmath' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/nmath' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c mlutils.c -o mlutils.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c d1mach.c -o d1mach.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c i1mach.c -o i1mach.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fmax2.c -o fmax2.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fmin2.c -o fmin2.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fprec.c -o fprec.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fround.c -o fround.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c ftrunc.c -o ftrunc.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sign.c -o sign.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fsign.c -o fsign.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c imax2.c -o imax2.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c imin2.c -o imin2.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c chebyshev.c -o chebyshev.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c log1p.c -o log1p.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c expm1.c -o expm1.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c lgammacor.c -o lgammacor.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gammalims.c -o gammalims.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c stirlerr.c -o stirlerr.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bd0.c -o bd0.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gamma.c -o gamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c lgamma.c -o lgamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gamma_cody.c -o gamma_cody.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c beta.c -o beta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c lbeta.c -o lbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c polygamma.c -o polygamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bessel_i.c -o bessel_i.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bessel_j.c -o bessel_j.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bessel_k.c -o bessel_k.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bessel_y.c -o bessel_y.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c choose.c -o choose.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c snorm.c -o snorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sexp.c -o sexp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dgamma.c -o dgamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pgamma.c -o pgamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qgamma.c -o qgamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rgamma.c -o rgamma.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dbeta.c -o dbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pbeta.c -o pbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qbeta.c -o qbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rbeta.c -o rbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dunif.c -o dunif.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c punif.c -o punif.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qunif.c -o qunif.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c runif.c -o runif.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dnorm.c -o dnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pnorm.c -o pnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qnorm.c -o qnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rnorm.c -o rnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dlnorm.c -o dlnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c plnorm.c -o plnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qlnorm.c -o qlnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rlnorm.c -o rlnorm.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c df.c -o df.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pf.c -o pf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qf.c -o qf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rf.c -o rf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dnf.c -o dnf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dt.c -o dt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pt.c -o pt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qt.c -o qt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rt.c -o rt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dnt.c -o dnt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dchisq.c -o dchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pchisq.c -o pchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qchisq.c -o qchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rchisq.c -o rchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rnchisq.c -o rnchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dbinom.c -o dbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pbinom.c -o pbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qbinom.c -o qbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rbinom.c -o rbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rmultinom.c -o rmultinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dcauchy.c -o dcauchy.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pcauchy.c -o pcauchy.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qcauchy.c -o qcauchy.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rcauchy.c -o rcauchy.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dexp.c -o dexp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pexp.c -o pexp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qexp.c -o qexp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rexp.c -o rexp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dgeom.c -o dgeom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pgeom.c -o pgeom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qgeom.c -o qgeom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rgeom.c -o rgeom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dhyper.c -o dhyper.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c phyper.c -o phyper.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qhyper.c -o qhyper.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rhyper.c -o rhyper.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dnbinom.c -o dnbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pnbinom.c -o pnbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qnbinom.c -o qnbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rnbinom.c -o rnbinom.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dpois.c -o dpois.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c ppois.c -o ppois.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qpois.c -o qpois.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rpois.c -o rpois.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dweibull.c -o dweibull.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pweibull.c -o pweibull.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qweibull.c -o qweibull.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rweibull.c -o rweibull.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dlogis.c -o dlogis.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c plogis.c -o plogis.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qlogis.c -o qlogis.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rlogis.c -o rlogis.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dnchisq.c -o dnchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pnchisq.c -o pnchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qnchisq.c -o qnchisq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dnbeta.c -o dnbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pnbeta.c -o pnbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qnbeta.c -o qnbeta.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pnf.c -o pnf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c pnt.c -o pnt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qnf.c -o qnf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qnt.c -o qnt.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c ptukey.c -o ptukey.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qtukey.c -o qtukey.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c toms708.c -o toms708.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c wilcox.c -o wilcox.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c signrank.c -o signrank.o >rm -rf libnmath.a >ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o >i686-pc-linux-gnu-ranlib libnmath.a >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/nmath' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/nmath' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >config.status: creating src/unix/Makefile >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >making dynload.d from dynload.c >making edit.d from edit.c >making stubs.d from stubs.c >making system.d from system.c >making sys-unix.d from sys-unix.c >making sys-std.d from sys-std.c >making X11.d from X11.c >making aqua.d from aqua.c >making Rembedded.d from Rembedded.c >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dynload.c -o dynload.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c edit.c -o edit.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c stubs.c -o stubs.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c system.c -o system.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sys-unix.c -o sys-unix.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sys-std.c -o sys-std.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c X11.c -o X11.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c aqua.c -o aqua.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c Rembedded.c -o Rembedded.o >rm -rf libunix.a >ar cr libunix.a dynload.o edit.o stubs.o system.o sys-unix.o sys-std.o X11.o aqua.o Rembedded.o >i686-pc-linux-gnu-ranlib libunix.a >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -Wl,-O1 -Wl,--as-needed -DR_HOME='"/usr/lib/R"' -o Rscript \ > ./Rscript.c >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/unix' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >config.status: creating src/main/Makefile >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >making CConverters.d from CConverters.c >making CommandLineArgs.d from CommandLineArgs.c >making Rdynload.d from Rdynload.c >making Renviron.d from Renviron.c >making RNG.d from RNG.c >making agrep.d from agrep.c >making apply.d from apply.c >making arithmetic.d from arithmetic.c >making array.d from array.c >making attrib.d from attrib.c >making base.d from base.c >making bind.d from bind.c >making builtin.d from builtin.c >making character.d from character.c >making coerce.d from coerce.c >making colors.d from colors.c >making complex.d from complex.c >making connections.d from connections.c >making context.d from context.c >making cov.d from cov.c >making cum.d from cum.c >making dcf.d from dcf.c >making datetime.d from datetime.c >making debug.d from debug.c >making deparse.d from deparse.c >making deriv.d from deriv.c >making devices.d from devices.c >making dotcode.d from dotcode.c >making dounzip.d from dounzip.c >making dstruct.d from dstruct.c >making duplicate.d from duplicate.c >making engine.d from engine.c >making envir.d from envir.c >making errors.d from errors.c >making eval.d from eval.c >making format.d from format.c >making fourier.d from fourier.c >making gevents.d from gevents.c >making gram.d from gram.c >making gram-ex.d from gram-ex.c >making gramLatex.d from gramLatex.c >making gramRd.d from gramRd.c >making graphics.d from graphics.c >making grep.d from grep.c >making identical.d from identical.c >making inlined.d from inlined.c >making inspect.d from inspect.c >making internet.d from internet.c >making iosupport.d from iosupport.c >making lapack.d from lapack.c >making list.d from list.c >making localecharset.d from localecharset.c >making logic.d from logic.c >making main.d from main.c >making mapply.d from mapply.c >making match.d from match.c >making memory.d from memory.c >making model.d from model.c >making names.d from names.c >making objects.d from objects.c >making optim.d from optim.c >making optimize.d from optimize.c >making options.d from options.c >making par.d from par.c >making paste.d from paste.c >making platform.d from platform.c >making plot.d from plot.c >making plot3d.d from plot3d.c >making plotmath.d from plotmath.c >making print.d from print.c >making printarray.d from printarray.c >making printvector.d from printvector.c >making printutils.d from printutils.c >making qsort.d from qsort.c >making random.d from random.c >making raw.d from raw.c >making registration.d from registration.c >making relop.d from relop.c >making rlocale.d from rlocale.c >making saveload.d from saveload.c >making scan.d from scan.c >making seq.d from seq.c >making serialize.d from serialize.c >making size.d from size.c >making sort.d from sort.c >making source.d from source.c >making split.d from split.c >making sprintf.d from sprintf.c >making startup.d from startup.c >making subassign.d from subassign.c >making subscript.d from subscript.c >making subset.d from subset.c >making summary.d from summary.c >making sysutils.d from sysutils.c >making unique.d from unique.c >making util.d from util.c >making version.d from version.c >making vfonts.d from vfonts.c >making Rmain.d from Rmain.c >making alloca.d from alloca.c >making mkdtemp.d from mkdtemp.c >making strdup.d from strdup.c >making strncasecmp.d from strncasecmp.c >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c CConverters.c -o CConverters.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c CommandLineArgs.c -o CommandLineArgs.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c Rdynload.c -o Rdynload.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c Renviron.c -o Renviron.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c RNG.c -o RNG.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c agrep.c -o agrep.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c apply.c -o apply.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c arithmetic.c -o arithmetic.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c array.c -o array.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c attrib.c -o attrib.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c base.c -o base.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c bind.c -o bind.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c builtin.c -o builtin.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c character.c -o character.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c coerce.c -o coerce.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c colors.c -o colors.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c complex.c -o complex.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c connections.c -o connections.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c context.c -o context.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c cov.c -o cov.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c cum.c -o cum.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dcf.c -o dcf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c datetime.c -o datetime.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c debug.c -o debug.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c deparse.c -o deparse.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c deriv.c -o deriv.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c devices.c -o devices.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dotcode.c -o dotcode.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dounzip.c -o dounzip.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dstruct.c -o dstruct.o >dstruct.c: In function 'isDDName': >dstruct.c:127:8: warning: ignoring return value of 'strtol', declared with attribute warn_unused_result [-Wunused-result] >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c duplicate.c -o duplicate.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c engine.c -o engine.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c envir.c -o envir.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c errors.c -o errors.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c eval.c -o eval.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c format.c -o format.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c fourier.c -o fourier.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gevents.c -o gevents.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gram.c -o gram.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gram-ex.c -o gram-ex.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gramLatex.c -o gramLatex.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c gramRd.c -o gramRd.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c graphics.c -o graphics.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c grep.c -o grep.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c identical.c -o identical.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c inlined.c -o inlined.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c inspect.c -o inspect.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c internet.c -o internet.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c iosupport.c -o iosupport.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c lapack.c -o lapack.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c list.c -o list.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c localecharset.c -o localecharset.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c logic.c -o logic.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c main.c -o main.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c mapply.c -o mapply.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c match.c -o match.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c memory.c -o memory.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c model.c -o model.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c names.c -o names.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c objects.c -o objects.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c optim.c -o optim.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c optimize.c -o optimize.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c options.c -o options.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c par.c -o par.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c paste.c -o paste.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c platform.c -o platform.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c plot.c -o plot.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c plot3d.c -o plot3d.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c plotmath.c -o plotmath.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c print.c -o print.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c printarray.c -o printarray.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c printvector.c -o printvector.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c printutils.c -o printutils.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c qsort.c -o qsort.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c random.c -o random.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c raw.c -o raw.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c registration.c -o registration.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c relop.c -o relop.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rlocale.c -o rlocale.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c saveload.c -o saveload.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c scan.c -o scan.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c seq.c -o seq.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c serialize.c -o serialize.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c size.c -o size.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sort.c -o sort.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c source.c -o source.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c split.c -o split.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sprintf.c -o sprintf.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c startup.c -o startup.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c subassign.c -o subassign.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c subscript.c -o subscript.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c subset.c -o subset.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c summary.c -o summary.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c sysutils.c -o sysutils.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c unique.c -o unique.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c util.c -o util.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c version.c -o version.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c vfonts.c -o vfonts.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c xxxpr.f -o xxxpr.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -fopenmp -Wl,-O1 -Wl,--as-needed -o libR.so CConverters.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o base.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cov.o cum.o dcf.o datetime.o debug.o deparse.o deriv.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o engine.o envir.o errors.o eval.o format.o fourier.o gevents.o gram.o gram-ex.o gramLatex.o gramRd.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o model.o names.o objects.o optim.o optimize.o options.o par.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o ../unix/Rembedded.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a ../extra/tre/libtre.a -lblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >mkdir -p -- /var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/bin/exec >mkdir -p -- /var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/lib >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >i686-pc-linux-gnu-gcc -std=gnu99 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c Rmain.c -o Rmain.o >i686-pc-linux-gnu-gcc -std=gnu99 -Wl,--export-dynamic -fopenmp -Wl,-O1 -Wl,--as-needed -o R.bin Rmain.o -L../../lib -lR >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/main' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >making Rhttpd.d from Rhttpd.c >making Rsock.d from Rsock.c >making internet.d from internet.c >making nanoftp.d from nanoftp.c >making nanohttp.d from nanohttp.c >making sock.d from sock.c >making sockconn.d from sockconn.c >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >make[4]: `Makedeps' is up to date. >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c Rsock.c -o Rsock.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c internet.c -o internet.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c nanoftp.c -o nanoftp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c nanohttp.c -o nanohttp.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c sock.c -o sock.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -fvisibility=hidden -c sockconn.c -o sockconn.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -Wl,-O1 -Wl,--as-needed -o internet.so Rhttpd.o Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib -lR >make[5]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >mkdir -p -- /var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/modules >make[5]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/internet' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >making Lapack.d from Lapack.c >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >make[4]: `Makedeps' is up to date. >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >i686-pc-linux-gnu-gfortran -fpic -ffloat-store -c dlamch.f -o dlamch.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dlapack0.f -o dlapack0.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dlapack1.f -o dlapack1.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dlapack2.f -o dlapack2.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dlapack3.f -o dlapack3.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c dlapack4.f -o dlapack4.o >i686-pc-linux-gnu-gfortran -fopenmp -fpic -c cmplx.f -o cmplx.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -fopenmp -Wl,-O1 -Wl,--as-needed -o libRlapack.so dlamch.o dlapack0.o dlapack1.o dlapack2.o dlapack3.o dlapack4.o cmplx.o -lblas -lgfortran -lm -lquadmath >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c Lapack.c -o Lapack.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -Wl,-O1 -Wl,--as-needed -o lapack.so Lapack.o -L../../../lib -lR -L../../../lib -lRlapack -lblas -lgfortran -lm -lquadmath >make[5]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/lib/libRlapack.so is unchanged >make[5]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/lapack' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >making g_alab_her.d from g_alab_her.c >making g_cntrlify.d from g_cntrlify.c >making g_fontdb.d from g_fontdb.c >making g_her_glyph.d from g_her_glyph.c >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >make[4]: `Makedeps' is up to date. >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c g_alab_her.c -o g_alab_her.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c g_cntrlify.c -o g_cntrlify.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c g_fontdb.c -o g_fontdb.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c g_her_glyph.c -o g_her_glyph.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -Wl,-O1 -Wl,--as-needed -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib -lR -lm >make[5]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >make[5]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/vfonts' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >making dataentry.d from dataentry.c >making devX11.d from devX11.c >making rotated.d from rotated.c >making rbitmap.d from rbitmap.c >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >make[4]: `Makedeps' is up to date. >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c dataentry.c -o dataentry.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c devX11.c -o devX11.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rotated.c -o rotated.o >i686-pc-linux-gnu-gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng15 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c rbitmap.c -o rbitmap.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -Wl,-O1 -Wl,--as-needed -o R_X11.so dataentry.o devX11.o rotated.o rbitmap.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng15 -lz -lcairo -lX11 -lX11 -lXt -lXmu -ltiff -ljpeg -lpng -lz -L../../../lib -lR -lm >make[5]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >make[5]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules/X11' >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/modules' >make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library' >mkdir -p -- ../../library >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/profile' >building system startup profile >mkdir -p -- ../../../library/base/R >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/profile' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/base' >building package 'base' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/base' >mkdir -p -- ../../../library/base/demo >mkdir -p -- ../../../library/base/po >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/base' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/base' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools' >building package 'tools' >mkdir -p -- ../../../library/tools >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools' >mkdir -p -- ../../../library/tools/R >mkdir -p -- ../../../library/tools/po >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools' >make[5]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools/src' >making text.d from text.c >making init.d from init.c >making Rmd5.d from Rmd5.c >making md5.d from md5.c >making signals.d from signals.c >i686-pc-linux-gnu-gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c text.c -o text.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c init.c -o init.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c Rmd5.c -o Rmd5.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c md5.c -o md5.o >i686-pc-linux-gnu-gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O3 -march=native -mtune=native -fomit-frame-pointer -pipe -c signals.c -o signals.o >i686-pc-linux-gnu-gcc -std=gnu99 -shared -Wl,-O1 -Wl,--as-needed -o tools.so text.o init.o Rmd5.o md5.o signals.o -L../../../../lib -lR >make[6]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools/src' >make[6]: `Makedeps' is up to date. >make[6]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools/src' >make[6]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools/src' >mkdir -p -- ../../../../library/tools/libs >make[6]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools/src' >make[5]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools/src' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/tools' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/compiler' >building package 'compiler' >mkdir -p -- ../../../library/compiler >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/compiler' >mkdir -p -- ../../../library/compiler/R >mkdir -p -- ../../../library/compiler/po >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/compiler' >make[4]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/compiler' >byte-compiling package 'compiler' >make[4]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/compiler' >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/compiler' >make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/base' >byte-compiling package 'base' > > *** caught segfault *** >address 0x5ae90000, cause 'memory not mapped' > >Traceback: > 1: fun(libname, pkgname) > 2: doTryCatch(return(expr), name, parentenv, handler) > 3: tryCatchOne(expr, names, parentenv, handlers[[1L]]) > 4: tryCatchList(expr, classes, parentenv, handlers) > 5: tryCatch(fun(libname, pkgname), error = identity) > 6: runHook(".onLoad", env, package.lib, package) > 7: loadNamespace(name) > 8: doTryCatch(return(expr), name, parentenv, handler) > 9: tryCatchOne(expr, names, parentenv, handlers[[1L]]) >10: tryCatchList(expr, classes, parentenv, handlers) >11: tryCatch(loadNamespace(name), error = function(e) stop(e)) >12: getNamespace(ns) >13: asNamespace(pkg) >14: get(name, envir = asNamespace(pkg), inherits = FALSE) >15: compiler:::tryCmpfun >16: .Call("R_lazyLoadDBinsertValue", x[[1]], file, ascii, compress, hook, PACKAGE = "base") >17: lazyLoadDBinsertVariable(vars[i], from, datafile, ascii, compress, envhook) >18: makeLazyLoadDB(baseenv(), baseFileBase, variables = basevars) >19: eval(expr, envir, enclos) >20: eval(quote({ makeLazyLoadDB <- function(from, filebase, compress = TRUE, ascii = FALSE, variables) { envlist <- function(e) { names <- ls(e, all = TRUE) list <- .Call("R_getVarsFromFrame", names, e, FALSE, PACKAGE = "base") names(list) <- names list } envtable <- function() { idx <- 0 envs <- NULL enames <- character(0) find <- function(v, keys, vals) { for (i in seq_along(keys)) if (identical(v, keys[[i]])) return(vals[i]) NULL } getname <- function(e) find(e, envs, enames) getenv <- function(n) find(n, enames, envs) insert <- function(e) { idx <<- idx + 1 name <- paste("env", idx, sep = "::") envs <<- c(e, envs) enames <<- c(name, enames) name } list(insert = insert, getenv = getenv, getname = getname) } lazyLoadDBinsertValue <- function(value, file, ascii, compress, hook) .Call("R_lazyLoadDBinsertValue", value, file, ascii, compress, hook, PACKAGE = "base") lazyLoadDBinsertListElement <- function(x, i, file, ascii, compress, hook) .Call("R_lazyLoadDBinsertValue", x[[i]], file, ascii, compress, hook, PACKAGE = "base") lazyLoadDBinsertVariable <- function(n, e, file, ascii, compress, hook) { x <- .Call("R_getVarsFromFrame", n, e, FALSE, PACKAGE = "base") .Call("R_lazyLoadDBinsertValue", x[[1]], file, ascii, compress, hook, PACKAGE = "base") } mapfile <- paste(filebase, "rdx", sep = ".") datafile <- paste(filebase, "rdb", sep = ".") close(file(datafile, "w")) table <- envtable() varenv <- new.env(hash = TRUE) envenv <- new.env(hash = TRUE) envhook <- function(e) { if (is.environment(e)) { name <- table$getname(e) if (is.null(name)) { name <- table$insert(e) data <- list(bindings = envlist(e), enclos = parent.env(e)) key <- lazyLoadDBinsertValue(data, datafile, ascii, compress, envhook) assign(name, key, envir = envenv) } name } } if (is.environment(from)) { if (!missing(variables)) vars <- variables else vars <- ls(from, all = TRUE) } else if (is.list(from)) { vars <- names(from) if (length(vars) != length(from) || any(nchar(vars) == 0)) stop("source list must have names for all elements") } else stop("source must be an environment or a list") for (i in seq_along(vars)) { if (is.environment(from)) key <- lazyLoadDBinsertVariable(vars[i], from, datafile, ascii, compress, envhook) else key <- lazyLoadDBinsertListElement(from, i, datafile, ascii, compress, envhook) assign(vars[i], key, envir = varenv) } vals <- lapply(vars, get, envir = varenv, inherits = FALSE) names(vals) <- vars rvars <- ls(envenv, all = TRUE) rvals <- lapply(rvars, get, envir = envenv, inherits = FALSE) names(rvals) <- rvars val <- list(variables = vals, references = rvals, compressed = compress) saveRDS(val, mapfile) } omit <- c(".Last.value", ".AutoloadEnv", ".BaseNamespaceEnv", ".Device", ".Devices", ".Machine", ".Options", ".Platform") if (length(search()[search() != "Autoloads"]) != 2) stop("start R with NO packages loaded to create the data base") baseFileBase <- file.path(.Library, "base", "R", "base") if (file.info(baseFileBase)["size"] < 20000) stop("may already be using lazy loading on base") basevars <- ls(baseenv(), all.names = TRUE) prims <- basevars[sapply(basevars, function(n) is.primitive(get(n, baseenv())))] basevars <- basevars[!basevars %in% c(omit, prims)] makeLazyLoadDB(baseenv(), baseFileBase, variables = basevars)}), new.env()) >21: eval(expr, envir, enclos) >22: eval(expr, p) >23: eval.parent(substitute(eval(quote(expr), envir))) >24: local({ makeLazyLoadDB <- function(from, filebase, compress = TRUE, ascii = FALSE, variables) { envlist <- function(e) { names <- ls(e, all = TRUE) list <- .Call("R_getVarsFromFrame", names, e, FALSE, PACKAGE = "base") names(list) <- names list } envtable <- function() { idx <- 0 envs <- NULL enames <- character(0) find <- function(v, keys, vals) { for (i in seq_along(keys)) if (identical(v, keys[[i]])) return(vals[i]) NULL } getname <- function(e) find(e, envs, enames) getenv <- function(n) find(n, enames, envs) insert <- function(e) { idx <<- idx + 1 name <- paste("env", idx, sep = "::") envs <<- c(e, envs) enames <<- c(name, enames) name } list(insert = insert, getenv = getenv, getname = getname) } lazyLoadDBinsertValue <- function(value, file, ascii, compress, hook) .Call("R_lazyLoadDBinsertValue", value, file, ascii, compress, hook, PACKAGE = "base") lazyLoadDBinsertListElement <- function(x, i, file, ascii, compress, hook) .Call("R_lazyLoadDBinsertValue", x[[i]], file, ascii, compress, hook, PACKAGE = "base") lazyLoadDBinsertVariable <- function(n, e, file, ascii, compress, hook) { x <- .Call("R_getVarsFromFrame", n, e, FALSE, PACKAGE = "base") .Call("R_lazyLoadDBinsertValue", x[[1]], file, ascii, compress, hook, PACKAGE = "base") } mapfile <- paste(filebase, "rdx", sep = ".") datafile <- paste(filebase, "rdb", sep = ".") close(file(datafile, "w")) table <- envtable() varenv <- new.env(hash = TRUE) envenv <- new.env(hash = TRUE) envhook <- function(e) { if (is.environment(e)) { name <- table$getname(e) if (is.null(name)) { name <- table$insert(e) data <- list(bindings = envlist(e), enclos = parent.env(e)) key <- lazyLoadDBinsertValue(data, datafile, ascii, compress, envhook) assign(name, key, envir = envenv) } name } } if (is.environment(from)) { if (!missing(variables)) vars <- variables else vars <- ls(from, all = TRUE) } else if (is.list(from)) { vars <- names(from) if (length(vars) != length(from) || any(nchar(vars) == 0)) stop("source list must have names for all elements") } else stop("source must be an environment or a list") for (i in seq_along(vars)) { if (is.environment(from)) key <- lazyLoadDBinsertVariable(vars[i], from, datafile, ascii, compress, envhook) else key <- lazyLoadDBinsertListElement(from, i, datafile, ascii, compress, envhook) assign(vars[i], key, envir = varenv) } vals <- lapply(vars, get, envir = varenv, inherits = FALSE) names(vals) <- vars rvars <- ls(envenv, all = TRUE) rvals <- lapply(rvars, get, envir = envenv, inherits = FALSE) names(rvals) <- rvars val <- list(variables = vals, references = rvals, compressed = compress) saveRDS(val, mapfile) } omit <- c(".Last.value", ".AutoloadEnv", ".BaseNamespaceEnv", ".Device", ".Devices", ".Machine", ".Options", ".Platform") if (length(search()[search() != "Autoloads"]) != 2) stop("start R with NO packages loaded to create the data base") baseFileBase <- file.path(.Library, "base", "R", "base") if (file.info(baseFileBase)["size"] < 20000) stop("may already be using lazy loading on base") basevars <- ls(baseenv(), all.names = TRUE) prims <- basevars[sapply(basevars, function(n) is.primitive(get(n, baseenv())))] basevars <- basevars[!basevars %in% c(omit, prims)] makeLazyLoadDB(baseenv(), baseFileBase, variables = basevars)}) >aborting ... >/bin/sh: line 2: 19997 Done cat ./makebasedb.R > 19998 Segmentation fault | R_COMPILE_PKGS=1 R_COMPILER_SUPPRESS_ALL=1 R_DEFAULT_PACKAGES=NULL LC_ALL=C ../../../bin/R --vanilla --slave > /dev/null >make[3]: *** [../../../library/base/R/base.rdb] Error 139 >make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library/base' >make[2]: *** [R] Error 1 >make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src/library' >make[1]: *** [R] Error 1 >make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0/src' >make: *** [R] Error 1 > [31;01m*[0m ERROR: dev-lang/R-2.15.0 failed (compile phase): > [31;01m*[0m emake failed > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=dev-lang/R-2.15.0'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=dev-lang/R-2.15.0'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/dev-lang/R-2.15.0/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/dev-lang/R-2.15.0/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0' > [31;01m*[0m S: '/var/tmp/portage/dev-lang/R-2.15.0/work/R-2.15.0'
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