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Gentoo's Bugzilla – Attachment 303299 Details for
Bug 405873
[science overlay] sci-libs/lapackpp-2.5.4: configure: error: Blas/Lapack was not found.
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build.log
build.log (text/plain), 12.56 KB, created by
Martin Mokrejš
on 2012-02-26 09:57:36 UTC
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Description:
build.log
Filename:
MIME Type:
Creator:
Martin Mokrejš
Created:
2012-02-26 09:57:36 UTC
Size:
12.56 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: sci-libs/lapackpp-2.5.4 >[32;01m * [39;49;00mRepository: science >[32;01m * [39;49;00mMaintainer: sci@gentoo.org >[32;01m * [39;49;00mUSE: amd64 elibc_glibc kernel_linux multilib userland_GNU >[32;01m * [39;49;00mFEATURES: nostrip sandbox splitdebug >>>> Unpacking source... >>>> Unpacking lapackpp-2.5.4.tar.gz to /var/tmp/portage/sci-libs/lapackpp-2.5.4/work >>>> Source unpacked in /var/tmp/portage/sci-libs/lapackpp-2.5.4/work >>>> Preparing source in /var/tmp/portage/sci-libs/lapackpp-2.5.4/work/lapackpp-2.5.4 ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/lapackpp-2.5.4/work/lapackpp-2.5.4 ... >Package lapack was not found in the pkg-config search path. >Perhaps you should add the directory containing `lapack.pc' >to the PKG_CONFIG_PATH environment variable >No package 'lapack' found > * econf: updating lapackpp-2.5.4/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating lapackpp-2.5.4/config.sub with /usr/share/gnuconfig/config.sub >./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-dependency-tracking --disable-static --disable-atlas --with-blas=-lrefblas --with-lapack= >checking build system type... x86_64-pc-linux-gnu >checking host system type... x86_64-pc-linux-gnu >checking target system type... x86_64-pc-linux-gnu >checking for a BSD-compatible install... /usr/bin/install -c >checking whether build environment is sane... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking for gawk... gawk >checking whether make sets $(MAKE)... yes >checking whether make sets $(MAKE)... (cached) yes >checking whether build environment is sane... yes >checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ >checking whether the C++ compiler works... yes >checking for C++ compiler default output file name... a.out >checking for suffix of executables... >checking whether we are cross compiling... no >checking for suffix of object files... o >checking whether we are using the GNU C++ compiler... yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes >checking for style of include used by make... GNU >checking dependency style of x86_64-pc-linux-gnu-g++... none >checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc >checking whether we are using the GNU C compiler... yes >checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes >checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking dependency style of x86_64-pc-linux-gnu-gcc... none >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking for sed... /bin/sed >checking for a sed that does not truncate output... (cached) /bin/sed >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for fgrep... /bin/grep -F >checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B >checking the name lister (/usr/bin/nm -B) interface... BSD nm >checking whether ln -s works... yes >checking the maximum length of command line arguments... 1572864 >checking whether the shell understands some XSI constructs... yes >checking whether the shell understands "+="... yes >checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r >checking for x86_64-pc-linux-gnu-objdump... objdump >checking how to recognize dependent libraries... pass_all >checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar >checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip >checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib >checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for dlfcn.h... yes >checking whether we are using the GNU C++ compiler... (cached) yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes >checking dependency style of x86_64-pc-linux-gnu-g++... (cached) none >checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E >checking for objdir... .libs >checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no >checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC >checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes >checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes >checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC >checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes >checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking for an ANSI C-conforming const... yes >checking for ANSI C header files... (cached) yes >checking for stdlib.h... (cached) yes >checking for unistd.h... (cached) yes >checking bits/cpp_type_traits.h usability... yes >checking bits/cpp_type_traits.h presence... yes >checking for bits/cpp_type_traits.h... yes >checking whether the compiler implements namespaces... yes >checking for x86_64-pc-linux-gnu-g77... no >checking for x86_64-pc-linux-gnu-xlf... no >checking for x86_64-pc-linux-gnu-f77... no >checking for x86_64-pc-linux-gnu-frt... no >checking for x86_64-pc-linux-gnu-pgf77... no >checking for x86_64-pc-linux-gnu-cf77... no >checking for x86_64-pc-linux-gnu-fort77... no >checking for x86_64-pc-linux-gnu-fl32... no >checking for x86_64-pc-linux-gnu-af77... no >checking for x86_64-pc-linux-gnu-xlf90... no >checking for x86_64-pc-linux-gnu-f90... no >checking for x86_64-pc-linux-gnu-pgf90... no >checking for x86_64-pc-linux-gnu-pghpf... no >checking for x86_64-pc-linux-gnu-epcf90... no >checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes >checking for x86_64-pc-linux-gnu-g77... (cached) x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... (cached) yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... (cached) yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes >checking for x86_64-pc-linux-gnu-gfortran... (cached) x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... (cached) yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... (cached) yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes >checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v >checking for Fortran libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../.. -lgfortran -lm >checking for dummy main to link with Fortran libraries... none >checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v >checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/../../.. -lgfortran -lm >checking for dummy main to link with Fortran 77 libraries... none >checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore >checking for sgemm_ in -lrefblas ... yes >checking if ATLAS should be used... no >checking for cheev_... no >checking for cheev_ in -llapack... no >checking for cheev_ in -llapack32... no >checking for cheev_ in -llapack_rs6k... no >checking for any lapack library... none found >configure: error: Blas/Lapack was not found. >*** This means Lapack++ and matrix support cannot be compiled. >*** This makes this library unusable. Please get blas and lapack >*** installed. If you do have these installed, use the options >*** --with-blas=<libname> or --with-lapack=<libname> and/or set >*** the env variable LDFLAGS to include the appropriate linker >*** flags. > >!!! Please attach the following file when seeking support: >!!! /var/tmp/portage/sci-libs/lapackpp-2.5.4/work/lapackpp-2.5.4/config.log > [31;01m*[0m ERROR: sci-libs/lapackpp-2.5.4 failed (configure phase): > [31;01m*[0m econf failed > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 85: Called src_configure > [31;01m*[0m environment, line 154: Called econf '--disable-static' '--disable-atlas' '--with-blas=-lrefblas ' '--with-lapack=' > [31;01m*[0m phase-helpers.sh, line 467: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m die "econf failed" > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =sci-libs/lapackpp-2.5.4', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =sci-libs/lapackpp-2.5.4'. > [31;01m*[0m This ebuild is from an overlay named 'science': '/home/mmokrejs/proj/sci/' > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/lapackpp-2.5.4/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/lapackpp-2.5.4/temp/environment'. > [31;01m*[0m S: '/var/tmp/portage/sci-libs/lapackpp-2.5.4/work/lapackpp-2.5.4'
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bug 405873
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303301