* Package: dev-python/cvxopt-1.1.4-r1 * Repository: gentoo * Maintainer: sci-mathematics@gentoo.org * USE: amd64 dsdp elibc_glibc glpk kernel_linux multilib test userland_GNU * FEATURES: ccache preserve-libs sandbox splitdebug test userpriv usersandbox >>> Unpacking source... >>> Unpacking cvxopt-1.1.4.tar.gz to /var/tmp/portage/dev-python/cvxopt-1.1.4-r1/work >>> Source unpacked in /var/tmp/portage/dev-python/cvxopt-1.1.4-r1/work >>> Preparing source in /var/tmp/portage/dev-python/cvxopt-1.1.4-r1/work/cvxopt-1.1.4/src ... * Applying cvxopt-setup.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-python/cvxopt-1.1.4-r1/work/cvxopt-1.1.4/src ... >>> Source configured. >>> Compiling source in /var/tmp/portage/dev-python/cvxopt-1.1.4-r1/work/cvxopt-1.1.4/src ... * Building of dev-python/cvxopt-1.1.4-r1 with CPython 2.7... python2.7 setup.py build -b build-2.7 running build running build_py creating build-2.7 creating build-2.7/lib.linux-x86_64-2.7 creating build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/solvers.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/modeling.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/msk.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/misc.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/__init__.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/cvxprog.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/info.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/printing.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt copying python/coneprog.py -> build-2.7/lib.linux-x86_64-2.7/cvxopt warning: build_py: byte-compiling is disabled, skipping. running build_ext building 'glpk' extension creating build-2.7/temp.linux-x86_64-2.7 creating build-2.7/temp.linux-x86_64-2.7/C x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/glpk.c -o build-2.7/temp.linux-x86_64-2.7/C/glpk.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/glpk.o -L -L/usr/lib64 -lglpk -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/glpk.so building 'dsdp' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/dsdp.c -o build-2.7/temp.linux-x86_64-2.7/C/dsdp.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/dsdp.o -L -L -L/usr/lib64 -ldsdp -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/dsdp.so building 'base' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/base.c -o build-2.7/temp.linux-x86_64-2.7/C/base.o x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/dense.c -o build-2.7/temp.linux-x86_64-2.7/C/dense.o x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/sparse.c -o build-2.7/temp.linux-x86_64-2.7/C/sparse.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/base.o build-2.7/temp.linux-x86_64-2.7/C/dense.o build-2.7/temp.linux-x86_64-2.7/C/sparse.o -L -L/usr/lib64 -lreflapack -lrefblas -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/base.so building 'blas' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/blas.c -o build-2.7/temp.linux-x86_64-2.7/C/blas.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/blas.o -L -L/usr/lib64 -lrefblas -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/blas.so building 'lapack' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/lapack.c -o build-2.7/temp.linux-x86_64-2.7/C/lapack.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/lapack.o -L -L/usr/lib64 -lreflapack -lrefblas -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/lapack.so building 'umfpack' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python2.7 -c C/umfpack.c -o build-2.7/temp.linux-x86_64-2.7/C/umfpack.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/umfpack.o -L -L/usr/lib64 -lumfpack -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/umfpack.so building 'cholmod' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -DDLONG= -DNPARTITION=1 -I/usr/include/python2.7 -c C/cholmod.c -o build-2.7/temp.linux-x86_64-2.7/C/cholmod.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/cholmod.o -L -L/usr/lib64 -lcholmod -lrefblas -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/cholmod.so building 'amd' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -DDLONG= -I/usr/include/python2.7 -c C/amd.c -o build-2.7/temp.linux-x86_64-2.7/C/amd.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/amd.o -L/usr/lib64 -lamd -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/amd.so building 'misc_solvers' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -DDLONG= -I/usr/include/python2.7 -c C/misc_solvers.c -o build-2.7/temp.linux-x86_64-2.7/C/misc_solvers.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-2.7/temp.linux-x86_64-2.7/C/misc_solvers.o -L -L/usr/lib64 -lreflapack -lrefblas -lpython2.7 -o build-2.7/lib.linux-x86_64-2.7/cvxopt/misc_solvers.so * Building of dev-python/cvxopt-1.1.4-r1 with CPython 3.2... python3.2 setup.py build -b build-3.2 running build running build_py creating build-3.2 creating build-3.2/lib.linux-x86_64-3.2 creating build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/solvers.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/modeling.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/msk.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/misc.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/__init__.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/cvxprog.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/info.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/printing.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt copying python/coneprog.py -> build-3.2/lib.linux-x86_64-3.2/cvxopt warning: build_py: byte-compiling is disabled, skipping. running build_ext building 'glpk' extension creating build-3.2/temp.linux-x86_64-3.2 creating build-3.2/temp.linux-x86_64-3.2/C x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/glpk.c -o build-3.2/temp.linux-x86_64-3.2/C/glpk.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/glpk.o -L -L/usr/lib64 -lglpk -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/glpk.cpython-32.so building 'dsdp' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/dsdp.c -o build-3.2/temp.linux-x86_64-3.2/C/dsdp.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/dsdp.o -L -L -L/usr/lib64 -ldsdp -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/dsdp.cpython-32.so building 'base' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/base.c -o build-3.2/temp.linux-x86_64-3.2/C/base.o x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/dense.c -o build-3.2/temp.linux-x86_64-3.2/C/dense.o x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/sparse.c -o build-3.2/temp.linux-x86_64-3.2/C/sparse.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/base.o build-3.2/temp.linux-x86_64-3.2/C/dense.o build-3.2/temp.linux-x86_64-3.2/C/sparse.o -L -L/usr/lib64 -lreflapack -lrefblas -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/base.cpython-32.so building 'blas' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/blas.c -o build-3.2/temp.linux-x86_64-3.2/C/blas.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/blas.o -L -L/usr/lib64 -lrefblas -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/blas.cpython-32.so building 'lapack' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/lapack.c -o build-3.2/temp.linux-x86_64-3.2/C/lapack.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/lapack.o -L -L/usr/lib64 -lreflapack -lrefblas -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/lapack.cpython-32.so building 'umfpack' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -I/usr/include/python3.2 -c C/umfpack.c -o build-3.2/temp.linux-x86_64-3.2/C/umfpack.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/umfpack.o -L -L/usr/lib64 -lumfpack -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/umfpack.cpython-32.so building 'cholmod' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -DDLONG= -DNPARTITION=1 -I/usr/include/python3.2 -c C/cholmod.c -o build-3.2/temp.linux-x86_64-3.2/C/cholmod.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/cholmod.o -L -L/usr/lib64 -lcholmod -lrefblas -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/cholmod.cpython-32.so building 'amd' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -DDLONG= -I/usr/include/python3.2 -c C/amd.c -o build-3.2/temp.linux-x86_64-3.2/C/amd.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/amd.o -L/usr/lib64 -lamd -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/amd.cpython-32.so building 'misc_solvers' extension x86_64-pc-linux-gnu-gcc -pthread -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions -fPIC -DDLONG= -I/usr/include/python3.2 -c C/misc_solvers.c -o build-3.2/temp.linux-x86_64-3.2/C/misc_solvers.o x86_64-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=native -ggdb -floop-interchange -floop-strip-mine -floop-block -finline-functions build-3.2/temp.linux-x86_64-3.2/C/misc_solvers.o -L -L/usr/lib64 -lreflapack -lrefblas -lpython3.2 -o build-3.2/lib.linux-x86_64-3.2/cvxopt/misc_solvers.cpython-32.so >>> Source compiled. * Testing of dev-python/cvxopt-1.1.4-r1 with CPython 2.7... pcost dcost gap pres dres k/t 0: -8.1000e+00 -1.8300e+01 4e+00 0e+00 8e-01 1e+00 1: -8.8055e+00 -9.4357e+00 2e-01 1e-16 4e-02 3e-02 2: -8.9981e+00 -9.0049e+00 2e-03 1e-16 5e-04 4e-04 3: -9.0000e+00 -9.0000e+00 2e-05 1e-16 5e-06 4e-06 4: -9.0000e+00 -9.0000e+00 2e-07 1e-16 5e-08 4e-08 Optimal solution found. x = [ 1.00e+00] [ 1.00e+00] * Testing of dev-python/cvxopt-1.1.4-r1 with CPython 3.2... *** stack smashing detected ***: python3.2 - terminated python3.2: stack smashing attack in function - terminated Report to http://bugs.gentoo.org/ /var/tmp/portage/dev-python/cvxopt-1.1.4-r1/temp/environment: line 5161: 17184 Killed PYTHONPATH="$(ls -d ${S}/build-${PYTHON_ABI}/lib.*)" "$(PYTHON)" lp.py * ERROR: dev-python/cvxopt-1.1.4-r1 failed (test phase): * Testing failed with CPython 3.2 in testing() function * * Call stack: * ebuild.sh, line 85: Called src_test * environment, line 5164: Called python_execute_function 'testing' * environment, line 3467: Called die * The specific snippet of code: * die "${failure_message}"; * * If you need support, post the output of 'emerge --info =dev-python/cvxopt-1.1.4-r1', * the complete build log and the output of 'emerge -pqv =dev-python/cvxopt-1.1.4-r1'. * The complete build log is located at '/var/tmp/portage/dev-python/cvxopt-1.1.4-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-python/cvxopt-1.1.4-r1/temp/environment'. * S: '/var/tmp/portage/dev-python/cvxopt-1.1.4-r1/work/cvxopt-1.1.4/src'