These are the actions I will take, in order: u dev-lang/php:5.3::gentoo 5.3.9 to ::installed replacing 5.3.9_rc3 apache2 bcmath berkdb bzip2 -calendar -cdb -cgi cjk cli crypt ctype curl -curlwrappers -debug -doc -embed -enchant exif fileinfo filter -firebird -flatfile -fpm (-frontbase) ftp gd gdbm -gmp hash iconv -imap -inifile -intl -iodbc ipv6 json kerberos -kolab ldap ldap-sasl -libedit -mhash -mssql mysql mysqli -mysqlnd nls -oci8-instant-client -odbc -pcntl pdo phar pic posix postgres -qdbm readline -recode session -sharedmem simplexml snmp -soap sockets -spell sqlite -sqlite3 ssl -suhosin (-sybase-ct) -sysvipc threads -tidy tokenizer truetype unicode -wddx xml xmlreader -xmlrpc xmlwriter -xpm -xsl zip zlib build_options: symbols=split -optional_tests -trace -preserve_work Reasons: target Total: 1 upgrades Executing pretend actions: 1 of 1 1 of 1: Starting fetch for dev-lang/php-5.3.9:5.3::gentoo... Output from fetch dev-lang/php-5.3.9:5.3::gentoo: Checking 'php-5.3.9.tar.bz2'... ok Checking 'php-patchset-5.3.9-r0.tar.bz2'... ok Done fetch for dev-lang/php-5.3.9:5.3::gentoo 1 of 1: Starting install to / for dev-lang/php-5.3.9:5.3::gentoo replacing 5.3.9_rc3:5.3::installed... Output from installing dev-lang/php-5.3.9:5.3::gentoo to ::installed replacing 5.3.9_rc3:5.3::installed: Checking 'php-5.3.9.tar.bz2'... ok Checking 'php-patchset-5.3.9-r0.tar.bz2'... ok >>> Running ebuild phase killold as root:root... >>> Starting builtin_killold >>> Done builtin_killold >>> Completed ebuild phase killold >>> Running ebuild phases init saveenv as paludisbuild:paludisbuild... >>> Starting builtin_init >>> Done builtin_init >>> Starting builtin_saveenv >>> Done builtin_saveenv >>> Completed ebuild phases init saveenv >>> Running ebuild phases loadenv setup saveenv as root:root... >>> Starting builtin_loadenv >>> Done builtin_loadenv >>> Starting pkg_setup >>> Done pkg_setup >>> Starting builtin_saveenv >>> Done builtin_saveenv >>> Completed ebuild phases loadenv setup saveenv >>> Running ebuild phases loadenv unpack saveenv as paludisbuild:paludisbuild... >>> Starting builtin_loadenv >>> Done builtin_loadenv >>> Starting src_unpack >>> Unpacking php-5.3.9.tar.bz2 to /var/tmp/paludis/dev-lang-php-5.3.9/work tar jxf /usr/portage/distfiles/php-5.3.9.tar.bz2 --no-same-owner >>> Unpacking php-patchset-5.3.9-r0.tar.bz2 to /var/tmp/paludis/dev-lang-php-5.3.9/work tar jxf /usr/portage/distfiles/php-patchset-5.3.9-r0.tar.bz2 --no-same-owner >>> Done src_unpack >>> Starting builtin_saveenv >>> Done builtin_saveenv >>> Completed ebuild phases loadenv unpack saveenv >>> Running ebuild phases loadenv prepare saveenv as paludisbuild:paludisbuild... >>> Starting builtin_loadenv >>> Done builtin_loadenv >>> Starting src_prepare * Applying generic patches and fixes from upstream... * 001_all_multilib.patch ... [ ok ] * 002_all_iodbc-gentoo.patch ... [ ok ] * 003_all_c-client-symlink.patch ... [ ok ] * 004_all_strict_aliasing.patch ... [ ok ] * 005_all_mpm-peruser-itk-test.patch ... [ ok ] * 009_all_mysql_defaultport_gentoo.patch ... [ ok ] * 011_all_gmp_bits_per_mp_limb.patch ... [ ok ] * 012_all_oracle_instantclient_define.patch ... [ ok ] * 013_all_phar_locale.patch ... [ ok ] * 014_all_ldap--as-needed.patch ... [ ok ] * 015_all_mysql_socket_location-gentoo.patch ... [ ok ] * Done with patching * Running eautoreconf in '/var/tmp/paludis/dev-lang-php-5.3.9/work/php-5.3.9' ... * Running aclocal ... [ ok ] * Running libtoolize --copy --force --install ... [ ok ] * Running aclocal ... [ ok ] * Running autoconf ... [ ok ] * Running autoheader ... [ ok ] * Running elibtoolize in: php-5.3.9/ * Applying portage/1.2.0 patch ... * Applying sed/1.5.6 patch ... >>> Done src_prepare >>> Starting builtin_saveenv >>> Done builtin_saveenv >>> Completed ebuild phases loadenv prepare saveenv >>> Running ebuild phases loadenv configure saveenv as paludisbuild:paludisbuild... >>> Starting builtin_loadenv >>> Done builtin_loadenv >>> Starting src_configure econf: updating /var/tmp/paludis/dev-lang-php-5.3.9/work/php-5.3.9/config.sub with /usr/share/gnuconfig/config.sub econf: updating /var/tmp/paludis/dev-lang-php-5.3.9/work/php-5.3.9/config.guess with /usr/share/gnuconfig/config.guess econf: updating /var/tmp/paludis/dev-lang-php-5.3.9/work/sapis-build/cli/config.sub with /usr/share/gnuconfig/config.sub econf: updating /var/tmp/paludis/dev-lang-php-5.3.9/work/sapis-build/cli/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64/php5.3/lib64 --prefix=/usr/lib64/php5.3 --mandir=/usr/lib64/php5.3/man --infodir=/usr/lib64/php5.3/info --libdir=/usr/lib64/php5.3/lib --with-libdir=lib64 --without-pear --enable-maintainer-zts --enable-bcmath --with-bz2 --disable-calendar --enable-ctype --with-curl --without-curlwrappers --enable-dom --without-enchant --enable-exif --enable-fileinfo --enable-filter --enable-ftp --with-gettext --without-gmp --enable-hash --without-mhash --with-iconv --disable-intl --enable-ipv6 --enable-json --with-kerberos=/usr --enable-libxml --enable-mbstring --with-mcrypt --without-mssql --with-onig=/usr --with-openssl --with-openssl-dir=/usr --disable-pcntl --enable-phar --enable-pdo --with-pgsql --enable-posix --without-pspell --without-recode --enable-simplexml --disable-shmop --with-snmp --disable-soap --enable-sockets --with-sqlite=/usr --enable-sqlite-utf8 --without-sqlite3 --without-sybase-ct --disable-sysvmsg --disable-sysvsem --disable-sysvshm --without-tidy --enable-tokenizer --disable-wddx --enable-xml --enable-xmlreader --enable-xmlwriter --without-xmlrpc --without-xsl --enable-zip --with-zlib --disable-debug --enable-dba --without-cdb --with-db4 --disable-flatfile --with-gdbm --disable-inifile --without-qdbm --with-freetype-dir=/usr --with-t1lib=/usr --enable-gd-jis-conv --with-jpeg-dir=/usr --with-png-dir=/usr --without-xpm-dir --with-gd --with-ldap --with-ldap-sasl --with-mysql=/usr --with-mysql-sock=/var/run/mysqld/mysqld.sock --with-mysqli=/usr/bin/mysql_config --without-pdo-dblib --with-pdo-mysql=/usr --with-pdo-pgsql --without-pdo-sqlite --without-pdo-odbc --with-readline --without-libedit --without-mm --with-pic --with-pcre-regex=/usr --with-pcre-dir=/usr --with-config-file-path=/etc/php/cli-php5.3 --with-config-file-scan-dir=/etc/php/cli-php5.3/ext-active --disable-embed --enable-cli --disable-cgi --disable-fpm --without-apxs2 --build=x86_64-pc-linux-gnu checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for a sed that does not truncate output... /bin/sed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu Updated main/php_version.h checking for x86_64-pc-linux-gnu-cc... no checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for icc... no checking for suncc... no checking whether 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extension with re2c... no checking whether to force non-PIC code in shared modules... no checking whether /dev/urandom exists... yes configure: WARNING: You will need re2c 0.13.4 or later if you want to regenerate PHP parsers. ./configure: line 5368: test: too many arguments checking for pthreads_cflags... -pthread checking for pthreads_lib... Configuring SAPI modules checking for AOLserver support... no checking for Apache 1.x module support via DSO through APXS... no checking for Apache 1.x module support... no checking whether to enable Apache charset compatibility option... no checking for Apache 2.0 filter-module support via DSO through APXS... no checking for Apache 2.0 handler-module support via DSO through APXS... no checking for Apache 1.x (hooks) module support via DSO through APXS... no checking for Apache 1.x (hooks) module support... no checking whether to enable Apache charset compatibility option... no checking for Caudium support... no checking for CLI build... yes checking for Continuity support... no checking for embedded SAPI library support... no checking for FPM build... no checking for Zeus ISAPI support... no checking for LiteSpeed support... no checking for Milter support... no checking for NSAPI support... no checking for PHTTPD support... no checking for Pi3Web support... no checking whether Roxen module is build using ZTS... no checking for Roxen/Pike support... checking for thttpd... no checking for TUX... no checking for webjames... no checking whether to build CGI binary... no checking for chosen SAPI module... cli Running system checks checking for sendmail... /usr/bin/sendmail checking whether system uses EBCDIC... no checking whether byte ordering is bigendian... no checking whether writing to stdout works... 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(cached) yes checking for syslog.h... yes checking for sysexits.h... yes checking for sys/ioctl.h... yes checking for sys/file.h... yes checking for sys/mman.h... yes checking for sys/mount.h... yes checking for sys/poll.h... yes checking for sys/resource.h... yes checking for sys/select.h... yes checking for sys/socket.h... yes checking for sys/stat.h... (cached) yes checking for sys/statfs.h... yes checking for sys/statvfs.h... yes checking for sys/vfs.h... yes checking for sys/sysexits.h... no checking for sys/varargs.h... no checking for sys/wait.h... yes checking for sys/loadavg.h... no checking for termios.h... yes checking for unistd.h... (cached) yes checking for unix.h... no checking for utime.h... yes checking for sys/utsname.h... yes checking for sys/ipc.h... yes checking for dlfcn.h... yes checking for assert.h... (cached) yes checking for fopencookie... yes checking for broken getcwd... no checking for broken libc stdio... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for struct tm.tm_zone... yes checking for missing declarations of reentrant functions... done checking for fclose declaration... ok checking for tm_gmtoff in struct tm... yes checking for struct flock... yes checking for socklen_t... yes checking size of size_t... 8 checking size of long long... 8 checking size of long long int... 8 checking size of long... 8 checking size of int... 4 checking size of intmax_t... 8 checking size of ssize_t... 8 checking size of ptrdiff_t... 8 checking for struct stat.st_blksize... yes checking for struct stat.st_blocks... yes checking for struct stat.st_rdev... yes checking for size_t... yes checking for uid_t in sys/types.h... yes checking for struct sockaddr_storage... yes checking for field sa_len in struct sockaddr... no checking for IPv6 support... yes checking for vprintf... yes checking for _doprnt... no checking for alphasort... yes checking for asctime_r... yes checking for chroot... yes checking for ctime_r... yes checking for cuserid... yes checking for crypt... no checking for flock... yes checking for ftok... yes checking for funopen... no checking for gai_strerror... yes checking for gcvt... yes checking for getloadavg... yes checking for getlogin... yes checking for getprotobyname... yes checking for getprotobynumber... yes checking for getservbyname... yes checking for getservbyport... yes checking for gethostname... (cached) yes checking for getrusage... yes checking for gettimeofday... yes checking for gmtime_r... yes checking for getpwnam_r... yes checking for getgrnam_r... yes checking for getpwuid_r... yes checking for grantpt... yes checking for inet_ntoa... yes checking for inet_ntop... yes checking for inet_pton... yes checking for isascii... yes checking for link... yes checking for localtime_r... yes checking for lockf... yes checking for lchown... yes checking for lrand48... yes checking for memcpy... yes checking for memmove... yes checking for mkstemp... yes checking for mmap... yes checking for nl_langinfo... yes checking for perror... yes checking for poll... yes checking for ptsname... yes checking for putenv... yes checking for realpath... yes checking for random... yes checking for rand_r... yes checking for scandir... yes checking for setitimer... yes checking for setlocale... yes checking for localeconv... yes checking for setenv... yes checking for setpgid... yes checking for setsockopt... yes checking for setvbuf... yes checking for shutdown... yes checking for sin... yes checking for snprintf... yes checking for srand48... yes checking for srandom... yes checking for statfs... yes checking for statvfs... yes checking for std_syslog... no checking for strcasecmp... yes checking for strcoll... yes checking for strdup... yes checking for strerror... yes checking for strftime... yes checking for strnlen... yes checking for strptime... yes checking for strstr... yes checking for strtok_r... yes checking for symlink... yes checking for tempnam... yes checking for tzset... yes checking for unlockpt... yes checking for unsetenv... yes checking for usleep... yes checking for utime... yes checking for vsnprintf... yes checking for vasprintf... yes checking for asprintf... yes checking for nanosleep... yes checking for nanosleep in -lrt... yes checking for getaddrinfo... yes checking for __sync_fetch_and_add... yes checking for strlcat... no checking for strlcpy... no checking for getopt... yes checking for utime.h... 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PHP checking path to configuration file... /etc/php/cli-php5.3 checking where to scan for configuration files... /etc/php/cli-php5.3/ext-active checking whether to enable safe mode by default... no checking for safe mode exec dir... /usr/local/php/bin checking whether to enable PHP's own SIGCHLD handler... no checking whether to enable magic quotes by default... no checking whether to explicitly link against libgcc... no checking whether to enable short tags by default... yes checking whether to enable dmalloc... no checking whether to enable IPv6 support... yes checking how big to make fd sets... using system default Configuring extensions checking size of long... (cached) 8 checking size of int... (cached) 4 checking for int32_t... yes checking for uint32_t... yes checking for sys/types.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking for stdlib.h... 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(cached) no checking size of short... 2 checking size of int... (cached) 4 checking size of long... (cached) 8 checking size of long long... (cached) 8 checking for iconv support... yes checking for iconv... yes checking if iconv is glibc's... yes checking if iconv supports errno... yes checking if your cpp allows macro usage in include lines... yes checking for IMAP support... no checking for IMAP Kerberos support... /usr checking for IMAP SSL support... no checking for InterBase support... no checking whether to enable internationalization support... no checking whether to enable JavaScript Object Serialization support... yes checking for ANSI C header files... (cached) yes checking for LDAP support... yes checking for LDAP Cyrus SASL support... yes checking for 3 arg ldap_set_rebind_proc... yes checking for ldap_parse_result... no checking for ldap_parse_reference... no checking for ldap_start_tls_s... no checking for sasl_version in -lsasl2... yes checking for ldap_bind_s... no configure: error: LDAP build check failed. Please check config.log for more information. !!! ERROR in dev-lang/php-5.3.9::gentoo: !!! In econf at line 2462 !!! econf failed