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Gentoo's Bugzilla – Attachment 285983 Details for
Bug 382383
dev-python/numpy-1.6.1 IndexError: list index out of range
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/var/log/portage/dev-python:numpy-1.6.1:20110908-071154.log
dev-python:numpy-1.6.1:20110908-071154.log (text/plain), 11.02 KB, created by
tman
on 2011-09-09 16:06:50 UTC
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Description:
/var/log/portage/dev-python:numpy-1.6.1:20110908-071154.log
Filename:
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Creator:
tman
Created:
2011-09-09 16:06:50 UTC
Size:
11.02 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: dev-python/numpy-1.6.1 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: sci@gentoo.org python@gentoo.org >[32;01m * [39;49;00mUSE: amd64 elibc_glibc kernel_linux lapack multilib userland_GNU >[32;01m * [39;49;00mFEATURES: preserve-libs sandbox >>>> Unpacking source... >>>> Unpacking numpy-1.6.1.tar.gz to /var/tmp/portage/dev-python/numpy-1.6.1/work >>>> Source unpacked in /var/tmp/portage/dev-python/numpy-1.6.1/work >>>> Preparing source in /var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1 ... >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'blas' found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >Package 'blas', required by 'lapack', not found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'blas' found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >Package 'blas', required by 'lapack', not found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'blas' found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >No package 'blas' found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >Package 'blas', required by 'lapack', not found >Package blas was not found in the pkg-config search path. >Perhaps you should add the directory containing `blas.pc' >to the PKG_CONFIG_PATH environment variable >Package 'blas', required by 'lapack', not found >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1 ... > * Building of dev-python/numpy-1.6.1 with CPython 2.7... >python2.7 setup.py build -b build-2.7 config_fc --noopt --noarch --fcompiler=gnu95 >Running from numpy source directory.[39mF2PY Version 2[0m >[39mblas_opt_info:[0m >[39mblas_mkl_info:[0m >[39m libraries mkl,vml,guide not found in /usr/local/lib64[0m >[39m libraries mkl,vml,guide not found in /usr/local/lib[0m >[39m libraries mkl,vml,guide not found in /usr/lib64[0m >[39m libraries mkl,vml,guide not found in /usr/lib[0m >[39m NOT AVAILABLE[0m >[39m[0m >[39matlas_blas_threads_info:[0m >[39mSetting PTATLAS=ATLAS[0m >/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py:528: UserWarning: Specified path is invalid. > warnings.warn('Specified path %s is invalid.' % d) >[39mSetting PTATLAS=ATLAS[0m >[39mcustomize GnuFCompiler[0m >[32mFound executable /usr/bin/x86_64-pc-linux-gnu-gfortran[0m >[31mgnu: no Fortran 90 compiler found[0m >[31mCould not locate executable g77[0m >[31mCould not locate executable f77[0m >[31mgnu: no Fortran 90 compiler found[0m >[39mcustomize IntelFCompiler[0m >[31mCould not locate executable ifort[0m >[31mCould not locate executable ifc[0m >[31mintel: no Fortran 90 compiler found[0m >[31mintel: no Fortran 90 compiler found[0m >[39mcustomize LaheyFCompiler[0m >[31mCould not locate executable lf95[0m >[31mlahey: no Fortran 90 compiler found[0m >[31mlahey: no Fortran 90 compiler found[0m >[39mcustomize PGroupFCompiler[0m >[31mCould not locate executable pgf90[0m >[31mpg: no Fortran 90 compiler found[0m >[31mpg: no Fortran 90 compiler found[0m >[39mcustomize AbsoftFCompiler[0m >[31mCould not locate executable f90[0m >[31mabsoft: no Fortran 90 compiler found[0m >[31mabsoft: no Fortran 90 compiler found[0m >[39mcustomize NAGFCompiler[0m >[31mCould not locate executable f95[0m >[31mnag: no Fortran 90 compiler found[0m >[31mnag: no Fortran 90 compiler found[0m >[39mcustomize VastFCompiler[0m >[39mcustomize CompaqFCompiler[0m >[31mCould not locate executable fort[0m >[31mcompaq: no Fortran 90 compiler found[0m >[31mcompaq: no Fortran 90 compiler found[0m >[39mcustomize IntelItaniumFCompiler[0m >[31mCould not locate executable efort[0m >[31mCould not locate executable efc[0m >[31mintele: no Fortran 90 compiler found[0m >[31mintele: no Fortran 90 compiler found[0m >[39mcustomize IntelEM64TFCompiler[0m >[31mintelem: no Fortran 90 compiler found[0m >[31mintelem: no Fortran 90 compiler found[0m >[39mcustomize Gnu95FCompiler[0m >[32mFound executable /usr/bin/gfortran[0m >[39mcustomize Gnu95FCompiler[0m >[39mcustomize Gnu95FCompiler using config[0m >[39mcompiling '_configtest.c':[0m >[39m >/* This file is generated from numpy/distutils/system_info.py */ >void ATL_buildinfo(void); >int main(void) { > ATL_buildinfo(); > return 0; >} >[0m >[39mC compiler: x86_64-pc-linux-gnu-gcc -march=core2 -O2 -pipe -march=core2 -O2 -pipe -fno-strict-aliasing -fPIC >[0m >[39mcompile options: '-c'[0m >[39mx86_64-pc-linux-gnu-gcc: _configtest.c[0m >[39mx86_64-pc-linux-gnu-gcc -march=core2 -O2 -pipe _configtest.o -L/usr/lib64 -o _configtest[0m >_configtest.o: In function `main': >_configtest.c:(.text+0x5): undefined reference to `ATL_buildinfo' >collect2: ld returned 1 exit status >_configtest.o: In function `main': >_configtest.c:(.text+0x5): undefined reference to `ATL_buildinfo' >collect2: ld returned 1 exit status >[39mfailure.[0m >[39mremoving: _configtest.c _configtest.o[0m >[39mStatus: 255[0m >[39mOutput: [39mcompiling '_configtest.c':[0m >[39m >/* This file is generated from numpy/distutils/system_info.py */ >void ATL_buildinfo(void); >int main(void) { > ATL_buildinfo(); > return 0; >} >[0m >[39mC compiler: x86_64-pc-linux-gnu-gcc -march=core2 -O2 -pipe -march=core2 -O2 -pipe -fno-strict-aliasing -fPIC >[0m >[39mcompile options: '-c'[0m >[39mx86_64-pc-linux-gnu-gcc: _configtest.c[0m >[39mx86_64-pc-linux-gnu-gcc -march=core2 -O2 -pipe _configtest.o -L/usr/lib64 -o _configtest[0m >_configtest.o: In function `main': >_configtest.c:(.text+0x5): undefined reference to `ATL_buildinfo' >collect2: ld returned 1 exit status >[0m >[39mSetting PTATLAS=ATLAS[0m >[39m FOUND:[0m >[39m libraries = [][0m >[39m library_dirs = ['/usr/lib64'][0m >[39m language = c[0m >[39m define_macros = [('ATLAS_INFO', '"\\"None\\""')][0m >[39m include_dirs = ['/usr/include/atlas'][0m >[39m[0m >[39m FOUND:[0m >[39m libraries = [][0m >[39m library_dirs = ['/usr/lib64'][0m >[39m language = c[0m >[39m define_macros = [('ATLAS_INFO', '"\\"None\\""')][0m >[39m include_dirs = ['/usr/include/atlas'][0m >[39m[0m >[39mlapack_opt_info:[0m >[39mlapack_mkl_info:[0m >[39mmkl_info:[0m >[39m libraries mkl,vml,guide not found in /usr/local/lib64[0m >[39m libraries mkl,vml,guide not found in /usr/local/lib[0m >[39m libraries mkl,vml,guide not found in /usr/lib64[0m >[39m libraries mkl,vml,guide not found in /usr/lib[0m >[39m NOT AVAILABLE[0m >[39m[0m >[39m NOT AVAILABLE[0m >[39m[0m >[39matlas_threads_info:[0m >[39mSetting PTATLAS=ATLAS[0m >[39mnumpy.distutils.system_info.atlas_threads_info[0m >[39mSetting PTATLAS=ATLAS[0m >Traceback (most recent call last): > File "setup.py", line 196, in <module> > setup_package() > File "setup.py", line 189, in setup_package > configuration=configuration ) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/core.py", line 152, in setup > config = configuration() > File "setup.py", line 142, in configuration > config.add_subpackage('numpy') > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/misc_util.py", line 1002, in add_subpackage > caller_level = 2) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/misc_util.py", line 971, in get_subpackage > caller_level = caller_level + 1) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py > config = setup_module.configuration(*args) > File "numpy/setup.py", line 14, in configuration > config.add_subpackage('linalg') > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/misc_util.py", line 1002, in add_subpackage > caller_level = 2) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/misc_util.py", line 971, in get_subpackage > caller_level = caller_level + 1) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py > config = setup_module.configuration(*args) > File "numpy/linalg/setup.py", line 12, in configuration > lapack_info = get_info('lapack_opt',0) # and {} > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py", line 311, in get_info > return cl().get_info(notfound_action) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py", line 456, in get_info > self.calc_info() > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py", line 1314, in calc_info > atlas_info = get_info('atlas_threads') > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py", line 311, in get_info > return cl().get_info(notfound_action) > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py", line 456, in get_info > self.calc_info() > File "/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1/numpy/distutils/system_info.py", line 986, in calc_info > lapack_name = lapack['libraries'][0] >IndexError: list index out of range > [31;01m*[0m ERROR: dev-python/numpy-1.6.1 failed (compile phase): > [31;01m*[0m Building failed with CPython 2.7 in distutils_building() function > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 56: Called src_compile > [31;01m*[0m environment, line 5898: Called distutils_src_compile 'config_fc' '--noopt' '--noarch' '--fcompiler=gnu95' > [31;01m*[0m environment, line 1696: Called python_execute_function 'distutils_building' 'config_fc' '--noopt' '--noarch' '--fcompiler=gnu95' > [31;01m*[0m environment, line 4149: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m die "${failure_message}"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =dev-python/numpy-1.6.1', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =dev-python/numpy-1.6.1'. > [31;01m*[0m The complete build log is located at '/var/log/portage/dev-python:numpy-1.6.1:20110908-071154.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/dev-python/numpy-1.6.1/temp/environment'. > [31;01m*[0m S: '/var/tmp/portage/dev-python/numpy-1.6.1/work/numpy-1.6.1'
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