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Gentoo's Bugzilla – Attachment 284521 Details for
Bug 380549
sci-libs/cholmod-1.7.3 - shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory
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config.log
config.log (text/plain), 65.75 KB, created by
Alex
on 2011-08-24 18:57:23 UTC
(
hide
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Description:
config.log
Filename:
MIME Type:
Creator:
Alex
Created:
2011-08-24 18:57:23 UTC
Size:
65.75 KB
patch
obsolete
>This file contains any messages produced by compilers while >running configure, to aid debugging if configure makes a mistake. > >It was created by cholmod configure 1.7.0, which was >generated by GNU Autoconf 2.68. Invocation command line was > > $ ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --with-blas= --with-lapack= --enable-mod-supernodal --enable-mod-modify --enable-mod-matrixops --disable-mod-partition --disable-static > >## --------- ## >## Platform. ## >## --------- ## > >hostname = localhost >uname -m = x86_64 >uname -r = 3.0.0-gentoo >uname -s = Linux >uname -v = #1 Sun Jul 31 22:48:16 YEKT 2011 > >/usr/bin/uname -p = AMD Athlon(tm) 64 Processor 2800+ >/bin/uname -X = unknown > >/bin/arch = unknown >/usr/bin/arch -k = unknown >/usr/convex/getsysinfo = unknown >/usr/bin/hostinfo = unknown >/bin/machine = unknown >/usr/bin/oslevel = unknown >/bin/universe = unknown > >PATH: /usr/lib64/ccache/bin >PATH: /usr/local/sbin >PATH: /usr/local/bin >PATH: /usr/sbin >PATH: /usr/bin >PATH: /sbin >PATH: /bin >PATH: /opt/bin >PATH: /usr/x86_64-pc-linux-gnu/gcc-bin/4.4.5 >PATH: /usr/lib64/subversion/bin >PATH: /usr/lib64/portage/bin/ebuild-helpers > > >## ----------- ## >## Core tests. ## >## ----------- ## > >configure:2362: checking for a BSD-compatible install >configure:2430: result: /usr/bin/install -c >configure:2441: checking whether build environment is sane >configure:2491: result: yes >configure:2632: checking for a thread-safe mkdir -p >configure:2671: result: /bin/mkdir -p >configure:2684: checking for gawk >configure:2700: found /usr/bin/gawk >configure:2711: result: gawk >configure:2722: checking whether make sets $(MAKE) >configure:2744: result: yes >configure:2854: checking build system type >configure:2868: result: x86_64-pc-linux-gnu >configure:2888: checking host system type >configure:2901: result: x86_64-pc-linux-gnu >configure:2942: checking how to print strings >configure:2969: result: printf >configure:3002: checking for style of include used by make >configure:3030: result: GNU >configure:3060: checking for x86_64-pc-linux-gnu-gcc >configure:3076: found /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-gcc >configure:3087: result: x86_64-pc-linux-gnu-gcc >configure:3356: checking for C compiler version >configure:3365: x86_64-pc-linux-gnu-gcc --version >&5 >x86_64-pc-linux-gnu-gcc (Gentoo 4.4.5 p1.0, pie-0.4.5) 4.4.5 >Copyright (C) 2010 Free Software Foundation, Inc. >This is free software; see the source for copying conditions. There is NO >warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. > >configure:3376: $? = 0 >configure:3365: x86_64-pc-linux-gnu-gcc -v >&5 >Using built-in specs. >Target: x86_64-pc-linux-gnu >Configured with: /home/portage/portage/sys-devel/gcc-4.4.5/work/gcc-4.4.5/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.4.5 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --with-ppl --with-cloog --enable-nls --without-included-gettext --with-system-zlib --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/python --enable-checking=release --disable-libgcj --enable-languages=c,c++,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.4.5 p1.0, pie-0.4.5' >Thread model: posix >gcc version 4.4.5 (Gentoo 4.4.5 p1.0, pie-0.4.5) >configure:3376: $? = 0 >configure:3365: x86_64-pc-linux-gnu-gcc -V >&5 >x86_64-pc-linux-gnu-gcc: '-V' option must have argument >configure:3376: $? = 1 >configure:3365: x86_64-pc-linux-gnu-gcc -qversion >&5 >x86_64-pc-linux-gnu-gcc: unrecognized option '-qversion' >x86_64-pc-linux-gnu-gcc: no input files >configure:3376: $? = 1 >configure:3396: checking whether the C compiler works >configure:3418: x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c >&5 >configure:3422: $? = 0 >configure:3470: result: yes >configure:3473: checking for C compiler default output file name >configure:3475: result: a.out >configure:3481: checking for suffix of executables >configure:3488: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c >&5 >configure:3492: $? = 0 >configure:3514: result: >configure:3536: checking whether we are cross compiling >configure:3544: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c >&5 >configure:3548: $? = 0 >configure:3555: ./conftest >configure:3559: $? = 0 >configure:3574: result: no >configure:3579: checking for suffix of object files >configure:3601: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:3605: $? = 0 >configure:3626: result: o >configure:3630: checking whether we are using the GNU C compiler >configure:3649: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:3649: $? = 0 >configure:3658: result: yes >configure:3667: checking whether x86_64-pc-linux-gnu-gcc accepts -g >configure:3687: x86_64-pc-linux-gnu-gcc -c -g conftest.c >&5 >configure:3687: $? = 0 >configure:3728: result: yes >configure:3745: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 >configure:3809: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:3809: $? = 0 >configure:3822: result: none needed >configure:3844: checking dependency style of x86_64-pc-linux-gnu-gcc >configure:3954: result: gcc3 >configure:3969: checking for a sed that does not truncate output >configure:4033: result: /bin/sed >configure:4051: checking for grep that handles long lines and -e >configure:4109: result: /bin/grep >configure:4114: checking for egrep >configure:4176: result: /bin/grep -E >configure:4181: checking for fgrep >configure:4243: result: /bin/grep -F >configure:4278: checking for ld used by x86_64-pc-linux-gnu-gcc >configure:4345: result: /usr/x86_64-pc-linux-gnu/bin/ld >configure:4352: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld >configure:4367: result: yes >configure:4379: checking for BSD- or MS-compatible name lister (nm) >configure:4428: result: /usr/bin/nm -B >configure:4558: checking the name lister (/usr/bin/nm -B) interface >configure:4565: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:4568: /usr/bin/nm -B "conftest.o" >configure:4571: output >0000000000000000 B some_variable >configure:4578: result: BSD nm >configure:4581: checking whether ln -s works >configure:4585: result: yes >configure:4593: checking the maximum length of command line arguments >configure:4718: result: 1572864 >configure:4735: checking whether the shell understands some XSI constructs >configure:4745: result: yes >configure:4749: checking whether the shell understands "+=" >configure:4755: result: yes >configure:4790: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format >configure:4830: result: func_convert_file_noop >configure:4837: checking how to convert x86_64-pc-linux-gnu file names to toolchain format >configure:4857: result: func_convert_file_noop >configure:4864: checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files >configure:4871: result: -r >configure:4905: checking for x86_64-pc-linux-gnu-objdump >configure:4921: found /usr/bin/x86_64-pc-linux-gnu-objdump >configure:4932: result: x86_64-pc-linux-gnu-objdump >configure:5004: checking how to recognize dependent libraries >configure:5206: result: pass_all >configure:5251: checking for x86_64-pc-linux-gnu-dlltool >configure:5281: result: no >configure:5291: checking for dlltool >configure:5321: result: no >configure:5351: checking how to associate runtime and link libraries >configure:5378: result: printf %s\n >configure:5395: checking for x86_64-pc-linux-gnu-ar >configure:5411: found /usr/bin/x86_64-pc-linux-gnu-ar >configure:5422: result: x86_64-pc-linux-gnu-ar >configure:5503: checking for archiver @FILE support >configure:5520: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:5520: $? = 0 >configure:5523: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 >configure:5526: $? = 0 >configure:5531: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 >x86_64-pc-linux-gnu-ar: conftest.o: No such file or directory >configure:5534: $? = 1 >configure:5546: result: @ >configure:5564: checking for x86_64-pc-linux-gnu-strip >configure:5580: found /usr/bin/x86_64-pc-linux-gnu-strip >configure:5591: result: x86_64-pc-linux-gnu-strip >configure:5663: checking for x86_64-pc-linux-gnu-ranlib >configure:5679: found /usr/bin/x86_64-pc-linux-gnu-ranlib >configure:5690: result: x86_64-pc-linux-gnu-ranlib >configure:5832: checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object >configure:5951: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:5954: $? = 0 >configure:5958: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm >configure:5961: $? = 0 >configure:6027: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c conftstm.o >&5 >configure:6030: $? = 0 >configure:6068: result: ok >configure:6105: checking for sysroot >configure:6135: result: no >configure:6212: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:6215: $? = 0 >configure:6338: checking for x86_64-pc-linux-gnu-mt >configure:6368: result: no >configure:6378: checking for mt >configure:6408: result: no >configure:6428: checking if : is a manifest tool >configure:6434: : '-?' >configure:6442: result: no >configure:7074: checking how to run the C preprocessor >configure:7105: x86_64-pc-linux-gnu-gcc -E conftest.c >configure:7105: $? = 0 >configure:7119: x86_64-pc-linux-gnu-gcc -E conftest.c >conftest.c:11:28: error: ac_nonexistent.h: No such file or directory >configure:7119: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| /* end confdefs.h. */ >| #include <ac_nonexistent.h> >configure:7144: result: x86_64-pc-linux-gnu-gcc -E >configure:7164: x86_64-pc-linux-gnu-gcc -E conftest.c >configure:7164: $? = 0 >configure:7178: x86_64-pc-linux-gnu-gcc -E conftest.c >conftest.c:11:28: error: ac_nonexistent.h: No such file or directory >configure:7178: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| /* end confdefs.h. */ >| #include <ac_nonexistent.h> >configure:7207: checking for ANSI C header files >configure:7227: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7227: $? = 0 >configure:7300: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c >&5 >configure:7300: $? = 0 >configure:7300: ./conftest >configure:7300: $? = 0 >configure:7311: result: yes >configure:7324: checking for sys/types.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for sys/stat.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for stdlib.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for string.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for memory.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for strings.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for inttypes.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for stdint.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7324: checking for unistd.h >configure:7324: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7324: $? = 0 >configure:7324: result: yes >configure:7338: checking for dlfcn.h >configure:7338: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:7338: $? = 0 >configure:7338: result: yes >configure:7525: checking for objdir >configure:7540: result: .libs >configure:7807: checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions >configure:7825: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native -fno-rtti -fno-exceptions conftest.c >&5 >cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C >cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C >configure:7829: $? = 0 >configure:7842: result: no >configure:8152: checking for x86_64-pc-linux-gnu-gcc option to produce PIC >configure:8159: result: -fPIC -DPIC >configure:8167: checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works >configure:8185: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native -fPIC -DPIC -DPIC conftest.c >&5 >configure:8189: $? = 0 >configure:8202: result: yes >configure:8231: checking if x86_64-pc-linux-gnu-gcc static flag -static works >configure:8259: result: yes >configure:8274: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o >configure:8295: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native -o out/conftest2.o conftest.c >&5 >configure:8299: $? = 0 >configure:8321: result: yes >configure:8329: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o >configure:8376: result: yes >configure:8409: checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries >configure:9567: result: yes >configure:9604: checking whether -lc should be explicitly linked in >configure:9612: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:9615: $? = 0 >configure:9630: x86_64-pc-linux-gnu-gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 >configure:9633: $? = 0 >configure:9647: result: no >configure:9812: checking dynamic linker characteristics >configure:10339: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-rpath -Wl,/foo conftest.c >&5 >configure:10339: $? = 0 >configure:10561: result: GNU/Linux ld.so >configure:10668: checking how to hardcode library paths into programs >configure:10693: result: immediate >configure:11233: checking whether stripping libraries is possible >configure:11238: result: yes >configure:11273: checking if libtool supports shared libraries >configure:11275: result: yes >configure:11278: checking whether to build shared libraries >configure:11299: result: yes >configure:11302: checking whether to build static libraries >configure:11306: result: no >configure:11342: checking for sqrt in -lm >configure:11367: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lm >&5 >conftest.c:30: warning: conflicting types for built-in function 'sqrt' >configure:11367: $? = 0 >configure:11376: result: yes >configure:11389: checking UFconfig.h usability >configure:11389: x86_64-pc-linux-gnu-gcc -c -O2 -pipe -march=native conftest.c >&5 >configure:11389: $? = 0 >configure:11389: result: yes >configure:11389: checking UFconfig.h presence >configure:11389: x86_64-pc-linux-gnu-gcc -E conftest.c >configure:11389: $? = 0 >configure:11389: result: yes >configure:11389: checking for UFconfig.h >configure:11389: result: yes >configure:11407: result: Enabling mod-check: yes >configure:11417: result: Enabling mod-cholesku: yes >configure:11427: result: Enabling mod-partition: no >configure:11437: result: Enabling mod-matrixops: yes >configure:11447: result: Enabling mod-modify: yes >configure:11457: result: Enabling mod-supernoda: yes >configure:12043: checking for x86_64-pc-linux-gnu-g77 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-xlf >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-f77 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-frt >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-pgf77 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-cf77 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-fort77 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-fl32 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-af77 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-xlf90 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-f90 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-pgf90 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-pghpf >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-epcf90 >configure:12073: result: no >configure:12043: checking for x86_64-pc-linux-gnu-gfortran >configure:12059: found /usr/bin/x86_64-pc-linux-gnu-gfortran >configure:12070: result: x86_64-pc-linux-gnu-gfortran >configure:12140: checking for Fortran 77 compiler version >configure:12149: x86_64-pc-linux-gnu-gfortran --version >&5 >GNU Fortran (Gentoo 4.4.5 p1.0, pie-0.4.5) 4.4.5 >Copyright (C) 2010 Free Software Foundation, Inc. > >GNU Fortran comes with NO WARRANTY, to the extent permitted by law. >You may redistribute copies of GNU Fortran >under the terms of the GNU General Public License. >For more information about these matters, see the file named COPYING > >configure:12160: $? = 0 >configure:12149: x86_64-pc-linux-gnu-gfortran -v >&5 >Using built-in specs. >Target: x86_64-pc-linux-gnu >Configured with: /home/portage/portage/sys-devel/gcc-4.4.5/work/gcc-4.4.5/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.4.5 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --with-ppl --with-cloog --enable-nls --without-included-gettext --with-system-zlib --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/python --enable-checking=release --disable-libgcj --enable-languages=c,c++,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.4.5 p1.0, pie-0.4.5' >Thread model: posix >gcc version 4.4.5 (Gentoo 4.4.5 p1.0, pie-0.4.5) >configure:12160: $? = 0 >configure:12149: x86_64-pc-linux-gnu-gfortran -V >&5 >x86_64-pc-linux-gnu-gfortran: '-V' option must have argument >configure:12160: $? = 1 >configure:12149: x86_64-pc-linux-gnu-gfortran -qversion >&5 >x86_64-pc-linux-gnu-gfortran: unrecognized option '-qversion' >x86_64-pc-linux-gnu-gfortran: no input files >configure:12160: $? = 1 >configure:12169: checking whether we are using the GNU Fortran 77 compiler >configure:12182: x86_64-pc-linux-gnu-gfortran -c conftest.F >&5 >configure:12182: $? = 0 >configure:12191: result: yes >configure:12197: checking whether x86_64-pc-linux-gnu-gfortran accepts -g >configure:12208: x86_64-pc-linux-gnu-gfortran -c -g conftest.f >&5 >configure:12208: $? = 0 >configure:12216: result: yes >configure:12254: checking for x86_64-pc-linux-gnu-g77 >configure:12281: result: x86_64-pc-linux-gnu-gfortran >configure:12351: checking for Fortran 77 compiler version >configure:12360: x86_64-pc-linux-gnu-gfortran --version >&5 >GNU Fortran (Gentoo 4.4.5 p1.0, pie-0.4.5) 4.4.5 >Copyright (C) 2010 Free Software Foundation, Inc. > >GNU Fortran comes with NO WARRANTY, to the extent permitted by law. >You may redistribute copies of GNU Fortran >under the terms of the GNU General Public License. >For more information about these matters, see the file named COPYING > >configure:12371: $? = 0 >configure:12360: x86_64-pc-linux-gnu-gfortran -v >&5 >Using built-in specs. >Target: x86_64-pc-linux-gnu >Configured with: /home/portage/portage/sys-devel/gcc-4.4.5/work/gcc-4.4.5/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.4.5 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --with-ppl --with-cloog --enable-nls --without-included-gettext --with-system-zlib --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.4.5/python --enable-checking=release --disable-libgcj --enable-languages=c,c++,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.4.5 p1.0, pie-0.4.5' >Thread model: posix >gcc version 4.4.5 (Gentoo 4.4.5 p1.0, pie-0.4.5) >configure:12371: $? = 0 >configure:12360: x86_64-pc-linux-gnu-gfortran -V >&5 >x86_64-pc-linux-gnu-gfortran: '-V' option must have argument >configure:12371: $? = 1 >configure:12360: x86_64-pc-linux-gnu-gfortran -qversion >&5 >x86_64-pc-linux-gnu-gfortran: unrecognized option '-qversion' >x86_64-pc-linux-gnu-gfortran: no input files >configure:12371: $? = 1 >configure:12380: checking whether we are using the GNU Fortran 77 compiler >configure:12402: result: yes >configure:12408: checking whether x86_64-pc-linux-gnu-gfortran accepts -g >configure:12427: result: yes >configure:12563: checking if libtool supports shared libraries >configure:12565: result: yes >configure:12568: checking whether to build shared libraries >configure:12588: result: yes >configure:12591: checking whether to build static libraries >configure:12595: result: no >configure:12899: checking for x86_64-pc-linux-gnu-gfortran option to produce PIC >configure:12906: result: -fPIC >configure:12914: checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works >configure:12932: x86_64-pc-linux-gnu-gfortran -c -fPIC conftest.f >&5 >configure:12936: $? = 0 >configure:12949: result: yes >configure:12972: checking if x86_64-pc-linux-gnu-gfortran static flag -static works >configure:13000: result: yes >configure:13012: checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o >configure:13033: x86_64-pc-linux-gnu-gfortran -c -o out/conftest2.o conftest.f >&5 >configure:13037: $? = 0 >configure:13059: result: yes >configure:13064: checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o >configure:13111: result: yes >configure:13141: checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries >configure:14249: result: yes >configure:14392: checking dynamic linker characteristics >configure:15069: result: GNU/Linux ld.so >configure:15122: checking how to hardcode library paths into programs >configure:15147: result: immediate >configure:15184: checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran >configure:15194: x86_64-pc-linux-gnu-gfortran -c conftest.f >&5 >configure:15194: $? = 0 >configure:15212: x86_64-pc-linux-gnu-gfortran -o conftest -v -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.f -lm >Using built-in specs. >Target: x86_64-pc-linux-gnu >Thread model: posix >gcc version 4.4.5 (Gentoo 4.4.5 p1.0, pie-0.4.5) > /usr/libexec/gcc/x86_64-pc-linux-gnu/4.4.5/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -auxbase conftest -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/finclude -o /home/portage/portage/sci-libs/cholmod-1.7.3/temp/cc6MhnnD.s >GNU Fortran (Gentoo 4.4.5 p1.0, pie-0.4.5) version 4.4.5 (x86_64-pc-linux-gnu) > compiled by GNU C version 4.4.5, GMP version 5.0.2, MPFR version 3.0.1. >warning: MPFR header version 3.0.1 differs from library version 3.0.1-p4. >GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 > /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/as -V -Qy -o /home/portage/portage/sci-libs/cholmod-1.7.3/temp/cc09RUMk.o /home/portage/portage/sci-libs/cholmod-1.7.3/temp/cc6MhnnD.s >GNU assembler version 2.20.1 (x86_64-pc-linux-gnu) using BFD version (GNU Binutils) 2.20.1.20100303 > /usr/libexec/gcc/x86_64-pc-linux-gnu/4.4.5/collect2 --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/crtbegin.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -O1 --sort-common --as-needed /home/portage/portage/sci-libs/cholmod-1.7.3/temp/cc09RUMk.o -lgfortranbegin -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/crtend.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64/crtn.o >configure:15278: result: -v >configure:15280: checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran >configure:15303: x86_64-pc-linux-gnu-gfortran -o conftest -v -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.f -lm >Using built-in specs. >Target: x86_64-pc-linux-gnu >Thread model: posix >gcc version 4.4.5 (Gentoo 4.4.5 p1.0, pie-0.4.5) > /usr/libexec/gcc/x86_64-pc-linux-gnu/4.4.5/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -auxbase conftest -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/finclude -o /home/portage/portage/sci-libs/cholmod-1.7.3/temp/cc13a4iT.s >GNU Fortran (Gentoo 4.4.5 p1.0, pie-0.4.5) version 4.4.5 (x86_64-pc-linux-gnu) > compiled by GNU C version 4.4.5, GMP version 5.0.2, MPFR version 3.0.1. >warning: MPFR header version 3.0.1 differs from library version 3.0.1-p4. >GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 > /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/as -V -Qy -o /home/portage/portage/sci-libs/cholmod-1.7.3/temp/ccQrXMaB.o /home/portage/portage/sci-libs/cholmod-1.7.3/temp/cc13a4iT.s >GNU assembler version 2.20.1 (x86_64-pc-linux-gnu) using BFD version (GNU Binutils) 2.20.1.20100303 > /usr/libexec/gcc/x86_64-pc-linux-gnu/4.4.5/collect2 --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/crtbegin.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -O1 --sort-common --as-needed /home/portage/portage/sci-libs/cholmod-1.7.3/temp/ccQrXMaB.o -lgfortranbegin -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/crtend.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64/crtn.o >configure:15478: result: -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >configure:15494: checking for dummy main to link with Fortran 77 libraries >configure:15528: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >configure:15528: $? = 0 >configure:15573: result: none >configure:15606: checking for Fortran 77 name-mangling scheme >configure:15619: x86_64-pc-linux-gnu-gfortran -c conftest.f >&5 >configure:15619: $? = 0 >configure:15660: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/home/portage/portage/sci-libs/cholmod-1.7.3/temp/ccDfIUPj.o: In function `main': >conftest.c:(.text+0x7): undefined reference to `foobar' >collect2: ld returned 1 exit status >configure:15660: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char foobar (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return foobar (); >| ; >| return 0; >| } >configure:15660: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >configure:15660: $? = 0 >configure:15718: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >configure:15718: $? = 0 >configure:15760: result: lower case, underscore, no extra underscore >configure:15879: checking for sgemm_ >configure:15879: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/home/portage/portage/sci-libs/cholmod-1.7.3/temp/ccmgeIGV.o: In function `main': >conftest.c:(.text+0x7): undefined reference to `sgemm_' >collect2: ld returned 1 exit status >configure:15879: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| /* Define sgemm_ to an innocuous variant, in case <limits.h> declares sgemm_. >| For example, HP-UX 11i <limits.h> declares gettimeofday. */ >| #define sgemm_ innocuous_sgemm_ >| >| /* System header to define __stub macros and hopefully few prototypes, >| which can conflict with char sgemm_ (); below. >| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since >| <limits.h> exists even on freestanding compilers. */ >| >| #ifdef __STDC__ >| # include <limits.h> >| #else >| # include <assert.h> >| #endif >| >| #undef sgemm_ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| /* The GNU C library defines this for functions which it implements >| to always fail with ENOSYS. Some functions are actually named >| something starting with __ and the normal name is an alias. */ >| #if defined __stub_sgemm_ || defined __stub___sgemm_ >| choke me >| #endif >| >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:15879: result: no >configure:15889: checking for ATL_xerbla in -latlas >configure:15922: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -latlas -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -latlas >collect2: ld returned 1 exit status >configure:15922: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char ATL_xerbla (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return ATL_xerbla (); >| ; >| return 0; >| } >configure:15931: result: no >configure:16039: checking for sgemm_ in -lblas >configure:16072: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lblas -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >configure:16072: $? = 0 >configure:16082: result: yes >configure:16086: checking for dgemm_ in -ldgemm >configure:16119: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -ldgemm -lblas -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -ldgemm >collect2: ld returned 1 exit status >configure:16119: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char dgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return dgemm_ (); >| ; >| return 0; >| } >configure:16129: result: no >configure:16191: checking for sgemm_ in -lmkl >configure:16224: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lmkl -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lmkl >collect2: ld returned 1 exit status >configure:16224: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:16234: result: no >configure:16246: checking for sgemm_ >configure:16246: result: no >configure:16257: checking for sgemm_ in -lcxml >configure:16290: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lcxml -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lcxml >collect2: ld returned 1 exit status >configure:16290: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:16300: result: no >configure:16311: checking for sgemm_ in -ldxml >configure:16344: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -ldxml -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -ldxml >collect2: ld returned 1 exit status >configure:16344: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:16354: result: no >configure:16469: checking for sgemm_ in -lscs >configure:16502: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lscs -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lscs >collect2: ld returned 1 exit status >configure:16502: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:16512: result: no >configure:16523: checking for sgemm_ in -lcomplib.sgimath >configure:16556: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lcomplib.sgimath -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lcomplib.sgimath >collect2: ld returned 1 exit status >configure:16556: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:16566: result: no >configure:16577: checking for sgemm_ in -lblas >configure:16620: result: yes >configure:16624: checking for sgemm_ in -lessl >configure:16657: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lessl -lblas -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm -lm -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lessl >collect2: ld returned 1 exit status >configure:16657: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char sgemm_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return sgemm_ (); >| ; >| return 0; >| } >configure:16667: result: no >configure:16680: checking for sgemm_ in -lblas >configure:16723: result: yes >configure:16840: checking for cheev_ >configure:16840: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -lm -lblas -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm >&5 >/home/portage/portage/sci-libs/cholmod-1.7.3/temp/ccGyOJsf.o: In function `main': >conftest.c:(.text+0x7): undefined reference to `cheev_' >collect2: ld returned 1 exit status >configure:16840: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| #define HAVE_BLAS 1 >| /* end confdefs.h. */ >| /* Define cheev_ to an innocuous variant, in case <limits.h> declares cheev_. >| For example, HP-UX 11i <limits.h> declares gettimeofday. */ >| #define cheev_ innocuous_cheev_ >| >| /* System header to define __stub macros and hopefully few prototypes, >| which can conflict with char cheev_ (); below. >| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since >| <limits.h> exists even on freestanding compilers. */ >| >| #ifdef __STDC__ >| # include <limits.h> >| #else >| # include <assert.h> >| #endif >| >| #undef cheev_ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char cheev_ (); >| /* The GNU C library defines this for functions which it implements >| to always fail with ENOSYS. Some functions are actually named >| something starting with __ and the normal name is an alias. */ >| #if defined __stub_cheev_ || defined __stub___cheev_ >| choke me >| #endif >| >| int >| main () >| { >| return cheev_ (); >| ; >| return 0; >| } >configure:16840: result: no >configure:16853: checking for cheev_ in -llapack >configure:16886: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -llapack -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm -lblas -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -llapack >collect2: ld returned 1 exit status >configure:16886: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| #define HAVE_BLAS 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char cheev_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return cheev_ (); >| ; >| return 0; >| } >configure:16896: result: no >configure:16853: checking for cheev_ in -llapack_rs6k >configure:16886: x86_64-pc-linux-gnu-gcc -o conftest -O2 -pipe -march=native -Wl,-O1 -Wl,--sort-common -Wl,--as-needed conftest.c -llapack_rs6k -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm -lblas -lm >&5 >/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -llapack_rs6k >collect2: ld returned 1 exit status >configure:16886: $? = 1 >configure: failed program was: >| /* confdefs.h */ >| #define PACKAGE_NAME "cholmod" >| #define PACKAGE_TARNAME "cholmod" >| #define PACKAGE_VERSION "1.7.0" >| #define PACKAGE_STRING "cholmod 1.7.0" >| #define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >| #define PACKAGE_URL "" >| #define PACKAGE "cholmod" >| #define VERSION "1.7.0" >| #define STDC_HEADERS 1 >| #define HAVE_SYS_TYPES_H 1 >| #define HAVE_SYS_STAT_H 1 >| #define HAVE_STDLIB_H 1 >| #define HAVE_STRING_H 1 >| #define HAVE_MEMORY_H 1 >| #define HAVE_STRINGS_H 1 >| #define HAVE_INTTYPES_H 1 >| #define HAVE_STDINT_H 1 >| #define HAVE_UNISTD_H 1 >| #define HAVE_DLFCN_H 1 >| #define LT_OBJDIR ".libs/" >| #define HAVE_LIBM 1 >| #define HAVE_UFCONFIG_H 1 >| #define NPARTITION 1 >| #define HAVE_BLAS 1 >| /* end confdefs.h. */ >| >| /* Override any GCC internal prototype to avoid an error. >| Use char because int might match the return type of a GCC >| builtin and then its argument prototype would still apply. */ >| #ifdef __cplusplus >| extern "C" >| #endif >| char cheev_ (); >| #ifdef F77_DUMMY_MAIN >| >| # ifdef __cplusplus >| extern "C" >| # endif >| int F77_DUMMY_MAIN() { return 1; } >| >| #endif >| int >| main () >| { >| return cheev_ (); >| ; >| return 0; >| } >configure:16896: result: no >configure:16925: error: Cannot find lapack libraries > >## ---------------- ## >## Cache variables. ## >## ---------------- ## > >ac_cv_build=x86_64-pc-linux-gnu >ac_cv_c_compiler_gnu=yes >ac_cv_env_CC_set= >ac_cv_env_CC_value= >ac_cv_env_CFLAGS_set=set >ac_cv_env_CFLAGS_value='-O2 -pipe -march=native' >ac_cv_env_CPPFLAGS_set= >ac_cv_env_CPPFLAGS_value= >ac_cv_env_CPP_set= >ac_cv_env_CPP_value= >ac_cv_env_F77_set= >ac_cv_env_F77_value= >ac_cv_env_FFLAGS_set=set >ac_cv_env_FFLAGS_value= >ac_cv_env_LDFLAGS_set=set >ac_cv_env_LDFLAGS_value='-Wl,-O1 -Wl,--sort-common -Wl,--as-needed' >ac_cv_env_LIBS_set= >ac_cv_env_LIBS_value= >ac_cv_env_PKG_CONFIG_LIBDIR_set= >ac_cv_env_PKG_CONFIG_LIBDIR_value= >ac_cv_env_PKG_CONFIG_PATH_set=set >ac_cv_env_PKG_CONFIG_PATH_value=/usr/lib64/pkgconfig >ac_cv_env_PKG_CONFIG_set= >ac_cv_env_PKG_CONFIG_value= >ac_cv_env_build_alias_set=set >ac_cv_env_build_alias_value=x86_64-pc-linux-gnu >ac_cv_env_host_alias_set=set >ac_cv_env_host_alias_value=x86_64-pc-linux-gnu >ac_cv_env_metis_CFLAGS_set= >ac_cv_env_metis_CFLAGS_value= >ac_cv_env_metis_LIBS_set= >ac_cv_env_metis_LIBS_value= >ac_cv_env_target_alias_set= >ac_cv_env_target_alias_value= >ac_cv_f77_compiler_gnu=yes >ac_cv_f77_dummy_main=none >ac_cv_f77_libs=' -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm' >ac_cv_f77_mangling='lower case, underscore, no extra underscore' >ac_cv_fortran_dummy_main=none >ac_cv_func_cheev_=no >ac_cv_func_sgemm_=no >ac_cv_header_UFconfig_h=yes >ac_cv_header_dlfcn_h=yes >ac_cv_header_inttypes_h=yes >ac_cv_header_memory_h=yes >ac_cv_header_stdc=yes >ac_cv_header_stdint_h=yes >ac_cv_header_stdlib_h=yes >ac_cv_header_string_h=yes >ac_cv_header_strings_h=yes >ac_cv_header_sys_stat_h=yes >ac_cv_header_sys_types_h=yes >ac_cv_header_unistd_h=yes >ac_cv_host=x86_64-pc-linux-gnu >ac_cv_lib_atlas_ATL_xerbla=no >ac_cv_lib_blas_sgemm_=yes >ac_cv_lib_complib_sgimath_sgemm_=no >ac_cv_lib_cxml_sgemm_=no >ac_cv_lib_dgemm_dgemm_=no >ac_cv_lib_dxml_sgemm_=no >ac_cv_lib_essl_sgemm_=no >ac_cv_lib_lapack___cheev_=no >ac_cv_lib_lapack_rs6k___cheev_=no >ac_cv_lib_m_sqrt=yes >ac_cv_lib_mkl_sgemm_=no >ac_cv_lib_scs_sgemm_=no >ac_cv_objext=o >ac_cv_path_EGREP='/bin/grep -E' >ac_cv_path_FGREP='/bin/grep -F' >ac_cv_path_GREP=/bin/grep >ac_cv_path_SED=/bin/sed >ac_cv_path_install='/usr/bin/install -c' >ac_cv_path_mkdir=/bin/mkdir >ac_cv_prog_AR=x86_64-pc-linux-gnu-ar >ac_cv_prog_AWK=gawk >ac_cv_prog_CC=x86_64-pc-linux-gnu-gcc >ac_cv_prog_CPP='x86_64-pc-linux-gnu-gcc -E' >ac_cv_prog_F77=x86_64-pc-linux-gnu-gfortran >ac_cv_prog_OBJDUMP=x86_64-pc-linux-gnu-objdump >ac_cv_prog_RANLIB=x86_64-pc-linux-gnu-ranlib >ac_cv_prog_STRIP=x86_64-pc-linux-gnu-strip >ac_cv_prog_cc_c89= >ac_cv_prog_cc_g=yes >ac_cv_prog_f77_g=yes >ac_cv_prog_f77_v=-v >ac_cv_prog_make_make_set=yes >am_cv_CC_dependencies_compiler_type=gcc3 >lt_cv_ar_at_file=@ >lt_cv_archive_cmds_need_lc=no >lt_cv_deplibs_check_method=pass_all >lt_cv_file_magic_cmd='$MAGIC_CMD' >lt_cv_file_magic_test_file= >lt_cv_ld_reload_flag=-r >lt_cv_nm_interface='BSD nm' >lt_cv_objdir=.libs >lt_cv_path_LD=/usr/x86_64-pc-linux-gnu/bin/ld >lt_cv_path_NM='/usr/bin/nm -B' >lt_cv_path_mainfest_tool=no >lt_cv_prog_compiler_c_o=yes >lt_cv_prog_compiler_c_o_F77=yes >lt_cv_prog_compiler_pic='-fPIC -DPIC' >lt_cv_prog_compiler_pic_F77=-fPIC >lt_cv_prog_compiler_pic_works=yes >lt_cv_prog_compiler_pic_works_F77=yes >lt_cv_prog_compiler_rtti_exceptions=no >lt_cv_prog_compiler_static_works=yes >lt_cv_prog_compiler_static_works_F77=yes >lt_cv_prog_gnu_ld=yes >lt_cv_sharedlib_from_linklib_cmd='printf %s\n' >lt_cv_shlibpath_overrides_runpath=yes >lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' >lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' >lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' >lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' >lt_cv_sys_max_cmd_len=1572864 >lt_cv_to_host_file_cmd=func_convert_file_noop >lt_cv_to_tool_file_cmd=func_convert_file_noop > >## ----------------- ## >## Output variables. ## >## ----------------- ## > >ACLOCAL='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/missing --run aclocal-1.11' >AMDEPBACKSLASH='\' >AMDEP_FALSE='#' >AMDEP_TRUE='' >AMTAR='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/missing --run tar' >AR='x86_64-pc-linux-gnu-ar' >AUTOCONF='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/missing --run autoconf' >AUTOHEADER='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/missing --run autoheader' >AUTOMAKE='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/missing --run automake-1.11' >AWK='gawk' >BLAS_LIBS='-lblas' >CC='x86_64-pc-linux-gnu-gcc' >CCDEPMODE='depmode=gcc3' >CFLAGS='-O2 -pipe -march=native' >CPP='x86_64-pc-linux-gnu-gcc -E' >CPPFLAGS='' >CYGPATH_W='echo' >DEFS='' >DEPDIR='.deps' >DLLTOOL='false' >DSYMUTIL='' >DUMPBIN='' >ECHO_C='' >ECHO_N='-n' >ECHO_T='' >EGREP='/bin/grep -E' >EXEEXT='' >F77='x86_64-pc-linux-gnu-gfortran' >FFLAGS='' >FGREP='/bin/grep -F' >FLIBS=' -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.5/../../.. -lgfortranbegin -lgfortran -lm' >GREP='/bin/grep' >INSTALL_DATA='${INSTALL} -m 644' >INSTALL_PROGRAM='${INSTALL}' >INSTALL_SCRIPT='${INSTALL}' >INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' >LAPACK_LIBS='' >LD='/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64' >LDFLAGS='-Wl,-O1 -Wl,--sort-common -Wl,--as-needed' >LIBOBJS='' >LIBS='-lm ' >LIBTOOL='$(SHELL) $(top_builddir)/libtool' >LIPO='' >LN_S='ln -s' >LTLIBOBJS='' >MAKEINFO='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/missing --run makeinfo' >MANIFEST_TOOL=':' >MKDIR_P='/bin/mkdir -p' >MODULES=' Check Cholesky MatrixOps Modify Supernodal' >MOD_CHECK_FALSE='' >MOD_CHECK_TRUE='' >MOD_CHOLESKY_FALSE='' >MOD_CHOLESKY_TRUE='' >MOD_MATRIXOPS_FALSE='' >MOD_MATRIXOPS_TRUE='' >MOD_MODIFY_FALSE='' >MOD_MODIFY_TRUE='' >MOD_PARTITION_FALSE='' >MOD_PARTITION_TRUE='' >MOD_SUPERNODAL_FALSE='' >MOD_SUPERNODAL_TRUE='' >NM='/usr/bin/nm -B' >NMEDIT='' >OBJDUMP='x86_64-pc-linux-gnu-objdump' >OBJEXT='o' >OTOOL64='' >OTOOL='' >PACKAGE='cholmod' >PACKAGE_BUGREPORT='davis@cise.ufl.edu' >PACKAGE_NAME='cholmod' >PACKAGE_STRING='cholmod 1.7.0' >PACKAGE_TARNAME='cholmod' >PACKAGE_URL='' >PACKAGE_VERSION='1.7.0' >PATH_SEPARATOR=':' >PKG_CONFIG='' >PKG_CONFIG_LIBDIR='' >PKG_CONFIG_PATH='/usr/lib64/pkgconfig' >RANLIB='x86_64-pc-linux-gnu-ranlib' >SED='/bin/sed' >SET_MAKE='' >SHELL='/bin/sh' >STRIP='x86_64-pc-linux-gnu-strip' >VERSION='1.7.0' >ac_ct_AR='' >ac_ct_CC='' >ac_ct_DUMPBIN='' >ac_ct_F77='' >am__EXEEXT_FALSE='' >am__EXEEXT_TRUE='' >am__fastdepCC_FALSE='#' >am__fastdepCC_TRUE='' >am__include='include' >am__isrc='' >am__leading_dot='.' >am__quote='' >am__tar='${AMTAR} chof - "$$tardir"' >am__untar='${AMTAR} xf -' >bindir='${exec_prefix}/bin' >build='x86_64-pc-linux-gnu' >build_alias='x86_64-pc-linux-gnu' >build_cpu='x86_64' >build_os='linux-gnu' >build_vendor='pc' >datadir='/usr/share' >datarootdir='${prefix}/share' >docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' >dvidir='${docdir}' >exec_prefix='NONE' >host='x86_64-pc-linux-gnu' >host_alias='x86_64-pc-linux-gnu' >host_cpu='x86_64' >host_os='linux-gnu' >host_vendor='pc' >htmldir='${docdir}' >includedir='${prefix}/include' >infodir='/usr/share/info' >install_sh='${SHELL} /home/portage/portage/sci-libs/cholmod-1.7.3/work/CHOLMOD/install-sh' >libdir='/usr/lib64' >libexecdir='${exec_prefix}/libexec' >localedir='${datarootdir}/locale' >localstatedir='/var/lib' >mandir='/usr/share/man' >metis_CFLAGS='' >metis_LIBS='' >mkdir_p='/bin/mkdir -p' >oldincludedir='/usr/include' >pdfdir='${docdir}' >prefix='/usr' >program_transform_name='s,x,x,' >psdir='${docdir}' >sbindir='${exec_prefix}/sbin' >sharedstatedir='${prefix}/com' >sysconfdir='/etc' >target_alias='' > >## ----------- ## >## confdefs.h. ## >## ----------- ## > >/* confdefs.h */ >#define PACKAGE_NAME "cholmod" >#define PACKAGE_TARNAME "cholmod" >#define PACKAGE_VERSION "1.7.0" >#define PACKAGE_STRING "cholmod 1.7.0" >#define PACKAGE_BUGREPORT "davis@cise.ufl.edu" >#define PACKAGE_URL "" >#define PACKAGE "cholmod" >#define VERSION "1.7.0" >#define STDC_HEADERS 1 >#define HAVE_SYS_TYPES_H 1 >#define HAVE_SYS_STAT_H 1 >#define HAVE_STDLIB_H 1 >#define HAVE_STRING_H 1 >#define HAVE_MEMORY_H 1 >#define HAVE_STRINGS_H 1 >#define HAVE_INTTYPES_H 1 >#define HAVE_STDINT_H 1 >#define HAVE_UNISTD_H 1 >#define HAVE_DLFCN_H 1 >#define LT_OBJDIR ".libs/" >#define HAVE_LIBM 1 >#define HAVE_UFCONFIG_H 1 >#define NPARTITION 1 >#define HAVE_BLAS 1 > >configure: exit 1
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