* Package: sci-chemistry/openbabel-2.2.3  * Repository: gentoo  * Maintainer: sci-chemistry@gentoo.org  * USE: elibc_glibc kernel_linux python userland_GNU x86 >>> Unpacking source... >>> Unpacking openbabel-2.2.3.tar.gz to /var/tmp/portage/sci-chemistry/openbabel-2.2.3/work >>> Source unpacked in /var/tmp/portage/sci-chemistry/openbabel-2.2.3/work >>> Preparing source in /var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3 ... * Applying openbabel-2.2.0-doxyfile.patch ...  [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3 ... * econf: updating openbabel-2.2.3/config.guess with /usr/share/gnuconfig/config.guess * econf: updating openbabel-2.2.3/config.sub with /usr/share/gnuconfig/config.sub ./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking auto silent in maintainer mode... auto-sleep-9 checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for style of include used by make... 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config.status: creating src/Makefile config.status: creating src/math/Makefile config.status: creating src/formats/Makefile config.status: creating src/fingerprints/Makefile config.status: creating src/formats/xml/Makefile config.status: creating src/formats/inchi102/Makefile config.status: creating src/forcefields/Makefile config.status: creating src/GUI/Makefile config.status: creating src/descriptors/Makefile config.status: creating src/ops/Makefile config.status: creating include/Makefile config.status: creating include/openbabel/Makefile config.status: creating include/openbabel/math/Makefile config.status: creating test/Makefile config.status: creating test/cmltest/Makefile config.status: creating tools/Makefile config.status: creating doc/Makefile config.status: creating scripts/Makefile config.status: creating openbabel-2.0.pc config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing include/openbabel/babelconfig.h commands >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3 ... make -j1 Making all in data make[1]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/data' make all-am make[2]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/data' make[2]: Nie ma nic do zrobienia w `all-am'. make[2]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/data' make[1]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/data' Making all in src make[1]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src' make all-recursive make[2]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src' Making all in math make[3]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/math' /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT matrix3x3.lo -MD -MP -MF .deps/matrix3x3.Tpo -c -o matrix3x3.lo matrix3x3.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT matrix3x3.lo -MD -MP -MF .deps/matrix3x3.Tpo -c matrix3x3.cpp -fPIC -DPIC -o .libs/matrix3x3.o mv -f .deps/matrix3x3.Tpo .deps/matrix3x3.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT vector3.lo -MD -MP -MF .deps/vector3.Tpo -c -o vector3.lo vector3.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native 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-I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT spacegroup.lo -MD -MP -MF .deps/spacegroup.Tpo -c spacegroup.cpp -fPIC -DPIC -o .libs/spacegroup.o mv -f .deps/spacegroup.Tpo .deps/spacegroup.Plo /bin/sh ../../libtool --tag=CXX --mode=link i686-pc-linux-gnu-g++ -O2 -pipe -march=native -Wl,--hash-style=gnu,-O1 -Wl,--as-needed -o libmath.la matrix3x3.lo vector3.lo transform3d.lo spacegroup.lo -lz -lm libtool: link: i686-pc-linux-gnu-ar cru .libs/libmath.a .libs/matrix3x3.o .libs/vector3.o .libs/transform3d.o .libs/spacegroup.o libtool: link: i686-pc-linux-gnu-ranlib .libs/libmath.a libtool: link: ( cd ".libs" && rm -f "libmath.la" && ln -s "../libmath.la" "libmath.la" ) make[3]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/math' Making all in fingerprints make[3]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/fingerprints' /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT finger2.lo -MD -MP -MF .deps/finger2.Tpo -c -o finger2.lo finger2.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT finger2.lo -MD -MP -MF .deps/finger2.Tpo -c finger2.cpp -fPIC -DPIC -o .libs/finger2.o mv -f .deps/finger2.Tpo .deps/finger2.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT finger3.lo -MD -MP -MF .deps/finger3.Tpo -c -o finger3.lo finger3.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT finger3.lo -MD -MP -MF .deps/finger3.Tpo -c finger3.cpp -fPIC -DPIC -o .libs/finger3.o mv -f .deps/finger3.Tpo .deps/finger3.Plo /bin/sh ../../libtool --tag=CXX --mode=link i686-pc-linux-gnu-g++ -O2 -pipe -march=native -Wl,--hash-style=gnu,-O1 -Wl,--as-needed -o libfingerprints.la finger2.lo finger3.lo -lz -lm libtool: link: i686-pc-linux-gnu-ar cru .libs/libfingerprints.a .libs/finger2.o .libs/finger3.o libtool: link: i686-pc-linux-gnu-ranlib .libs/libfingerprints.a libtool: link: ( cd ".libs" && rm -f "libfingerprints.la" && ln -s "../libfingerprints.la" "libfingerprints.la" ) make[3]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/fingerprints' Making all in forcefields make[3]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/forcefields' /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../include -O2 -pipe -march=native -MT forcefieldghemical.lo -MD -MP -MF .deps/forcefieldghemical.Tpo -c -o forcefieldghemical.lo forcefieldghemical.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../include -O2 -pipe -march=native -MT forcefieldghemical.lo -MD -MP -MF .deps/forcefieldghemical.Tpo -c forcefieldghemical.cpp -fPIC -DPIC -o .libs/forcefieldghemical.o mv -f .deps/forcefieldghemical.Tpo .deps/forcefieldghemical.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../include -O2 -pipe -march=native -MT forcefieldmmff94.lo -MD -MP -MF .deps/forcefieldmmff94.Tpo -c -o forcefieldmmff94.lo forcefieldmmff94.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../include -O2 -pipe -march=native -MT forcefieldmmff94.lo -MD -MP -MF .deps/forcefieldmmff94.Tpo -c forcefieldmmff94.cpp -fPIC -DPIC -o .libs/forcefieldmmff94.o mv -f .deps/forcefieldmmff94.Tpo .deps/forcefieldmmff94.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../include -O2 -pipe -march=native -MT forcefielduff.lo -MD -MP -MF .deps/forcefielduff.Tpo -c -o forcefielduff.lo forcefielduff.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../include -O2 -pipe -march=native -MT forcefielduff.lo -MD -MP -MF .deps/forcefielduff.Tpo -c forcefielduff.cpp -fPIC -DPIC -o .libs/forcefielduff.o mv -f .deps/forcefielduff.Tpo .deps/forcefielduff.Plo /bin/sh ../../libtool --tag=CXX --mode=link i686-pc-linux-gnu-g++ -O2 -pipe -march=native -Wl,--hash-style=gnu,-O1 -Wl,--as-needed -o libforcefields.la forcefieldghemical.lo forcefieldmmff94.lo forcefielduff.lo -lz -lm libtool: link: i686-pc-linux-gnu-ar cru .libs/libforcefields.a .libs/forcefieldghemical.o .libs/forcefieldmmff94.o .libs/forcefielduff.o libtool: link: i686-pc-linux-gnu-ranlib .libs/libforcefields.a libtool: link: ( cd ".libs" && rm -f "libforcefields.la" && ln -s "../libforcefields.la" "libforcefields.la" ) make[3]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/forcefields' Making all in descriptors make[3]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/descriptors' /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT cmpdfilter.lo -MD -MP -MF .deps/cmpdfilter.Tpo -c -o cmpdfilter.lo cmpdfilter.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT cmpdfilter.lo -MD -MP -MF .deps/cmpdfilter.Tpo -c cmpdfilter.cpp -fPIC -DPIC -o .libs/cmpdfilter.o mv -f .deps/cmpdfilter.Tpo .deps/cmpdfilter.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT filters.lo -MD -MP -MF .deps/filters.Tpo -c -o filters.lo filters.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT filters.lo -MD -MP -MF .deps/filters.Tpo -c filters.cpp -fPIC -DPIC -o .libs/filters.o mv -f .deps/filters.Tpo .deps/filters.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT groupcontrib.lo -MD -MP -MF .deps/groupcontrib.Tpo -c -o groupcontrib.lo groupcontrib.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT groupcontrib.lo -MD -MP -MF .deps/groupcontrib.Tpo -c groupcontrib.cpp -fPIC -DPIC -o .libs/groupcontrib.o mv -f .deps/groupcontrib.Tpo .deps/groupcontrib.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT smartsdescriptors.lo -MD -MP -MF .deps/smartsdescriptors.Tpo -c -o smartsdescriptors.lo smartsdescriptors.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT smartsdescriptors.lo -MD -MP -MF .deps/smartsdescriptors.Tpo -c smartsdescriptors.cpp -fPIC -DPIC -o .libs/smartsdescriptors.o mv -f .deps/smartsdescriptors.Tpo .deps/smartsdescriptors.Plo /bin/sh ../../libtool --tag=CXX --mode=link i686-pc-linux-gnu-g++ -O2 -pipe -march=native -Wl,--hash-style=gnu,-O1 -Wl,--as-needed -o libdescriptors.la cmpdfilter.lo filters.lo groupcontrib.lo smartsdescriptors.lo -lz -lm libtool: link: i686-pc-linux-gnu-ar cru .libs/libdescriptors.a .libs/cmpdfilter.o .libs/filters.o .libs/groupcontrib.o .libs/smartsdescriptors.o libtool: link: i686-pc-linux-gnu-ranlib .libs/libdescriptors.a libtool: link: ( cd ".libs" && rm -f "libdescriptors.la" && ln -s "../libdescriptors.la" "libdescriptors.la" ) make[3]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/descriptors' Making all in ops make[3]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/ops' /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT addpolarh.lo -MD -MP -MF .deps/addpolarh.Tpo -c -o addpolarh.lo addpolarh.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT addpolarh.lo -MD -MP -MF .deps/addpolarh.Tpo -c addpolarh.cpp -fPIC -DPIC -o .libs/addpolarh.o mv -f .deps/addpolarh.Tpo .deps/addpolarh.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT gen3d.lo -MD -MP -MF .deps/gen3d.Tpo -c -o gen3d.lo gen3d.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT gen3d.lo -MD -MP -MF .deps/gen3d.Tpo -c gen3d.cpp -fPIC -DPIC -o .libs/gen3d.o mv -f .deps/gen3d.Tpo .deps/gen3d.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT loader.lo -MD -MP -MF .deps/loader.Tpo -c -o loader.lo loader.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT loader.lo -MD -MP -MF .deps/loader.Tpo -c loader.cpp -fPIC -DPIC -o .libs/loader.o mv -f .deps/loader.Tpo .deps/loader.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT optransform.lo -MD -MP -MF .deps/optransform.Tpo -c -o optransform.lo optransform.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT optransform.lo -MD -MP -MF .deps/optransform.Tpo -c optransform.cpp -fPIC -DPIC -o .libs/optransform.o mv -f .deps/optransform.Tpo .deps/optransform.Plo /bin/sh ../../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT fillUC.lo -MD -MP -MF .deps/fillUC.Tpo -c -o fillUC.lo fillUC.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../../src -I../../include -I../../src -I../../include -O2 -pipe -march=native -MT fillUC.lo -MD -MP -MF .deps/fillUC.Tpo -c fillUC.cpp -fPIC -DPIC -o .libs/fillUC.o mv -f .deps/fillUC.Tpo .deps/fillUC.Plo /bin/sh ../../libtool --tag=CXX --mode=link i686-pc-linux-gnu-g++ -O2 -pipe -march=native -Wl,--hash-style=gnu,-O1 -Wl,--as-needed -o libops.la addpolarh.lo gen3d.lo loader.lo optransform.lo fillUC.lo -lz -lm libtool: link: i686-pc-linux-gnu-ar cru .libs/libops.a .libs/addpolarh.o .libs/gen3d.o .libs/loader.o .libs/optransform.o .libs/fillUC.o libtool: link: i686-pc-linux-gnu-ranlib .libs/libops.a libtool: link: ( cd ".libs" && rm -f "libops.la" && ln -s "../libops.la" "libops.la" ) make[3]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src/ops' Making all in . make[3]: Wejście do katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src' /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c -o atom.lo atom.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c atom.cpp -fPIC -DPIC -o .libs/atom.o mv -f .deps/atom.Tpo .deps/atom.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT alias.lo -MD -MP -MF .deps/alias.Tpo -c -o alias.lo alias.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT alias.lo -MD -MP -MF .deps/alias.Tpo -c alias.cpp -fPIC -DPIC -o .libs/alias.o mv -f .deps/alias.Tpo .deps/alias.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT base.lo -MD -MP -MF .deps/base.Tpo -c -o base.lo base.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT base.lo -MD -MP -MF .deps/base.Tpo -c base.cpp -fPIC -DPIC -o .libs/base.o mv -f .deps/base.Tpo .deps/base.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT bitvec.lo -MD -MP -MF .deps/bitvec.Tpo -c -o bitvec.lo bitvec.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT bitvec.lo -MD -MP -MF .deps/bitvec.Tpo -c bitvec.cpp -fPIC -DPIC -o .libs/bitvec.o mv -f .deps/bitvec.Tpo .deps/bitvec.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT bond.lo -MD -MP -MF .deps/bond.Tpo -c -o bond.lo bond.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT bond.lo -MD -MP -MF .deps/bond.Tpo -c bond.cpp -fPIC -DPIC -o .libs/bond.o mv -f .deps/bond.Tpo .deps/bond.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT bondtyper.lo -MD -MP -MF .deps/bondtyper.Tpo -c -o bondtyper.lo bondtyper.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT bondtyper.lo -MD -MP -MF .deps/bondtyper.Tpo -c bondtyper.cpp -fPIC -DPIC -o .libs/bondtyper.o mv -f .deps/bondtyper.Tpo .deps/bondtyper.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT canon.lo -MD -MP -MF .deps/canon.Tpo -c -o canon.lo canon.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT canon.lo -MD -MP -MF .deps/canon.Tpo -c canon.cpp -fPIC -DPIC -o .libs/canon.o mv -f .deps/canon.Tpo .deps/canon.Plo /bin/sh ../libtool --tag=CXX --mode=compile i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT builder.lo -MD -MP -MF .deps/builder.Tpo -c -o builder.lo builder.cpp libtool: compile: i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../include -I../data/ -I../include -DOB_MODULE_PATH=\"/usr/lib/openbabel/2.2.3\" -DUSING_DYNAMIC_LIBS -O2 -pipe -march=native -MT builder.lo -MD -MP -MF .deps/builder.Tpo -c builder.cpp -fPIC -DPIC -o .libs/builder.o In file included from ../include/openbabel/rotamer.h:27:0, from builder.cpp:29: ../include/openbabel/rotor.h:408:3: error: expected ‘;’ after class definition ../include/openbabel/rotor.h:408:13: error: declaration does not declare anything [-fpermissive] make[3]: *** [builder.lo] Błąd 1 make[3]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src' make[2]: *** [all-recursive] Błąd 1 make[2]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src' make[1]: *** [all] Błąd 2 make[1]: Opuszczenie katalogu `/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3/src' make: *** [all-recursive] Błąd 1 emake failed * ERROR: sci-chemistry/openbabel-2.2.3 failed: * emake failed * * Call stack: * ebuild.sh, line 56: Called src_compile * environment, line 4728: Called die * The specific snippet of code: * emake || die "emake failed"; * * If you need support, post the output of 'emerge --info =sci-chemistry/openbabel-2.2.3', * the complete build log and the output of 'emerge -pqv =sci-chemistry/openbabel-2.2.3'. * The complete build log is located at '/var/tmp/portage/sci-chemistry/openbabel-2.2.3/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/openbabel-2.2.3/temp/environment'. * S: '/var/tmp/portage/sci-chemistry/openbabel-2.2.3/work/openbabel-2.2.3'