Build log

eden-5.3:20100915-181022.log (text/plain), 8.90 KB, created by Diego Elio Pettenò (RETIRED) on 2010-09-15 20:38:54 UTC

 * CPV:  sci-chemistry/eden-5.3
 * REPO: gentoo
 * Maintainer: [e-mail]
 * USE:  elibc_glibc kernel_linux test userland_GNU x86
>>> Unpacking source...
>>> Unpacking eden_V5.3.tar.gz to /var/tmp/portage/sci-chemistry/eden-5.3/work
 * Applying makefile-fixes.patch ...
 [ ok ]
>>> Source unpacked in /var/tmp/portage/sci-chemistry/eden-5.3/work
>>> Compiling source in /var/tmp/portage/sci-chemistry/eden-5.3/work/eden ...
make -j14 CC=i686-pc-linux-gnu-gcc 
i686-pc-linux-gnu-gcc -O2 -pipe -c eden.c
i686-pc-linux-gnu-gcc -O2 -pipe -c addmaps.c
i686-pc-linux-gnu-gcc -O2 -pipe -c apodfc.c
i686-pc-linux-gnu-gcc -O2 -pipe -c apodfo.c
i686-pc-linux-gnu-gcc -O2 -pipe -c back.c
i686-pc-linux-gnu-gcc -O2 -pipe -c cadhkl.c
i686-pc-linux-gnu-gcc -O2 -pipe -c convert.c
i686-pc-linux-gnu-gcc -O2 -pipe -c count.c
i686-pc-linux-gnu-gcc -O2 -pipe -c distance.c
i686-pc-linux-gnu-gcc -O2 -pipe -c dphase.c
i686-pc-linux-gnu-gcc -O2 -pipe -c expandfc.c
i686-pc-linux-gnu-gcc -O2 -pipe -c expandfo.c
i686-pc-linux-gnu-gcc -O2 -pipe -c forth.c
eden.c: In function ‘main’:
eden.c:322:6: warning: format not a string literal and no format arguments
i686-pc-linux-gnu-gcc -O2 -pipe -c maketar.c
back.c: In function ‘back_main’:
back.c:115:4: warning: format not a string literal and no format arguments
count.c: In function ‘print_el_count’:
count.c:463:6: warning: format not a string literal and no format arguments
count.c:468:6: warning: format not a string literal and no format arguments
i686-pc-linux-gnu-gcc -O2 -pipe -c perturbhkl.c
convert.c: In function ‘readXmap’:
convert.c:293:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
convert.c:301:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
convert.c:305:19: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
convert.c: In function ‘readXmap_header’:
convert.c:239:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
convert.c:245:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
convert.c:258:11: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
convert.c:261:11: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
i686-pc-linux-gnu-gcc -O2 -pipe -c ranphase.c
i686-pc-linux-gnu-gcc -O2 -pipe -c refine.c
i686-pc-linux-gnu-gcc -O2 -pipe -c regrid.c
i686-pc-linux-gnu-gcc -O2 -pipe -c shapes.c
i686-pc-linux-gnu-gcc -O2 -pipe -c solve.c
i686-pc-linux-gnu-gcc -O2 -pipe -c sym.c
i686-pc-linux-gnu-gcc -O2 -pipe -c tohu.c
i686-pc-linux-gnu-gcc -O2 -pipe -c variance.c
i686-pc-linux-gnu-gcc -O2 -pipe -c apodutil.c
i686-pc-linux-gnu-gcc -O2 -pipe -c basics.c
refine.c: In function ‘write_pdb’:
refine.c:958:9: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
refine.c:960:9: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
refine.c: In function ‘read_xplor’:
refine.c:161:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:162:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:163:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:165:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:171:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:205:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:251:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
refine.c:258:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
i686-pc-linux-gnu-gcc -O2 -pipe -c calc_rho.c
i686-pc-linux-gnu-gcc -O2 -pipe -c ccg.c
i686-pc-linux-gnu-gcc -O2 -pipe -c ccgutil.c
i686-pc-linux-gnu-gcc -O2 -pipe -c concosts.c
apodutil.c: In function ‘scale_fo’:
apodutil.c:960:15: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
apodutil.c:963:15: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
apodutil.c: In function ‘show_wilson_plots’:
apodutil.c:749:17: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
i686-pc-linux-gnu-gcc -O2 -pipe -c cost.c
i686-pc-linux-gnu-gcc -O2 -pipe -c crysutil.c
i686-pc-linux-gnu-gcc -O2 -pipe -c fftwshare.c
concosts.c: In function ‘prepare_singlets’:
concosts.c:455:23: warning: format not a string literal and no format arguments
concosts.c: In function ‘prepare_triplets’:
concosts.c:559:4: warning: format not a string literal and no format arguments
calc_rho.c: In function ‘fill_ff_tables’:
calc_rho.c:103:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:103:58: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:107:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:113:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:122:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:132:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:135:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:138:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:139:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:140:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
calc_rho.c:142:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result
i686-pc-linux-gnu-gcc -O2 -pipe -c highres.c
i686-pc-linux-gnu-gcc -O2 -pipe -c hklinit.c
i686-pc-linux-gnu-gcc -O2 -pipe -c hklread.c
i686-pc-linux-gnu-gcc -O2 -pipe -c hklutil.c
i686-pc-linux-gnu-gcc -O2 -pipe -c init.c
i686-pc-linux-gnu-gcc -O2 -pipe -c pdbutil.c
i686-pc-linux-gnu-gcc -O2 -pipe -c qshare.c
i686-pc-linux-gnu-gcc -O2 -pipe -c regutil.c
pdbutil.c: In function ‘writePdbInfo’:
pdbutil.c:497:12: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
pdbutil.c:499:17: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result
pdbutil.c:501:17: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
i686-pc-linux-gnu-gcc -O2 -pipe -c remap.c
i686-pc-linux-gnu-gcc -O2 -pipe -c ssetup.c
i686-pc-linux-gnu-gcc -O2 -pipe -c util.c
i686-pc-linux-gnu-gcc -o fbyteswap fbyteswap.c
util.c: In function ‘prompt’:
util.c:269:5: warning: format not a string literal and no format arguments
util.c: In function ‘start_record’:
util.c:725:6: warning: format not a string literal and no format arguments
util.c: In function ‘filelength’:
util.c:360:12: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
util.c:362:17: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result
util.c:364:17: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
util.c: In function ‘help’:
util.c:236:20: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result
i686-pc-linux-gnu-gcc  eden.o addmaps.o apodfc.o apodfo.o back.o cadhkl.o convert.o count.o distance.o dphase.o expandfc.o expandfo.o forth.o maketar.o perturbhkl.o ranphase.o refine.o regrid.o shapes.o solve.o sym.o tohu.o variance.o apodutil.o basics.o calc_rho.o ccg.o ccgutil.o concosts.o cost.o crysutil.o fftwshare.o highres.o hklinit.o hklread.o hklutil.o init.o pdbutil.o qshare.o regutil.o remap.o ssetup.o util.o -L/usr/lib -lsfftw -lm   -g -lgsl -lgslcblas  -o eden
>>> Source compiled.
>>> Test phase [none]: sci-chemistry/eden-5.3

>>> Install eden-5.3 into /var/tmp/portage/sci-chemistry/eden-5.3/image/ category sci-chemistry
 * Tinderbox QA Notice: 'make' called by src_install
make -j14 install 
mv fbyteswap /var/tmp/portage/sci-chemistry/eden-5.3/image/usr/bin
mv eden /var/tmp/portage/sci-chemistry/eden-5.3/image/usr/bin/seden
chmod 751 /var/tmp/portage/sci-chemistry/eden-5.3/image/usr/bin/seden
>>> Completed installing eden-5.3 into /var/tmp/portage/sci-chemistry/eden-5.3/image/

strip: i686-pc-linux-gnu-strip --strip-unneeded -R .comment
   usr/bin/seden
   usr/bin/fbyteswap

 * QA Notice: Files built without respecting LDFLAGS have been detected
 *  Please include the following list of files in your report:
 * /usr/bin/seden
 * /usr/bin/fbyteswap