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Gentoo's Bugzilla – Attachment 246601 Details for
Bug 336604
sci-geosciences/gmt _FORTIFY_SOURCE indicates presence of overflow
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Build log
gmt-4.5.0-r2:20100909-102458.log (text/plain), 40.82 KB, created by
Diego Elio Pettenò (RETIRED)
on 2010-09-09 14:45:52 UTC
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hide
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Description:
Build log
Filename:
MIME Type:
Creator:
Diego Elio Pettenò (RETIRED)
Created:
2010-09-09 14:45:52 UTC
Size:
40.82 KB
patch
obsolete
> * CPV: sci-geosciences/gmt-4.5.0-r2 > * REPO: gentoo > * Maintainer: sci-geosciences@gentoo.org > * USE: elibc_glibc kernel_linux test userland_GNU x86 >>>> Unpacking source... >>>> Unpacking GMT4.5.0_src.tar.bz2 to /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work >>>> Unpacking GMT4.5.0_share.tar.bz2 to /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work >>>> Unpacking GSHHS2.0_coast.tar.bz2 to /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work > * Applying gmt-4.5.0-no-strip.patch ... > [ ok ] >>>> Source unpacked in /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work >>>> Compiling source in /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0 ... > * econf: updating GMT4.5.0/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating GMT4.5.0/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib/gmt-4.5.0 --includedir=/usr/include/gmt-4.5.0 --datadir=/usr/share/gmt-4.5.0 >configure: loading site script /usr/share/config.site >configure: loading site script /usr/share/crossdev/include/site/linux >checking build system type... i686-pc-linux-gnu >checking host system type... i686-pc-linux-gnu >checking target system type... i686-pc-linux-gnu >checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc >checking for C compiler default output file name... a.out >checking whether the C compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether i686-pc-linux-gnu-gcc accepts -g... yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E >checking for X... libraries , headers >checking for gethostbyname... yes >checking for connect... yes >checking for remove... yes >checking for shmat... yes >checking for IceConnectionNumber in -lICE... yes >checking for less... /usr/bin/less >checking for ar... ar >checking for csh... csh >checking for ld... ld >checking for as... as >checking whether ln -s works... yes >checking for a BSD-compatible install... /usr/bin/install -c >checking for gawk... gawk >checking for i686-pc-linux-gnu-ranlib... i686-pc-linux-gnu-ranlib >checking for an ANSI C-conforming const... yes >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for uid_t in sys/types.h... yes >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for int16_t... yes >checking for int32_t... yes >checking for size_t... yes >checking whether time.h and sys/time.h may both be included... yes >checking whether struct tm is in sys/time.h or time.h... time.h >checking for uint16_t... yes >checking for uint32_t... yes >checking for ptrdiff_t... yes >checking for dirent.h that defines DIR... yes >checking for library containing opendir... none required >checking for ANSI C header files... (cached) yes >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking float.h usability... yes >checking float.h presence... yes >checking for float.h... yes >checking limits.h usability... yes >checking limits.h presence... yes >checking for limits.h... yes >checking stddef.h usability... yes >checking stddef.h presence... yes >checking for stddef.h... yes >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking termios.h usability... yes >checking termios.h presence... yes >checking for termios.h... yes >checking for library containing sin... -lm >checking for library containing sincos... none required >checking for a broken sincos function... no >checking for unistd.h... (cached) yes >checking for working chown... yes >checking whether closedir returns void... no >checking for stdlib.h... (cached) yes >checking for GNU libc compatible malloc... yes >checking for stdlib.h... (cached) yes >checking for GNU libc compatible realloc... yes >checking for working strtod... yes >checking for copysign... yes >checking for log1p... yes >checking for hypot... yes >checking for acosh... yes >checking for asinh... yes >checking for atanh... yes >checking for rint... yes >checking for irint... no >checking for isnanf... yes >checking for isnand... no >checking for isnan... yes >checking for j0... yes >checking for j1... yes >checking for jn... yes >checking for y0... yes >checking for y1... yes >checking for yn... yes >checking for erf... yes >checking for erfc... yes >checking for strdup... yes >checking for strtod... (cached) yes >checking for floor... yes >checking for getcwd... yes >checking for gettimeofday... yes >checking for memset... yes >checking for modf... yes >checking for pow... yes >checking for rint... (cached) yes >checking for sqrt... yes >checking for strchr... yes >checking for strdup... (cached) yes >checking for strpbrk... yes >checking for strrchr... yes >checking for strstr... yes >checking for strtol... yes >checking for hypot... (cached) yes >checking whether byte ordering is bigendian... no >checking for GMT manpage preprocessor... /usr/bin/cpp -w -P -nostdinc >checking for GMT ftp site selection... ftp.soest.hawaii.edu >checking for Octave or Matlab directory... none... mex compilation disabled >Octave/Matlab mex supplement will be skipped >checking for ncdump... /usr/bin/ncdump >checking for netCDF include directory... /usr/include >checking for netCDF library directory... /usr/lib >checking for file locking... yes >checking for 64-bit compiling... no >checking for universal binaries... no >checking if OK to compile mex... not available >checking if OK to compile xgrid... not available >checking if we should compile with debugging switch -g... no >checking if the triangulation by Shewchuk should be used... no >checking linker options... -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,$(NETCDF_LIB) >checking compiler options for GMT... -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing >checking compiler preprocessor flags for GMT... >checking if CPPFLAGS need to be added to CFLAGS... no >checking for default GMT units... SI (cm) >checking for default PostScript format... PS >configure: creating ./config.status >config.status: creating src/makegmt.macros >config.status: creating src/GMT >config.status: creating src/gmt_version.h >config.status: creating src/isogmt >config.status: creating share/conf/gmt.conf >config.status: creating share/conf/gmtdefaults_SI >config.status: creating share/conf/gmtdefaults_US >config.status: creating src/gmt_notposix.h >make -j14 gmt >cd src ; make all >make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pslib.o pslib.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_bcr.o gmt_bcr.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_calclock.o gmt_calclock.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_cdf.o gmt_cdf.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_customio.o gmt_customio.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_grdio.o gmt_grdio.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_init.o gmt_init.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_io.o gmt_io.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_map.o gmt_map.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_nc.o gmt_nc.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_proj.o gmt_proj.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_shore.o gmt_shore.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_stat.o gmt_stat.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_support.o gmt_support.c >gmt_io.c: In function âGMT_import_tableâ: >gmt_io.c:2875:14: warning: ISO C forbids initialization between function pointer and âvoid *â >gmt_io.c: In function âGMT_export_tableâ: >gmt_io.c:3100:14: warning: ISO C forbids initialization between function pointer and âvoid *â >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_vector.o gmt_vector.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_plot.o gmt_plot.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o blockmean.o blockmean.c >gmt_plot.c: In function âGMT_map_annotateâ: >gmt_plot.c:1808:25: warning: ISO C forbids initialization between function pointer and âvoid *â >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o blockmedian.o blockmedian.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o blockmode.o blockmode.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o filter1d.o filter1d.c >In file included from /usr/include/string.h:642:0, > from gmt.h:77, > from gmt_customio.c:63: >In function âstrcpyâ, > inlined from âGMT_srf_write_grdâ at gmt_customio.c:1693:9: >/usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o fitcircle.o fitcircle.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtconvert.o gmtconvert.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtdefaults.o gmtdefaults.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtmath.o gmtmath.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtselect.o gmtselect.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtset.o gmtset.c >In function âstrcpyâ, > inlined from âGMT_srf_write_grd_infoâ at gmt_customio.c:1464:9: >/usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grd2cpt.o grd2cpt.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grd2xyz.o grd2xyz.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdblend.o grdblend.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdcut.o grdcut.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdclip.o grdclip.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdedit.o grdedit.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdfft.o grdfft.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdfilter.o grdfilter.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdgradient.o grdgradient.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdhisteq.o grdhisteq.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdinfo.o grdinfo.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdlandmask.o grdlandmask.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdmask.o grdmask.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdtrack.o grdtrack.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdreformat.o grdreformat.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdmath.o grdmath.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdpaste.o grdpaste.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdproject.o grdproject.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdsample.o grdsample.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdtrend.o grdtrend.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdvolume.o grdvolume.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o greenspline.o greenspline.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o makecpt.o makecpt.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o mapproject.o mapproject.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o minmax.o minmax.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o nearneighbor.o nearneighbor.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o project.o project.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o ps2raster.o ps2raster.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o sample1d.o sample1d.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o spectrum1d.o spectrum1d.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o splitxyz.o splitxyz.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o surface.o surface.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o trend1d.o trend1d.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o trend2d.o trend2d.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o triangulate.o triangulate.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o xyz2grd.o xyz2grd.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt2rgb.o gmt2rgb.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdcontour.o grdcontour.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdimage.o grdimage.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdvector.o grdvector.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdview.o grdview.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psbasemap.o psbasemap.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psclip.o psclip.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pscoast.o pscoast.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pscontour.o pscontour.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pshistogram.o pshistogram.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psimage.o psimage.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pslegend.o pslegend.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psmask.o psmask.c >In file included from /usr/include/string.h:642:0, > from gmt.h:77, > from psimage.c:27: >In function âstrcpyâ, > inlined from âNew_Psimage_Ctrlâ at psimage.c:357:9: >/usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer >In function âstrcpyâ, > inlined from âmainâ at psimage.c:124:25: >/usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psrose.o psrose.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psscale.o psscale.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pstext.o pstext.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pswiggle.o pswiggle.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psxy.o psxy.c >i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psxyz.o psxyz.c >ar cvur libpsl.a pslib.o >a - pslib.o >i686-pc-linux-gnu-ranlib libpsl.a >ar cvur libgmtps.a gmt_plot.o >a - gmt_plot.o >i686-pc-linux-gnu-ranlib libgmtps.a >ar cvur libgmt.a gmt_bcr.o gmt_calclock.o gmt_cdf.o gmt_customio.o gmt_grdio.o gmt_init.o gmt_io.o gmt_map.o gmt_nc.o gmt_proj.o gmt_shore.o gmt_stat.o gmt_support.o gmt_vector.o >a - gmt_bcr.o >a - gmt_calclock.o >a - gmt_cdf.o >a - gmt_customio.o >a - gmt_grdio.o >a - gmt_init.o >a - gmt_io.o >a - gmt_map.o >a - gmt_nc.o >a - gmt_proj.o >a - gmt_shore.o >a - gmt_stat.o >a - gmt_support.o >a - gmt_vector.o >i686-pc-linux-gnu-ranlib libgmt.a >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib blockmean.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o blockmean >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib blockmedian.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o blockmedian >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib blockmode.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o blockmode >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib filter1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o filter1d >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib fitcircle.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o fitcircle >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtconvert.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtconvert >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtdefaults.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtdefaults >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtmath.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtmath >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtselect.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtselect >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtset.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtset >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grd2cpt.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grd2cpt >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grd2xyz.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grd2xyz >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdblend.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdblend >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdcut.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdcut >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdclip.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdclip >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdedit.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdedit >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdfft.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdfft >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdfilter.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdfilter >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdgradient.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdgradient >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdhisteq.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdhisteq >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdinfo.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdinfo >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdlandmask.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdlandmask >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdmask.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdmask >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdtrack.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdtrack >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdreformat.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdreformat >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdmath.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdmath >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdpaste.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdpaste >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdproject.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdproject >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdsample.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdsample >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdtrend.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdtrend >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdvolume.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdvolume >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib greenspline.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o greenspline >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib makecpt.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o makecpt >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib mapproject.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o mapproject >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib minmax.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o minmax >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib nearneighbor.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o nearneighbor >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib project.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o project >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib ps2raster.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o ps2raster >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib sample1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o sample1d >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib spectrum1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o spectrum1d >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib splitxyz.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o splitxyz >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib surface.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o surface >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib trend1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o trend1d >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib trend2d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o trend2d >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib triangulate.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o triangulate >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib xyz2grd.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o xyz2grd >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmt2rgb.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o gmt2rgb >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdcontour.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdcontour >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdimage.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdimage >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdvector.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdvector >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdview.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdview >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psbasemap.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psbasemap >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psclip.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psclip >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pscoast.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pscoast >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pscontour.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pscontour >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pshistogram.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pshistogram >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psimage.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psimage >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pslegend.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pslegend >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psmask.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psmask >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psrose.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psrose >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psscale.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psscale >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pstext.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pstext >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pswiggle.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pswiggle >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psxy.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psxy >i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psxyz.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psxyz >make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >>>> Source compiled. >>>> Test phase [none]: sci-geosciences/gmt-4.5.0-r2 > >>>> Install gmt-4.5.0-r2 into /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/ category sci-geosciences >make -j14 -j1 prefix=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr datadir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share infodir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/info localstatedir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/var/lib mandir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man sysconfdir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/etc -j14 -j1 includedir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0 libdir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 datadir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/share/gmt-4.5.0 install install-data install-man install >cd src ; make install >make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >/usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/bin >/usr/bin/install -c GMT gmt_shell_functions.sh gmtget gmtlogo isogmt psbbox.sh blockmean blockmedian blockmode filter1d fitcircle gmtconvert gmtdefaults gmtmath gmtselect gmtset grd2cpt grd2xyz grdblend grdcut grdclip grdedit grdfft grdfilter grdgradient grdhisteq grdinfo grdlandmask grdmask grdtrack grdreformat grdmath grdpaste grdproject grdsample grdtrend grdvolume greenspline makecpt mapproject minmax nearneighbor project ps2raster sample1d spectrum1d splitxyz surface trend1d trend2d triangulate xyz2grd gmt2rgb grdcontour grdimage grdvector grdview psbasemap psclip pscoast pscontour pshistogram psimage pslegend psmask psrose psscale pstext pswiggle psxy psxyz /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/bin >if [ ! /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 = /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src ]; then \ > /usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 ; \ > /usr/bin/install -c -m 644 libpsl.a libgmt.a libgmtps.a /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0; \ > if [ ! a = a ]; then /usr/bin/install -c -m 755 libpsl.a libgmt.a libgmtps.a /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0; fi \ > fi >if [ ! /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0 = /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src ]; then \ > /usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0 ; \ > /usr/bin/install -c -m 644 gmt.h gmt_bcr.h gmt_boundcond.h gmt_calclock.h gmt_colors.h gmt_common.h gmt_contour.h gmt_customio.h gmt_dimensions.h gmt_error.h gmt_grd.h gmt_grdio.h gmt_init.h gmt_io.h gmt_map.h gmt_math.h gmt_mgg_header2.h gmt_nan.h gmt_notposix.h gmt_notunix.h gmt_plot.h gmt_project.h gmt_shore.h gmt_stat.h gmt_support.h gmt_symbol.h gmt_synopsis.h gmt_vector.h gmt_version.h pslib.h /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0; \ > fi >if [ a != a ] && [ so != so ]; then \ > cd /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 ; \ > \mv -f libpsl.so libpsl.so; \ > ln -s libpsl.so libpsl.so; \ > \mv -f libgmt.so libgmt.so; \ > ln -s libgmt.so libgmt.so; \ > \mv -f libgmtps.so libgmtps.so; \ > ln -s libgmtps.so libgmtps.so; \ > fi >make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >cd src ; make libs >make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >make[1]: Nothing to be done for `libs'. >make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >make TARGET=install dbase gshhs imgsrc meca mgd77 mgg misc segyprogs sph spotter x2sys x_system >make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' >make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' >cd src ; make install-man >make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >/usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man1 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man3 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man5 >/usr/bin/install -c -m 644 GMT.1 gmt_shell_functions.1 gmtget.1 gmtlogo.1 isogmt.1 psbbox.1 blockmean.1 blockmedian.1 blockmode.1 filter1d.1 fitcircle.1 gmtconvert.1 gmtdefaults.1 gmtmath.1 gmtselect.1 gmtset.1 grd2cpt.1 grd2xyz.1 grdblend.1 grdcut.1 grdclip.1 grdedit.1 grdfft.1 grdfilter.1 grdgradient.1 grdhisteq.1 grdinfo.1 grdlandmask.1 grdmask.1 grdtrack.1 grdreformat.1 grdmath.1 grdpaste.1 grdproject.1 grdsample.1 grdtrend.1 grdvolume.1 greenspline.1 makecpt.1 mapproject.1 minmax.1 nearneighbor.1 project.1 ps2raster.1 sample1d.1 spectrum1d.1 splitxyz.1 surface.1 trend1d.1 trend2d.1 triangulate.1 xyz2grd.1 gmt2rgb.1 grdcontour.1 grdimage.1 grdvector.1 grdview.1 psbasemap.1 psclip.1 pscoast.1 pscontour.1 pshistogram.1 psimage.1 pslegend.1 psmask.1 psrose.1 psscale.1 pstext.1 pswiggle.1 psxy.1 psxyz.1 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man1 >/usr/bin/install -c -m 644 pslib.3 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man3 >/usr/bin/install -c -m 644 gmtcolors.5 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man5 >make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >make TARGET=install-man dbase gshhs imgsrc meca mgd77 mgg misc segyprogs sph spotter x2sys x_system >make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' >make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' >make: Nothing to be done for `install'. >cp: cannot stat `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/{examples,tutorial}': No such file or directory >>>> Completed installing gmt-4.5.0-r2 into /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/ > >strip: i686-pc-linux-gnu-strip --strip-unneeded -R .comment > usr/bin/greenspline > usr/bin/grdtrack > usr/bin/pswiggle > usr/bin/pslegend > usr/bin/grdsample > usr/bin/pshistogram > usr/bin/grdimage > usr/bin/sample1d > usr/bin/triangulate > usr/bin/psbasemap > usr/bin/grdview > usr/bin/grdvector > usr/bin/blockmode > usr/bin/grdcut > usr/bin/surface > usr/bin/grdfft > usr/bin/grdblend > usr/bin/grd2cpt > usr/bin/grdproject > usr/bin/grdmath > usr/bin/psxyz > usr/bin/psmask > usr/bin/blockmedian > usr/bin/gmtmath > usr/bin/grdgradient > usr/bin/pscoast > usr/bin/gmtset > usr/bin/grdinfo > usr/bin/blockmean > usr/bin/grdedit > usr/bin/spectrum1d > usr/bin/xyz2grd > usr/bin/psimage > usr/bin/fitcircle > usr/bin/mapproject > usr/bin/psscale > usr/bin/filter1d > usr/bin/grdmask > usr/bin/pscontour > usr/bin/psclip > usr/bin/trend1d > usr/bin/grdfilter > usr/bin/psrose > usr/bin/psxy > usr/bin/gmtconvert > usr/bin/grdreformat > usr/bin/gmt2rgb > usr/bin/ps2raster > usr/bin/grdcontour > usr/bin/grdhisteq > usr/bin/grdvolume > usr/bin/grdpaste > usr/bin/grdtrend > usr/bin/grd2xyz > usr/bin/project > usr/bin/pstext > usr/bin/gmtdefaults > usr/bin/nearneighbor > usr/bin/minmax > usr/bin/splitxyz > usr/bin/gmtselect > usr/bin/trend2d > usr/bin/grdlandmask > usr/bin/grdclip > usr/bin/makecpt > usr/lib/gmt-4.5.0/libgmt.a > usr/lib/gmt-4.5.0/libpsl.a > usr/lib/gmt-4.5.0/libgmtps.a > > * QA Notice: Package has poor programming practices which may compile > * fine but exhibit random runtime failures. > * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer > * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer > * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer > * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer > > * Please do not file a Gentoo bug and instead report the above QA > * issues directly to the upstream developers of this software. > * Homepage: http://gmt.soest.hawaii.edu/ > * This package will overwrite one or more files that may belong to other > * packages (see list below). You can use a command such as `portageq > * owners / <filename>` to identify the installed package that owns a > * file. If portageq reports that only one package owns a file then do > * NOT file a bug report. A bug report is only useful if it identifies at > * least two or more packages that are known to install the same file(s). > * If a collision occurs and you can not explain where the file came from > * then you should simply ignore the collision since there is not enough > * information to determine if a real problem exists. Please do NOT file > * a bug report at http://bugs.gentoo.org unless you report exactly which > * two packages install the same file(s). Once again, please do NOT file > * a bug report unless you have completely understood the above message. > * > * Detected file collision(s): > * > * /usr/bin/project > * > * Searching all installed packages for file collisions... > * > * Press Ctrl-C to Stop > * > * sci-chemistry/azara-2.7 > * /usr/bin/project > * > * Package 'sci-geosciences/gmt-4.5.0-r2' NOT merged due to file > * collisions. If necessary, refer to your elog messages for the whole > * content of the above message.
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bug 336604
: 246601