* CPV: sci-biology/dialign-tx-1.0.2 * REPO: gentoo * Maintainer: weaver@gentoo.org sci-biology@gentoo.org * USE: elibc_glibc kernel_linux test userland_GNU x86 >>> Unpacking source... >>> Unpacking DIALIGN-TX_1.0.2.tar.gz to /var/tmp/portage/sci-biology/dialign-tx-1.0.2/work >>> Source unpacked in /var/tmp/portage/sci-biology/dialign-tx-1.0.2/work >>> Preparing source in /var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2 ... >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2 ... make -j14 -C source clean make: Entering directory `/var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2/source' rm -rf *.o *rtl *jump *addre* *cfg *life *reg *reload *flow* *stack museq dialign-tx make: Leaving directory `/var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2/source' make -j14 -C source 'CPPFLAGS=-O2 -pipe' make: Entering directory `/var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2/source' gcc -O2 -pipe -O2 -pipe -c -o museq.o museq.c gcc -O2 -pipe -O2 -pipe -c -o parameters.o parameters.c gcc -O2 -pipe -O2 -pipe -c -o io.o io.c gcc -O2 -pipe -O2 -pipe -c -o diag.o diag.c gcc -O2 -pipe -O2 -pipe -c -o alig.o alig.c gcc -O2 -pipe -O2 -pipe -c -o assemble.o assemble.c gcc -O2 -pipe -O2 -pipe -c -o prob.o prob.c gcc -O2 -pipe -O2 -pipe -c -o orf.o orf.c gcc -O2 -pipe -O2 -pipe -c -o translate.o translate.c io.c: In function ‘read_anchors’: io.c:535:3: warning: format ‘%li’ expects type ‘long int *’, but argument 3 has type ‘int *’ io.c:535:3: warning: format ‘%li’ expects type ‘long int *’, but argument 4 has type ‘int *’ io.c:535:3: warning: format ‘%li’ expects type ‘long int *’, but argument 5 has type ‘int *’ io.c:535:3: warning: format ‘%li’ expects type ‘long int *’, but argument 6 has type ‘int *’ io.c:535:3: warning: format ‘%li’ expects type ‘long int *’, but argument 7 has type ‘int *’ io.c: In function ‘read_diag_prob_dist’: io.c:371:13: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result io.c: In function ‘read_scr_matrix’: io.c:270:9: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result io.c:282:11: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result rm -f ./museq gcc -o ./museq \ ./museq.o ./parameters.o ./io.o ./diag.o ./alig.o ./assemble.o ./prob.o ./orf.o ./translate.o \ -pipe -Wall -lm mv museq dialign-tx make: Leaving directory `/var/tmp/portage/sci-biology/dialign-tx-1.0.2/work/DIALIGN-TX_1.0.2/source' >>> Source compiled. >>> Test phase [none]: sci-biology/dialign-tx-1.0.2 >>> Install dialign-tx-1.0.2 into /var/tmp/portage/sci-biology/dialign-tx-1.0.2/image/ category sci-biology >>> Completed installing dialign-tx-1.0.2 into /var/tmp/portage/sci-biology/dialign-tx-1.0.2/image/ strip: i686-pc-linux-gnu-strip --strip-unneeded -R .comment usr/bin/dialign-tx * QA Notice: Files built without respecting LDFLAGS have been detected * Please include the following list of files in your report: * /usr/bin/dialign-tx * The configuration directory is * /usr/lib/dialign-tx/conf * You will need to pass this to dialign-tx on every run.