emerge log

molden-emerge-fail.txt (text/plain), 32.55 KB, created by Benj FitzPatrick on 2010-08-13 18:18:30 UTC

localhost matlab-2010a # emerge molden
Calculating dependencies... done!

>>> Verifying ebuild manifests

>>> Emerging (1 of 1) sci-chemistry/molden-4.8-r1
 * molden4.8.tar.gz RMD160 SHA1 SHA256 size ;-) ...                                                                        
[ ok ]
 * checking ebuild checksums ;-) ...                                                                                       
[ ok ]
 * checking auxfile checksums ;-) ...                                                                                      
[ ok ]
 * checking miscfile checksums ;-) ...                                                                                     
[ ok ]
 * CPV:  sci-chemistry/molden-4.8-r1
 * REPO: funtoo
 * USE:  amd64 elibc_glibc kernel_linux multilib opengl userland_GNU
 * You need one of these Fortran Compilers: g77 gfortran
 * Installed are:  gfortran
>>> Unpacking source...
>>> Unpacking molden4.8.tar.gz to /var/tmp/portage/sci-chemistry/molden-4.8-r1/work
 * Applying patches for selected FORTRAN compiler: gfortran
>>> Source unpacked in /var/tmp/portage/sci-chemistry/molden-4.8-r1/work
>>> Preparing source in /var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8 ...
 * Applying molden-4.8-ambfor.patch ...                                                                                    
[ ok ]
 * Applying molden-4.8-overflow.patch ...                                                                                  
[ ok ]
 * Applying molden-4.8-ldflags.patch ...                                                                                   
[ ok ]
 * Applying molden-4.7-implicit-dec.patch ...                                                                              
[ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8 ...
 * Building Molden...
make -j2 -j1 'CC=x86_64-pc-linux-gnu-gcc -march=opteron -O2 -pipe' FC=gfortran LDR=gfortran FFLAGS= 
gfortran   -c -o atomdens.o atomdens.f
gfortran   -c -o molden.o molden.f
gfortran   -c -o above.o above.f
gfortran   -c -o actcal.o actcal.f
gfortran   -c -o basprt.o basprt.f
basprt.f:23.44:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  /                        
                                            1
Warning: Extension: Hollerith constant at (1)
basprt.f:19.20:

      data namesh/3hs  ,3hsp ,3hspd,3hf  ,3hg  ,                        
                    1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.26:

      data namesh/3hs  ,3hsp ,3hspd,3hf  ,3hg  ,                        
                          1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.32:

      data namesh/3hs  ,3hsp ,3hspd,3hf  ,3hg  ,                        
                                1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.38:

      data namesh/3hs  ,3hsp ,3hspd,3hf  ,3hg  ,                        
                                      1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.44:

      data namesh/3hs  ,3hsp ,3hspd,3hf  ,3hg  ,                        
                                            1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.20:

     &            3h???,3hp  ,3hd  ,3h???,3hg  ,                        
                    1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.26:

     &            3h???,3hp  ,3hd  ,3h???,3hg  ,                        
                          1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.32:

     &            3h???,3hp  ,3hd  ,3h???,3hg  ,                        
                                1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.38:

     &            3h???,3hp  ,3hd  ,3h???,3hg  ,                        
                                      1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.44:

     &            3h???,3hp  ,3hd  ,3h???,3hg  ,                        
                                            1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.20:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                    1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.26:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                          1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.32:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                                1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.38:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                                      1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.44:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                                            1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.20:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                    1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.26:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                          1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.32:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                                1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.38:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                                      1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.44:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  ,                        
                                            1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.20:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  /                        
                    1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.26:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  /                        
                          1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.32:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  /                        
                                1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.38:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  /                        
                                      1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.44:

     &            3hs  ,3hsp ,3hd  ,3hf  ,3hg  /                        
                                            1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
gfortran   -c -o calc.o calc.f
gfortran   -c -o caldis.o caldis.f
gfortran   -c -o calfa.o calfa.f
gfortran   -c -o cntour.o cntour.f
gfortran   -c -o cnvgam.o cnvgam.f
gfortran   -c -o cnvgau.o cnvgau.f
gfortran   -c -o convzmat.o convzmat.f
gfortran   -c -o cross.o cross.f
gfortran   -c -o crprod.o crprod.f
gfortran   -c -o datin.o datin.f
gfortran   -c -o defpc.o defpc.f
gfortran   -c -o defrad.o defrad.f
gfortran   -c -o del.o del.f
gfortran   -c -o denmak.o denmak.f
gfortran   -c -o densmat.o densmat.f
gfortran   -c -o distot.o distot.f
gfortran   -c -o dmat.o dmat.f
gfortran   -c -o docent.o docent.f
gfortran   -c -o draw.o draw.f
gfortran   -c -o euler.o euler.f
gfortran   -c -o eulerh.o eulerh.f
gfortran   -c -o files.o files.f
gfortran   -c -o fndcal.o fndcal.f
gfortran   -c -o gampoi.o gampoi.f
gfortran   -c -o gaupoi.o gaupoi.f
gfortran   -c -o gaussian.o gaussian.f
gfortran   -c -o geogam.o geogam.f
gfortran   -c -o geogau.o geogau.f
gfortran   -c -o getmul.o getmul.f
gfortran   -c -o getpoi.o getpoi.f
gfortran   -c -o getreal.o getreal.f
gfortran   -c -o gmmcnv.o gmmcnv.f
gfortran   -c -o grdcal.o grdcal.f
gfortran   -c -o gstr.o gstr.f
gfortran   -c -o hidedr.o hidedr.f
gfortran   -c -o impsc.o impsc.f
gfortran   -c -o locatc.o locatc.f
gfortran   -c -o maxmin.o maxmin.f
gfortran   -c -o mdout.o mdout.f
gfortran   -c -o mmcnv.o mmcnv.f
gfortran   -c -o mopaco.o mopaco.f
gfortran   -c -o mopin.o mopin.f
gfortran   -c -o mulprt.o mulprt.f
gfortran   -c -o occin.o occin.f
gfortran   -c -o oriin.o oriin.f
gfortran   -c -o parang.o parang.f
gfortran   -c -o pareul.o pareul.f
gfortran   -c -o parfc.o parfc.f
gfortran   -c -o parori.o parori.f
gfortran   -c -o parpla.o parpla.f
gfortran   -c -o parstp.o parstp.f
gfortran   -c -o planky.o planky.f
gfortran   -c -o plend.o plend.f
gfortran   -c -o plini.o plini.f
gfortran   -c -o plmol.o plmol.f
gfortran   -c -o plotgh.o plotgh.f
gfortran   -c -o plotgr.o plotgr.f
plotgr.f:71.72:

        if (iplot.eq.0) assign 20 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:72.72:

        if (iplot.eq.1) assign 40 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:73.72:

        if (iplot.eq.2) assign 60 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:74.72:

        if (iplot.eq.4) assign 100 to istmnt                            
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:76.72:

        if (iplot.eq.0) assign 10 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:77.72:

        if (iplot.eq.1) assign 30 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:78.72:

        if (iplot.eq.2) assign 50 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:79.72:

        if (iplot.eq.4) assign 90 to istmnt                             
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
plotgr.f:81.47:

      if (iplot.eq.0.or.iplot.eq.1) write(iun4,istmnt)dx,dy             
                                               1
Warning: Deleted feature: ASSIGNED variable in FORMAT tag at (1)
plotgr.f:83.19:

        write(iun4,istmnt)char(27),int(dx*389),int(dy*389)              
                   1
Warning: Deleted feature: ASSIGNED variable in FORMAT tag at (1)
plotgr.f:120.19:

        write(iun4,istmnt)int(dx*2000),int(dy*2000)+125                 
                   1
Warning: Deleted feature: ASSIGNED variable in FORMAT tag at (1)
gfortran   -c -o plotin.o plotin.f
gfortran   -c -o plpost.o plpost.f
gfortran   -c -o prev.o prev.f
gfortran   -c -o proato.o proato.f
gfortran   -c -o procnv.o procnv.f
gfortran   -c -o progeo.o progeo.f
gfortran   -c -o rdbas.o rdbas.f
gfortran   -c -o rdcor.o rdcor.f
gfortran   -c -o rdgam.o rdgam.f
gfortran   -c -o rdgaus.o rdgaus.f
gfortran   -c -o rdinfo.o rdinfo.f
gfortran   -c -o rdpdb.o rdpdb.f
gfortran   -c -o rdvect.o rdvect.f
gfortran   -c -o reada.o reada.f
gfortran   -c -o readel.o readel.f
gfortran   -c -o readvv.o readvv.f
gfortran   -c -o renorm.o renorm.f
gfortran   -c -o rmomen.o rmomen.f
gfortran   -c -o rota.o rota.f
gfortran   -c -o rotatg.o rotatg.f
gfortran   -c -o rotb.o rotb.f
gfortran   -c -o rotc.o rotc.f
gfortran   -c -o rotcor.o rotcor.f
gfortran   -c -o rotd.o rotd.f
gfortran   -c -o rotfir.o rotfir.f
gfortran   -c -o rotm.o rotm.f
gfortran   -c -o rotmom.o rotmom.f
gfortran   -c -o scback.o scback.f
gfortran   -c -o search.o search.f
gfortran   -c -o searchd.o searchd.f
gfortran   -c -o setang.o setang.f
gfortran   -c -o setbas.o setbas.f
gfortran   -c -o settc.o settc.f
gfortran   -c -o shsort.o shsort.f
gfortran   -c -o site.o site.f
gfortran   -c -o slater.o slater.f
gfortran   -c -o stoc.o stoc.f
gfortran   -c -o tessa.o tessa.f
gfortran   -c -o tk4014.o tk4014.f
gfortran   -c -o tocap.o tocap.f
gfortran   -c -o tocapf.o tocapf.f
gfortran   -c -o tomold.o tomold.f
gfortran   -c -o under.o under.f
gfortran   -c -o vaxdum.o vaxdum.f
gfortran   -c -o vclr.o vclr.f
gfortran   -c -o vec.o vec.f
gfortran   -c -o vlen.o vlen.f
gfortran   -c -o vsc1.o vsc1.f
gfortran   -c -o wrinfo.o wrinfo.f
gfortran   -c -o zread.o zread.f
gfortran   -c -o samino.o samino.f
gfortran   -c -o prtcal.o prtcal.f
gfortran   -c -o actss.o actss.f
gfortran   -c -o actami.o actami.f
gfortran   -c -o plden.o plden.f
gfortran   -c -o heaps.o heaps.f
gfortran   -c -o den3d.o den3d.f
gfortran   -c -o dencnt.o dencnt.f
gfortran   -c -o plhead.o plhead.f
gfortran   -c -o pltab.o pltab.f
gfortran   -c -o eucmol.o eucmol.f
gfortran   -c -o pl3dm.o pl3dm.f
gfortran   -c -o plbox.o plbox.f
gfortran   -c -o selsol.o selsol.f
gfortran   -c -o atmd.o atmd.f
gfortran   -c -o dolift.o dolift.f
gfortran   -c -o spaced.o spaced.f
gfortran   -c -o snypnt.o snypnt.f
gfortran   -c -o eulstr.o eulstr.f
gfortran   -c -o calct.o calct.f
gfortran   -c -o coeffs.o coeffs.f
gfortran   -c -o epint.o epint.f
gfortran   -c -o espot.o espot.f
gfortran   -c -o fcij.o fcij.f
gfortran   -c -o fmt.o fmt.f
gfortran   -c -o genaos.o genaos.f
gfortran   -c -o rys.o rys.f
gfortran   -c -o ryspol.o ryspol.f
gfortran   -c -o rysrot.o rysrot.f
gfortran   -c -o thrcen.o thrcen.f
gfortran   -c -o twocen.o twocen.f
gfortran   -c -o ifblen.o ifblen.f
gfortran   -c -o rott.o rott.f
gfortran   -c -o plmolp.o plmolp.f
gfortran   -c -o wrzmat.o wrzmat.f
gfortran   -c -o rdchx.o rdchx.f
rdchx.f:1622.72:

          assign 1070 to istmnt                                         
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
rdchx.f:1625.72:

          assign 1075 to istmnt                                         
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
rdchx.f:1640.19:

         read(iun2,istmnt,end=1000,err=1000) (icon(i),i=1,jleft)        
                   1
Warning: Deleted feature: ASSIGNED variable in FORMAT tag at (1)
gfortran   -c -o obin.o obin.f
gfortran   -c -o pred.o pred.f
gfortran   -c -o gargpl.o gargpl.f
gfortran   -c -o inferr.o inferr.f
gfortran   -c -o freqs.o freqs.f
gfortran   -c -o getmop.o getmop.f
gfortran   -c -o brklin.o brklin.f
gfortran   -c -o getzm.o getzm.f
gfortran   -c -o xyzcoo.o xyzcoo.f
gfortran   -c -o geomop.o geomop.f
gfortran   -c -o dumzm.o dumzm.f
gfortran   -c -o getxyz.o getxyz.f
gfortran   -c -o espchrg.o espchrg.f
gfortran   -c -o proxim.o proxim.f
gfortran   -c -o rdgamu.o rdgamu.f
gfortran   -c -o plvrml.o plvrml.f
gfortran   -c -o molsint.o molsint.f
gfortran   -c -o runjob.o runjob.f
gfortran   -c -o rdmsf.o rdmsf.f
gfortran   -c -o wrmsf.o wrmsf.f
gfortran   -c -o rdmolf.o rdmolf.f
gfortran   -c -o adf_fun.o adf_fun.f
gfortran   -c -o rotpol.o rotpol.f
gfortran   -c -o extbas.o extbas.f
gfortran   -c -o rdcpmd.o rdcpmd.f
gfortran   -c -o eem.o eem.f
eem.f:821.72:

   10 assign 30 to next                                                 
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
eem.f:826.19:

   20    go to next,(30, 50, 70, 110)                                   
                   1
Warning: Deleted feature: Assigned GOTO statement at (1)
eem.f:828.72:

      assign 50 to next                                                 
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
eem.f:837.72:

      assign 70 to next                                                 
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
eem.f:843.72:

      assign 110 to next                                                
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
gfortran   -c -o asspmf.o asspmf.f
gfortran   -c -o srfcal.o srfcal.f
gfortran   -c -o rdqchm.o rdqchm.f
gfortran   -c -o rdorca.o rdorca.f
gfortran   -c -o rdmaux.o rdmaux.f
gfortran   -c -o mpdum.o mpdum.f
x86_64-pc-linux-gnu-gcc -march=opteron -O2 -pipe -c -I/usr/X11R6/include -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0   -c -o 
xwin.o xwin.c
xwin.c: In function 'DebugStructure':
xwin.c:13366: warning: format '%d' expects type 'int', but argument 3 has type 'struct QBOXSTRU *'
xwin.c: In function 'doamb':
xwin.c:23937: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23962: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23969: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23978: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23985: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23997: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24004: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24013: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24020: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24034: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24041: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24050: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24057: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24068: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24075: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24084: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24091: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c: In function 'exstr_':
xwin.c:24181: warning: not enough variable arguments to fit a sentinel
xwin.c:24136: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c: In function 'LZWwrite':
xwin.c:31571: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'compress':
xwin.c:31670: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'ToGIF':
xwin.c:31717: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'write_spectrum':
xwin.c:36834: warning: unknown conversion type character 0xa in format
xwin.c: In function 'LoadResrot':
xwin.c:37277: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c:37281: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c:37285: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c: In function 'dos2u':
xwin.c:44976: warning: ignoring return value of 'mktemp', declared with attribute warn_unused_result
xwin.c: In function 'LigandHydroPBE':
xwin.c:46261: warning: format '%[^"' expects type 'char *', but argument 3 has type 'char (*)[10]'
In file included from /usr/include/string.h:640,
                 from /usr/include/X11/Xos.h:62,
                 from xwin.c:14:
In function 'strncpy',
    inlined from 'NewActiveStruct' at xwin.c:13653:
/usr/include/bits/string3.h:122: warning: call to __builtin___strncpy_chk will always overflow destination buffer
gfortran -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -o molden atomdens.o molden.o above.o actcal.o basprt.o calc.o caldis.o 
calfa.o cntour.o cnvgam.o cnvgau.o convzmat.o cross.o crprod.o datin.o defpc.o defrad.o del.o denmak.o densmat.o distot.o 
dmat.o docent.o draw.o euler.o eulerh.o files.o fndcal.o gampoi.o gaupoi.o gaussian.o geogam.o geogau.o getmul.o getpoi.o 
getreal.o gmmcnv.o grdcal.o gstr.o hidedr.o impsc.o locatc.o maxmin.o mdout.o mmcnv.o mopaco.o mopin.o mulprt.o occin.o 
oriin.o parang.o pareul.o parfc.o parori.o parpla.o parstp.o planky.o plend.o plini.o plmol.o plotgh.o plotgr.o plotin.o 
plpost.o prev.o proato.o procnv.o progeo.o rdbas.o rdcor.o rdgam.o rdgaus.o rdinfo.o rdpdb.o rdvect.o reada.o readel.o 
readvv.o renorm.o rmomen.o rota.o rotatg.o rotb.o rotc.o rotcor.o rotd.o rotfir.o rotm.o rotmom.o scback.o search.o 
searchd.o setang.o setbas.o settc.o shsort.o site.o slater.o stoc.o tessa.o tk4014.o tocap.o tocapf.o tomold.o under.o 
vaxdum.o vclr.o vec.o vlen.o vsc1.o wrinfo.o zread.o samino.o prtcal.o actss.o actami.o plden.o heaps.o den3d.o dencnt.o 
plhead.o pltab.o eucmol.o pl3dm.o plbox.o selsol.o atmd.o dolift.o spaced.o snypnt.o eulstr.o calct.o coeffs.o epint.o 
espot.o fcij.o fmt.o genaos.o rys.o ryspol.o rysrot.o thrcen.o twocen.o ifblen.o rott.o plmolp.o wrzmat.o rdchx.o obin.o 
pred.o gargpl.o inferr.o freqs.o getmop.o brklin.o getzm.o xyzcoo.o geomop.o dumzm.o getxyz.o espchrg.o proxim.o rdgamu.o 
plvrml.o molsint.o runjob.o rdmsf.o wrmsf.o rdmolf.o adf_fun.o rotpol.o extbas.o rdcpmd.o eem.o asspmf.o srfcal.o rdqchm.o 
rdorca.o rdmaux.o mpdum.o xwin.o -L/usr/X11R6/lib -lX11 -lm
xwin.o: In function `DoWGET':
xwin.c:(.text+0x30ff3): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
xwin.o: In function `dos2u':
xwin.c:(.text+0x302ce): warning: the use of `mktemp' is dangerous, better use `mkstemp'
x86_64-pc-linux-gnu-gcc -march=opteron -O2 -pipe -c -I/usr/X11R6/include -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0 -DDOGL -c 
xwin.c -o xwingl.o
xwin.c: In function 'DebugStructure':
xwin.c:13366: warning: format '%d' expects type 'int', but argument 3 has type 'struct QBOXSTRU *'
xwin.c: In function 'doamb':
xwin.c:23937: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23962: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23969: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23978: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23985: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:23997: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24004: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24013: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24020: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24034: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24041: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24050: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24057: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24068: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24075: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24084: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:24091: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c: In function 'exstr_':
xwin.c:24181: warning: not enough variable arguments to fit a sentinel
xwin.c:24136: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c: In function 'LZWwrite':
xwin.c:31571: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'compress':
xwin.c:31670: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'ToGIF':
xwin.c:31717: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'write_spectrum':
xwin.c:36834: warning: unknown conversion type character 0xa in format
xwin.c: In function 'LoadResrot':
xwin.c:37277: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c:37281: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c:37285: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c: In function 'putbyte':
xwin.c:41343: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'putshort':
xwin.c:41354: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'WOGLGIF':
xwin.c:41449: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'save_rgb':
xwin.c:41529: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c:41538: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c:41545: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c:41552: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'save_bmp':
xwin.c:41617: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c:41624: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c:41627: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result
xwin.c: In function 'molsrf':
xwin.c:43122: warning: ignoring return value of 'system', declared with attribute warn_unused_result
xwin.c:43237: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result
xwin.c: In function 'dos2u':
xwin.c:44976: warning: ignoring return value of 'mktemp', declared with attribute warn_unused_result
xwin.c: In function 'LigandHydroPBE':
xwin.c:46261: warning: format '%[^"' expects type 'char *', but argument 3 has type 'char (*)[10]'
xwin.c: In function 'ogrdmol':
xwin.c:46859: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:46862: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:46866: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c: In function 'rdoglfile':
xwin.c:47218: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47227: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47260: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47422: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47473: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47507: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47522: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47541: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
xwin.c:47554: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result
In file included from /usr/include/string.h:640,
                 from /usr/include/X11/Xos.h:62,
                 from xwin.c:14:
In function 'strncpy',
    inlined from 'NewActiveStruct' at xwin.c:13653:
/usr/include/bits/string3.h:122: warning: call to __builtin___strncpy_chk will always overflow destination buffer
gfortran -Wl,-O1 -Wl,--sort-common -Wl,--as-needed  -o gmolden atomdens.o molden.o above.o actcal.o basprt.o calc.o 
caldis.o calfa.o cntour.o cnvgam.o cnvgau.o convzmat.o cross.o crprod.o datin.o defpc.o defrad.o del.o denmak.o densmat.o 
distot.o dmat.o docent.o draw.o euler.o eulerh.o files.o fndcal.o gampoi.o gaupoi.o gaussian.o geogam.o geogau.o getmul.o 
getpoi.o getreal.o gmmcnv.o grdcal.o gstr.o hidedr.o impsc.o locatc.o maxmin.o mdout.o mmcnv.o mopaco.o mopin.o mulprt.o 
occin.o oriin.o parang.o pareul.o parfc.o parori.o parpla.o parstp.o planky.o plend.o plini.o plmol.o plotgh.o plotgr.o 
plotin.o plpost.o prev.o proato.o procnv.o progeo.o rdbas.o rdcor.o rdgam.o rdgaus.o rdinfo.o rdpdb.o rdvect.o reada.o 
readel.o readvv.o renorm.o rmomen.o rota.o rotatg.o rotb.o rotc.o rotcor.o rotd.o rotfir.o rotm.o rotmom.o scback.o 
search.o searchd.o setang.o setbas.o settc.o shsort.o site.o slater.o stoc.o tessa.o tk4014.o tocap.o tocapf.o tomold.o 
under.o vaxdum.o vclr.o vec.o vlen.o vsc1.o wrinfo.o zread.o samino.o prtcal.o actss.o actami.o plden.o heaps.o den3d.o 
dencnt.o plhead.o pltab.o eucmol.o pl3dm.o plbox.o selsol.o atmd.o dolift.o spaced.o snypnt.o eulstr.o calct.o coeffs.o 
epint.o espot.o fcij.o fmt.o genaos.o rys.o ryspol.o rysrot.o thrcen.o twocen.o ifblen.o rott.o plmolp.o wrzmat.o rdchx.o 
obin.o pred.o gargpl.o inferr.o freqs.o getmop.o brklin.o getzm.o xyzcoo.o geomop.o dumzm.o getxyz.o espchrg.o proxim.o 
rdgamu.o plvrml.o molsint.o runjob.o rdmsf.o wrmsf.o rdmolf.o adf_fun.o rotpol.o extbas.o rdcpmd.o eem.o asspmf.o srfcal.o 
rdqchm.o rdorca.o rdmaux.o mpdum.o xwingl.o -L/usr/X11R6/lib -lGLU -lGL -lXmu -lX11 -lm
xwingl.o: In function `molsrf':
xwin.c:(.text+0x2a6be): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
xwingl.o: In function `dos2u':
xwin.c:(.text+0x389ce): warning: the use of `mktemp' is dangerous, better use `mkstemp'
make -C ambfor FC=gfortran FFLAGS="" LDR="gfortran" CFLAGS="-c -I/usr/X11R6/include -DDOBACK -DHASTIMER 
-DCOLOR_OFFSET=0.0"
make[1]: Entering directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/ambfor'
gfortran  -c ambfor.f -o ambfor.o 
x86_64-pc-linux-gnu-gcc -march=opteron -O2 -pipe -c -I/usr/X11R6/include -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0   -c -o 
alloc.o alloc.c
gfortran   -c -o angle.o angle.f
gfortran   -c -o bond.o bond.f
gfortran   -c -o charge.o charge.f
gfortran   -c -o conn.o conn.f
gfortran   -c -o enegrd.o enegrd.f
gfortran   -c -o getinp.o getinp.f
gfortran   -c -o param.o param.f
gfortran   -c -o tors.o tors.f
gfortran   -c -o vdwlj.o vdwlj.f
gfortran   -c -o math.o math.f
gfortran   -c -o optimise.o optimise.f
gfortran   -c -o switch.o switch.f
gfortran   -c -o wrtout.o wrtout.f
gfortran   -c -o pbc.o pbc.f
gfortran -o ambfor ambfor.o alloc.o angle.o bond.o charge.o conn.o enegrd.o getinp.o param.o tors.o vdwlj.o math.o 
optimise.o switch.o wrtout.o pbc.o -lm
gfortran   -c -o md.o md.f
gfortran   -c -o verlet.o verlet.f
x86_64-pc-linux-gnu-gcc -march=opteron -O2 -pipe -c -I/usr/X11R6/include -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0 -DMD -c 
alloc.c -o allocmd.o
gfortran -o ambmd md.o verlet.o allocmd.o angle.o bond.o charge.o conn.o enegrd.o getinp.o param.o tors.o vdwlj.o math.o 
optimise.o switch.o wrtout.o pbc.o -lm
make[1]: Leaving directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/ambfor'
make -C surf depend
make[1]: Entering directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/surf'
making dependencies...
ex: applet not found
make[1]: *** [depend] Error 1
make[1]: Leaving directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/surf'
make: *** [surf/surf] Error 2
 * ERROR: sci-chemistry/molden-4.8-r1 failed:
 *   molden emake failed
 * 
 * Call stack:
 *     ebuild.sh, line  47:  Called src_compile
 *   environment, line 3426:  Called die
 * The specific snippet of code:
 *       emake -j1 "${args[@]}" || die "molden emake failed";
 * 
 * If you need support, post the output of 'emerge --info =sci-chemistry/molden-4.8-r1',
 * the complete build log and the output of 'emerge -pqv =sci-chemistry/molden-4.8-r1'.
 * The complete build log is located at '/var/tmp/portage/sci-chemistry/molden-4.8-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/molden-4.8-r1/temp/environment'.
 * S: '/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8'