Attachment #242673 for bug #330507

View | Details | Raw Unified | Return to bug 330507 | Differences between
Collapse All | Expand All




# Makefile.in generated by automake 1.11.1 from Makefile.am.
# @configure_input@

# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,

	dbifasta$(EXEEXT) dbiflat$(EXEEXT) dbigcg$(EXEEXT) \
	dbxfasta$(EXEEXT) dbxflat$(EXEEXT) dbxgcg$(EXEEXT) \
	degapseq$(EXEEXT) density$(EXEEXT) descseq$(EXEEXT) \
	diffseq$(EXEEXT) tryptic_digest$(EXEEXT) distmat$(EXEEXT) \
	dotmatcher$(EXEEXT) dotpath$(EXEEXT) dottup$(EXEEXT) \
	dreg$(EXEEXT) edialign$(EXEEXT) einverted$(EXEEXT) \
	embossdata$(EXEEXT) embossversion$(EXEEXT) emma$(EXEEXT) \

subdir = emboss
DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in COPYING
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/configure.in
	$(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/grout.m4 \
	$(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
	$(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/sgi.m4 \
	$(top_srcdir)/configure.in
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
	$(ACLOCAL_M4)
mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs

am_aaindexextract_OBJECTS = aaindexextract.$(OBJEXT)
aaindexextract_OBJECTS = $(am_aaindexextract_OBJECTS)
aaindexextract_LDADD = $(LDADD)
am__DEPENDENCIES_1 =
@ISCYGWIN_FALSE@aaindexextract_DEPENDENCIES =  \
@ISCYGWIN_FALSE@	../nucleus/libnucleus.la ../ajax/libajaxg.la \
@ISCYGWIN_FALSE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_FALSE@	$(am__DEPENDENCIES_1)
@ISCYGWIN_TRUE@aaindexextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_abiview_OBJECTS = abiview.$(OBJEXT)
abiview_OBJECTS = $(am_abiview_OBJECTS)
abiview_LDADD = $(LDADD)
@ISCYGWIN_FALSE@abiview_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@abiview_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdc_OBJECTS = acdc.$(OBJEXT)
acdc_OBJECTS = $(am_acdc_OBJECTS)
acdc_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdc_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdc_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdlog_OBJECTS = acdlog.$(OBJEXT)
acdlog_OBJECTS = $(am_acdlog_OBJECTS)
acdlog_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdlog_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdlog_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdpretty_OBJECTS = acdpretty.$(OBJEXT)
acdpretty_OBJECTS = $(am_acdpretty_OBJECTS)
acdpretty_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdpretty_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdpretty_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdtable_OBJECTS = acdtable.$(OBJEXT)
acdtable_OBJECTS = $(am_acdtable_OBJECTS)
acdtable_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdtable_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdtable_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdtrace_OBJECTS = acdtrace.$(OBJEXT)
acdtrace_OBJECTS = $(am_acdtrace_OBJECTS)
acdtrace_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdtrace_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdtrace_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdvalid_OBJECTS = acdvalid.$(OBJEXT)
acdvalid_OBJECTS = $(am_acdvalid_OBJECTS)
acdvalid_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdvalid_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdvalid_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_acdxsd_OBJECTS = acdxsd.$(OBJEXT)
acdxsd_OBJECTS = $(am_acdxsd_OBJECTS)
acdxsd_LDADD = $(LDADD)
@ISCYGWIN_FALSE@acdxsd_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@acdxsd_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_ajtest_OBJECTS = ajtest.$(OBJEXT)
ajtest_OBJECTS = $(am_ajtest_OBJECTS)
ajtest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@ajtest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@ajtest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_aligncopy_OBJECTS = aligncopy.$(OBJEXT)
aligncopy_OBJECTS = $(am_aligncopy_OBJECTS)
aligncopy_LDADD = $(LDADD)
@ISCYGWIN_FALSE@aligncopy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@aligncopy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_aligncopypair_OBJECTS = aligncopypair.$(OBJEXT)
aligncopypair_OBJECTS = $(am_aligncopypair_OBJECTS)
aligncopypair_LDADD = $(LDADD)
@ISCYGWIN_FALSE@aligncopypair_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@aligncopypair_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_antigenic_OBJECTS = antigenic.$(OBJEXT)
antigenic_OBJECTS = $(am_antigenic_OBJECTS)
antigenic_LDADD = $(LDADD)
@ISCYGWIN_FALSE@antigenic_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@antigenic_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_backtranambig_OBJECTS = backtranambig.$(OBJEXT)
backtranambig_OBJECTS = $(am_backtranambig_OBJECTS)
backtranambig_LDADD = $(LDADD)
@ISCYGWIN_FALSE@backtranambig_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@backtranambig_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_backtranseq_OBJECTS = backtranseq.$(OBJEXT)
backtranseq_OBJECTS = $(am_backtranseq_OBJECTS)
backtranseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@backtranseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@backtranseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_banana_OBJECTS = banana.$(OBJEXT)
banana_OBJECTS = $(am_banana_OBJECTS)
banana_LDADD = $(LDADD)
@ISCYGWIN_FALSE@banana_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@banana_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_biosed_OBJECTS = biosed.$(OBJEXT)
biosed_OBJECTS = $(am_biosed_OBJECTS)
biosed_LDADD = $(LDADD)
@ISCYGWIN_FALSE@biosed_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@biosed_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_btwisted_OBJECTS = btwisted.$(OBJEXT)
btwisted_OBJECTS = $(am_btwisted_OBJECTS)
btwisted_LDADD = $(LDADD)
@ISCYGWIN_FALSE@btwisted_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@btwisted_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cai_OBJECTS = cai.$(OBJEXT)
cai_OBJECTS = $(am_cai_OBJECTS)
cai_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cai_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cai_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_chaos_OBJECTS = chaos.$(OBJEXT)
chaos_OBJECTS = $(am_chaos_OBJECTS)
chaos_LDADD = $(LDADD)
@ISCYGWIN_FALSE@chaos_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@chaos_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_charge_OBJECTS = charge.$(OBJEXT)
charge_OBJECTS = $(am_charge_OBJECTS)
charge_LDADD = $(LDADD)
@ISCYGWIN_FALSE@charge_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@charge_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_checktrans_OBJECTS = checktrans.$(OBJEXT)
checktrans_OBJECTS = $(am_checktrans_OBJECTS)
checktrans_LDADD = $(LDADD)
@ISCYGWIN_FALSE@checktrans_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@checktrans_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_chips_OBJECTS = chips.$(OBJEXT)
chips_OBJECTS = $(am_chips_OBJECTS)
chips_LDADD = $(LDADD)
@ISCYGWIN_FALSE@chips_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@chips_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cirdna_OBJECTS = cirdna.$(OBJEXT)
cirdna_OBJECTS = $(am_cirdna_OBJECTS)
cirdna_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cirdna_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cirdna_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_codcmp_OBJECTS = codcmp.$(OBJEXT)
codcmp_OBJECTS = $(am_codcmp_OBJECTS)
codcmp_LDADD = $(LDADD)
@ISCYGWIN_FALSE@codcmp_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@codcmp_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
codcopy_SOURCES = codcopy.c
codcopy_OBJECTS = codcopy.$(OBJEXT)
codcopy_LDADD = $(LDADD)
@ISCYGWIN_FALSE@codcopy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@codcopy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_coderet_OBJECTS = coderet.$(OBJEXT)
coderet_OBJECTS = $(am_coderet_OBJECTS)
coderet_LDADD = $(LDADD)
@ISCYGWIN_FALSE@coderet_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@coderet_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_complex_OBJECTS = complex.$(OBJEXT)
complex_OBJECTS = $(am_complex_OBJECTS)
complex_LDADD = $(LDADD)
@ISCYGWIN_FALSE@complex_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@complex_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_compseq_OBJECTS = compseq.$(OBJEXT)
compseq_OBJECTS = $(am_compseq_OBJECTS)
compseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@compseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@compseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cons_OBJECTS = cons.$(OBJEXT)
cons_OBJECTS = $(am_cons_OBJECTS)
cons_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cons_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cons_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_consambig_OBJECTS = consambig.$(OBJEXT)
consambig_OBJECTS = $(am_consambig_OBJECTS)
consambig_LDADD = $(LDADD)
@ISCYGWIN_FALSE@consambig_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@consambig_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_corbatest_OBJECTS = corbatest.$(OBJEXT)
corbatest_OBJECTS = $(am_corbatest_OBJECTS)
corbatest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@corbatest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@corbatest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cpgplot_OBJECTS = cpgplot.$(OBJEXT)
cpgplot_OBJECTS = $(am_cpgplot_OBJECTS)
cpgplot_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cpgplot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cpgplot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cpgreport_OBJECTS = cpgreport.$(OBJEXT)
cpgreport_OBJECTS = $(am_cpgreport_OBJECTS)
cpgreport_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cusp_OBJECTS = cusp.$(OBJEXT)
cusp_OBJECTS = $(am_cusp_OBJECTS)
cusp_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cusp_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cusp_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cutgextract_OBJECTS = cutgextract.$(OBJEXT)
cutgextract_OBJECTS = $(am_cutgextract_OBJECTS)
cutgextract_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cutgextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cutgextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_cutseq_OBJECTS = cutseq.$(OBJEXT)
cutseq_OBJECTS = $(am_cutseq_OBJECTS)
cutseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@cutseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@cutseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dan_OBJECTS = dan.$(OBJEXT)
dan_OBJECTS = $(am_dan_OBJECTS)
dan_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbiblast_OBJECTS = dbiblast.$(OBJEXT)
dbiblast_OBJECTS = $(am_dbiblast_OBJECTS)
dbiblast_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbiblast_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbiblast_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbifasta_OBJECTS = dbifasta.$(OBJEXT)
dbifasta_OBJECTS = $(am_dbifasta_OBJECTS)
dbifasta_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbifasta_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbifasta_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbiflat_OBJECTS = dbiflat.$(OBJEXT)
dbiflat_OBJECTS = $(am_dbiflat_OBJECTS)
dbiflat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbiflat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbiflat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbigcg_OBJECTS = dbigcg.$(OBJEXT)
dbigcg_OBJECTS = $(am_dbigcg_OBJECTS)
dbigcg_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbigcg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbigcg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbxfasta_OBJECTS = dbxfasta.$(OBJEXT)
dbxfasta_OBJECTS = $(am_dbxfasta_OBJECTS)
dbxfasta_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbxfasta_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbxfasta_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbxflat_OBJECTS = dbxflat.$(OBJEXT)
dbxflat_OBJECTS = $(am_dbxflat_OBJECTS)
dbxflat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbxflat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbxflat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dbxgcg_OBJECTS = dbxgcg.$(OBJEXT)
dbxgcg_OBJECTS = $(am_dbxgcg_OBJECTS)
dbxgcg_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dbxgcg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dbxgcg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_degapseq_OBJECTS = degapseq.$(OBJEXT)
degapseq_OBJECTS = $(am_degapseq_OBJECTS)
degapseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@degapseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@degapseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_density_OBJECTS = density.$(OBJEXT)
density_OBJECTS = $(am_density_OBJECTS)
density_LDADD = $(LDADD)
@ISCYGWIN_FALSE@density_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@density_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_descseq_OBJECTS = descseq.$(OBJEXT)
descseq_OBJECTS = $(am_descseq_OBJECTS)
descseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@descseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@descseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_diffseq_OBJECTS = diffseq.$(OBJEXT)
diffseq_OBJECTS = $(am_diffseq_OBJECTS)
diffseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@diffseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@diffseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_digest_OBJECTS = digest.$(OBJEXT)
digest_OBJECTS = $(am_digest_OBJECTS)
digest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@digest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la $(am__DEPENDENCIES_1)
@ISCYGWIN_TRUE@digest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la \
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_distmat_OBJECTS = distmat.$(OBJEXT)
distmat_OBJECTS = $(am_distmat_OBJECTS)
distmat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@distmat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@distmat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dotmatcher_OBJECTS = dotmatcher.$(OBJEXT)
dotmatcher_OBJECTS = $(am_dotmatcher_OBJECTS)
dotmatcher_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dotmatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dotmatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dotpath_OBJECTS = dotpath.$(OBJEXT)
dotpath_OBJECTS = $(am_dotpath_OBJECTS)
dotpath_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dotpath_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dotpath_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dottup_OBJECTS = dottup.$(OBJEXT)
dottup_OBJECTS = $(am_dottup_OBJECTS)
dottup_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dottup_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dottup_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_dreg_OBJECTS = dreg.$(OBJEXT)
dreg_OBJECTS = $(am_dreg_OBJECTS)
dreg_LDADD = $(LDADD)
@ISCYGWIN_FALSE@dreg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@dreg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_edialign_OBJECTS = edialign.$(OBJEXT)
edialign_OBJECTS = $(am_edialign_OBJECTS)
edialign_LDADD = $(LDADD)
@ISCYGWIN_FALSE@edialign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@edialign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_einverted_OBJECTS = einverted.$(OBJEXT)
einverted_OBJECTS = $(am_einverted_OBJECTS)
einverted_LDADD = $(LDADD)
@ISCYGWIN_FALSE@einverted_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@einverted_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_embossdata_OBJECTS = embossdata.$(OBJEXT)
embossdata_OBJECTS = $(am_embossdata_OBJECTS)
embossdata_LDADD = $(LDADD)
@ISCYGWIN_FALSE@embossdata_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@embossdata_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_embossversion_OBJECTS = embossversion.$(OBJEXT)
embossversion_OBJECTS = $(am_embossversion_OBJECTS)
embossversion_LDADD = $(LDADD)
@ISCYGWIN_FALSE@embossversion_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@embossversion_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_emma_OBJECTS = emma.$(OBJEXT)
emma_OBJECTS = $(am_emma_OBJECTS)
emma_LDADD = $(LDADD)
@ISCYGWIN_FALSE@emma_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@emma_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_emowse_OBJECTS = emowse.$(OBJEXT)
emowse_OBJECTS = $(am_emowse_OBJECTS)
emowse_LDADD = $(LDADD)
@ISCYGWIN_FALSE@emowse_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@emowse_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_entrails_OBJECTS = entrails.$(OBJEXT)
entrails_OBJECTS = $(am_entrails_OBJECTS)
entrails_LDADD = $(LDADD)
@ISCYGWIN_FALSE@entrails_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@entrails_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_entret_OBJECTS = entret.$(OBJEXT)
entret_OBJECTS = $(am_entret_OBJECTS)
entret_LDADD = $(LDADD)
@ISCYGWIN_FALSE@entret_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@entret_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_epestfind_OBJECTS = epestfind.$(OBJEXT)
epestfind_OBJECTS = $(am_epestfind_OBJECTS)
epestfind_LDADD = $(LDADD)
@ISCYGWIN_FALSE@epestfind_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@epestfind_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_eprimer3_OBJECTS = eprimer3.$(OBJEXT)
eprimer3_OBJECTS = $(am_eprimer3_OBJECTS)
eprimer3_LDADD = $(LDADD)
@ISCYGWIN_FALSE@eprimer3_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@eprimer3_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_equicktandem_OBJECTS = equicktandem.$(OBJEXT)
equicktandem_OBJECTS = $(am_equicktandem_OBJECTS)
equicktandem_LDADD = $(LDADD)
@ISCYGWIN_FALSE@equicktandem_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@equicktandem_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_est2genome_OBJECTS = est2genome.$(OBJEXT)
est2genome_OBJECTS = $(am_est2genome_OBJECTS)
est2genome_LDADD = $(LDADD)
@ISCYGWIN_FALSE@est2genome_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@est2genome_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_etandem_OBJECTS = etandem.$(OBJEXT)
etandem_OBJECTS = $(am_etandem_OBJECTS)
etandem_LDADD = $(LDADD)
@ISCYGWIN_FALSE@etandem_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@etandem_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_extractalign_OBJECTS = extractalign.$(OBJEXT)
extractalign_OBJECTS = $(am_extractalign_OBJECTS)
extractalign_LDADD = $(LDADD)
@ISCYGWIN_FALSE@extractalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@extractalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_extractfeat_OBJECTS = extractfeat.$(OBJEXT)
extractfeat_OBJECTS = $(am_extractfeat_OBJECTS)
extractfeat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@extractfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@extractfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_extractseq_OBJECTS = extractseq.$(OBJEXT)
extractseq_OBJECTS = $(am_extractseq_OBJECTS)
extractseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@extractseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@extractseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_featcopy_OBJECTS = featcopy.$(OBJEXT)
featcopy_OBJECTS = $(am_featcopy_OBJECTS)
featcopy_LDADD = $(LDADD)
@ISCYGWIN_FALSE@featcopy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@featcopy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_featreport_OBJECTS = featreport.$(OBJEXT)
featreport_OBJECTS = $(am_featreport_OBJECTS)
featreport_LDADD = $(LDADD)
@ISCYGWIN_FALSE@featreport_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@featreport_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_findkm_OBJECTS = findkm.$(OBJEXT)
findkm_OBJECTS = $(am_findkm_OBJECTS)
findkm_LDADD = $(LDADD)
@ISCYGWIN_FALSE@findkm_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@findkm_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_freak_OBJECTS = freak.$(OBJEXT)
freak_OBJECTS = $(am_freak_OBJECTS)
freak_LDADD = $(LDADD)
@ISCYGWIN_FALSE@freak_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@freak_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_fuzznuc_OBJECTS = fuzznuc.$(OBJEXT)
fuzznuc_OBJECTS = $(am_fuzznuc_OBJECTS)
fuzznuc_LDADD = $(LDADD)
@ISCYGWIN_FALSE@fuzznuc_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@fuzznuc_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_fuzzpro_OBJECTS = fuzzpro.$(OBJEXT)
fuzzpro_OBJECTS = $(am_fuzzpro_OBJECTS)
fuzzpro_LDADD = $(LDADD)
@ISCYGWIN_FALSE@fuzzpro_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@fuzzpro_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_fuzztran_OBJECTS = fuzztran.$(OBJEXT)
fuzztran_OBJECTS = $(am_fuzztran_OBJECTS)
fuzztran_LDADD = $(LDADD)
@ISCYGWIN_FALSE@fuzztran_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@fuzztran_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_garnier_OBJECTS = garnier.$(OBJEXT)
garnier_OBJECTS = $(am_garnier_OBJECTS)
garnier_LDADD = $(LDADD)
@ISCYGWIN_FALSE@garnier_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@garnier_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_geecee_OBJECTS = geecee.$(OBJEXT)
geecee_OBJECTS = $(am_geecee_OBJECTS)
geecee_LDADD = $(LDADD)
@ISCYGWIN_FALSE@geecee_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@geecee_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_getorf_OBJECTS = getorf.$(OBJEXT)
getorf_OBJECTS = $(am_getorf_OBJECTS)
getorf_LDADD = $(LDADD)
@ISCYGWIN_FALSE@getorf_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@getorf_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
giep_SOURCES = giep.c
giep_OBJECTS = giep.$(OBJEXT)
giep_LDADD = $(LDADD)
@ISCYGWIN_FALSE@giep_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@giep_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_helixturnhelix_OBJECTS = helixturnhelix.$(OBJEXT)
helixturnhelix_OBJECTS = $(am_helixturnhelix_OBJECTS)
helixturnhelix_LDADD = $(LDADD)
@ISCYGWIN_FALSE@helixturnhelix_DEPENDENCIES =  \
@ISCYGWIN_FALSE@	../nucleus/libnucleus.la ../ajax/libajaxg.la \
@ISCYGWIN_FALSE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_FALSE@	$(am__DEPENDENCIES_1)
@ISCYGWIN_TRUE@helixturnhelix_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_histogramtest_OBJECTS = histogramtest.$(OBJEXT)
histogramtest_OBJECTS = $(am_histogramtest_OBJECTS)
histogramtest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@histogramtest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@histogramtest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_hmoment_OBJECTS = hmoment.$(OBJEXT)
hmoment_OBJECTS = $(am_hmoment_OBJECTS)
hmoment_LDADD = $(LDADD)
@ISCYGWIN_FALSE@hmoment_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@hmoment_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_iep_OBJECTS = iep.$(OBJEXT)
iep_OBJECTS = $(am_iep_OBJECTS)
iep_LDADD = $(LDADD)
@ISCYGWIN_FALSE@iep_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@iep_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_infoalign_OBJECTS = infoalign.$(OBJEXT)
infoalign_OBJECTS = $(am_infoalign_OBJECTS)
infoalign_LDADD = $(LDADD)
@ISCYGWIN_FALSE@infoalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@infoalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_infobase_OBJECTS = infobase.$(OBJEXT)
infobase_OBJECTS = $(am_infobase_OBJECTS)
infobase_LDADD = $(LDADD)
@ISCYGWIN_FALSE@infobase_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@infobase_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_inforesidue_OBJECTS = inforesidue.$(OBJEXT)
inforesidue_OBJECTS = $(am_inforesidue_OBJECTS)
inforesidue_LDADD = $(LDADD)
@ISCYGWIN_FALSE@inforesidue_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@inforesidue_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_infoseq_OBJECTS = infoseq.$(OBJEXT)
infoseq_OBJECTS = $(am_infoseq_OBJECTS)
infoseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@infoseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@infoseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_intconv_OBJECTS = intconv.$(OBJEXT)
intconv_OBJECTS = $(am_intconv_OBJECTS)
intconv_LDADD = $(LDADD)
@ISCYGWIN_FALSE@intconv_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@intconv_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_isochore_OBJECTS = isochore.$(OBJEXT)
isochore_OBJECTS = $(am_isochore_OBJECTS)
isochore_LDADD = $(LDADD)
@ISCYGWIN_FALSE@isochore_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@isochore_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_jaspextract_OBJECTS = jaspextract.$(OBJEXT)
jaspextract_OBJECTS = $(am_jaspextract_OBJECTS)
jaspextract_LDADD = $(LDADD)
@ISCYGWIN_FALSE@jaspextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@jaspextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_jaspscan_OBJECTS = jaspscan.$(OBJEXT)
jaspscan_OBJECTS = $(am_jaspscan_OBJECTS)
jaspscan_LDADD = $(LDADD)
@ISCYGWIN_FALSE@jaspscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@jaspscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_jembossctl_OBJECTS = jembossctl.$(OBJEXT)
jembossctl_OBJECTS = $(am_jembossctl_OBJECTS)
jembossctl_LDADD = $(LDADD)
@ISCYGWIN_FALSE@jembossctl_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@jembossctl_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_lindna_OBJECTS = lindna.$(OBJEXT)
lindna_OBJECTS = $(am_lindna_OBJECTS)
lindna_LDADD = $(LDADD)
@ISCYGWIN_FALSE@lindna_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@lindna_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_listor_OBJECTS = listor.$(OBJEXT)
listor_OBJECTS = $(am_listor_OBJECTS)
listor_LDADD = $(LDADD)
@ISCYGWIN_FALSE@listor_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@listor_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
makenucseq_SOURCES = makenucseq.c
makenucseq_OBJECTS = makenucseq.$(OBJEXT)
makenucseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@makenucseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@makenucseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
makeprotseq_SOURCES = makeprotseq.c
makeprotseq_OBJECTS = makeprotseq.$(OBJEXT)
makeprotseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@makeprotseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@makeprotseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_marscan_OBJECTS = marscan.$(OBJEXT)
marscan_OBJECTS = $(am_marscan_OBJECTS)
marscan_LDADD = $(LDADD)
@ISCYGWIN_FALSE@marscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@marscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_maskambignuc_OBJECTS = maskambignuc.$(OBJEXT)
maskambignuc_OBJECTS = $(am_maskambignuc_OBJECTS)
maskambignuc_LDADD = $(LDADD)
@ISCYGWIN_FALSE@maskambignuc_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@maskambignuc_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_maskambigprot_OBJECTS = maskambigprot.$(OBJEXT)
maskambigprot_OBJECTS = $(am_maskambigprot_OBJECTS)
maskambigprot_LDADD = $(LDADD)
@ISCYGWIN_FALSE@maskambigprot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@maskambigprot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_maskfeat_OBJECTS = maskfeat.$(OBJEXT)
maskfeat_OBJECTS = $(am_maskfeat_OBJECTS)
maskfeat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@maskfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@maskfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_maskseq_OBJECTS = maskseq.$(OBJEXT)
maskseq_OBJECTS = $(am_maskseq_OBJECTS)
maskseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@maskseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@maskseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_matcher_OBJECTS = matcher.$(OBJEXT)
matcher_OBJECTS = $(am_matcher_OBJECTS)
matcher_LDADD = $(LDADD)
@ISCYGWIN_FALSE@matcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@matcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_megamerger_OBJECTS = megamerger.$(OBJEXT)
megamerger_OBJECTS = $(am_megamerger_OBJECTS)
megamerger_LDADD = $(LDADD)
@ISCYGWIN_FALSE@megamerger_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@megamerger_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_merger_OBJECTS = merger.$(OBJEXT)
merger_OBJECTS = $(am_merger_OBJECTS)
merger_LDADD = $(LDADD)
@ISCYGWIN_FALSE@merger_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@merger_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_msbar_OBJECTS = msbar.$(OBJEXT)
msbar_OBJECTS = $(am_msbar_OBJECTS)
msbar_LDADD = $(LDADD)
@ISCYGWIN_FALSE@msbar_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@msbar_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_mwcontam_OBJECTS = mwcontam.$(OBJEXT)
mwcontam_OBJECTS = $(am_mwcontam_OBJECTS)
mwcontam_LDADD = $(LDADD)
@ISCYGWIN_FALSE@mwcontam_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@mwcontam_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_mwfilter_OBJECTS = mwfilter.$(OBJEXT)
mwfilter_OBJECTS = $(am_mwfilter_OBJECTS)
mwfilter_LDADD = $(LDADD)
@ISCYGWIN_FALSE@mwfilter_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@mwfilter_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_needle_OBJECTS = needle.$(OBJEXT)
needle_OBJECTS = $(am_needle_OBJECTS)
needle_LDADD = $(LDADD)
@ISCYGWIN_FALSE@needle_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@needle_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_newcoils_OBJECTS = newcoils.$(OBJEXT)
newcoils_OBJECTS = $(am_newcoils_OBJECTS)
newcoils_LDADD = $(LDADD)
@ISCYGWIN_FALSE@newcoils_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@newcoils_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_newcpgreport_OBJECTS = newcpgreport.$(OBJEXT)
newcpgreport_OBJECTS = $(am_newcpgreport_OBJECTS)
newcpgreport_LDADD = $(LDADD)
@ISCYGWIN_FALSE@newcpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@newcpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_newcpgseek_OBJECTS = newcpgseek.$(OBJEXT)
newcpgseek_OBJECTS = $(am_newcpgseek_OBJECTS)
newcpgseek_LDADD = $(LDADD)
@ISCYGWIN_FALSE@newcpgseek_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@newcpgseek_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_newseq_OBJECTS = newseq.$(OBJEXT)
newseq_OBJECTS = $(am_newseq_OBJECTS)
newseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@newseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@newseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_nohtml_OBJECTS = nohtml.$(OBJEXT)
nohtml_OBJECTS = $(am_nohtml_OBJECTS)
nohtml_LDADD = $(LDADD)
@ISCYGWIN_FALSE@nohtml_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@nohtml_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_noreturn_OBJECTS = noreturn.$(OBJEXT)
noreturn_OBJECTS = $(am_noreturn_OBJECTS)
noreturn_LDADD = $(LDADD)
@ISCYGWIN_FALSE@noreturn_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@noreturn_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_nospace_OBJECTS = nospace.$(OBJEXT)
nospace_OBJECTS = $(am_nospace_OBJECTS)
nospace_LDADD = $(LDADD)
@ISCYGWIN_FALSE@nospace_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@nospace_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_notab_OBJECTS = notab.$(OBJEXT)
notab_OBJECTS = $(am_notab_OBJECTS)
notab_LDADD = $(LDADD)
@ISCYGWIN_FALSE@notab_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@notab_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_notseq_OBJECTS = notseq.$(OBJEXT)
notseq_OBJECTS = $(am_notseq_OBJECTS)
notseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@notseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@notseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_nthseq_OBJECTS = nthseq.$(OBJEXT)
nthseq_OBJECTS = $(am_nthseq_OBJECTS)
nthseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@nthseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@nthseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_nthseqset_OBJECTS = nthseqset.$(OBJEXT)
nthseqset_OBJECTS = $(am_nthseqset_OBJECTS)
nthseqset_LDADD = $(LDADD)
@ISCYGWIN_FALSE@nthseqset_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@nthseqset_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_octanol_OBJECTS = octanol.$(OBJEXT)
octanol_OBJECTS = $(am_octanol_OBJECTS)
octanol_LDADD = $(LDADD)
@ISCYGWIN_FALSE@octanol_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@octanol_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_oddcomp_OBJECTS = oddcomp.$(OBJEXT)
oddcomp_OBJECTS = $(am_oddcomp_OBJECTS)
oddcomp_LDADD = $(LDADD)
@ISCYGWIN_FALSE@oddcomp_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@oddcomp_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_origsplitter_OBJECTS = origsplitter.$(OBJEXT)
origsplitter_OBJECTS = $(am_origsplitter_OBJECTS)
origsplitter_LDADD = $(LDADD)
@ISCYGWIN_FALSE@origsplitter_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@origsplitter_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_origunion_OBJECTS = origunion.$(OBJEXT)
origunion_OBJECTS = $(am_origunion_OBJECTS)
origunion_LDADD = $(LDADD)
@ISCYGWIN_FALSE@origunion_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@origunion_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_palindrome_OBJECTS = palindrome.$(OBJEXT)
palindrome_OBJECTS = $(am_palindrome_OBJECTS)
palindrome_LDADD = $(LDADD)
@ISCYGWIN_FALSE@palindrome_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@palindrome_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pasteseq_OBJECTS = pasteseq.$(OBJEXT)
pasteseq_OBJECTS = $(am_pasteseq_OBJECTS)
pasteseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pasteseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pasteseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_patmatdb_OBJECTS = patmatdb.$(OBJEXT)
patmatdb_OBJECTS = $(am_patmatdb_OBJECTS)
patmatdb_LDADD = $(LDADD)
@ISCYGWIN_FALSE@patmatdb_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@patmatdb_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_patmatmotifs_OBJECTS = patmatmotifs.$(OBJEXT)
patmatmotifs_OBJECTS = $(am_patmatmotifs_OBJECTS)
patmatmotifs_LDADD = $(LDADD)
@ISCYGWIN_FALSE@patmatmotifs_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@patmatmotifs_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_patmattest_OBJECTS = patmattest.$(OBJEXT)
patmattest_OBJECTS = $(am_patmattest_OBJECTS)
patmattest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@patmattest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@patmattest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepcoil_OBJECTS = pepcoil.$(OBJEXT)
pepcoil_OBJECTS = $(am_pepcoil_OBJECTS)
pepcoil_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepcoil_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepcoil_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepinfo_OBJECTS = pepinfo.$(OBJEXT)
pepinfo_OBJECTS = $(am_pepinfo_OBJECTS)
pepinfo_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepinfo_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepinfo_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepnet_OBJECTS = pepnet.$(OBJEXT)
pepnet_OBJECTS = $(am_pepnet_OBJECTS)
pepnet_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepnet_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepnet_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepstats_OBJECTS = pepstats.$(OBJEXT)
pepstats_OBJECTS = $(am_pepstats_OBJECTS)
pepstats_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepstats_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepstats_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepwheel_OBJECTS = pepwheel.$(OBJEXT)
pepwheel_OBJECTS = $(am_pepwheel_OBJECTS)
pepwheel_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepwheel_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepwheel_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepwindow_OBJECTS = pepwindow.$(OBJEXT)
pepwindow_OBJECTS = $(am_pepwindow_OBJECTS)
pepwindow_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepwindow_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepwindow_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pepwindowall_OBJECTS = pepwindowall.$(OBJEXT)
pepwindowall_OBJECTS = $(am_pepwindowall_OBJECTS)
pepwindowall_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pepwindowall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pepwindowall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_plotcon_OBJECTS = plotcon.$(OBJEXT)
plotcon_OBJECTS = $(am_plotcon_OBJECTS)
plotcon_LDADD = $(LDADD)
@ISCYGWIN_FALSE@plotcon_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@plotcon_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_plotorf_OBJECTS = plotorf.$(OBJEXT)
plotorf_OBJECTS = $(am_plotorf_OBJECTS)
plotorf_LDADD = $(LDADD)
@ISCYGWIN_FALSE@plotorf_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@plotorf_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_polydot_OBJECTS = polydot.$(OBJEXT)
polydot_OBJECTS = $(am_polydot_OBJECTS)
polydot_LDADD = $(LDADD)
@ISCYGWIN_FALSE@polydot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@polydot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_preg_OBJECTS = preg.$(OBJEXT)
preg_OBJECTS = $(am_preg_OBJECTS)
preg_LDADD = $(LDADD)
@ISCYGWIN_FALSE@preg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@preg_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_prettyplot_OBJECTS = prettyplot.$(OBJEXT)
prettyplot_OBJECTS = $(am_prettyplot_OBJECTS)
prettyplot_LDADD = $(LDADD)
@ISCYGWIN_FALSE@prettyplot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@prettyplot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_prettyseq_OBJECTS = prettyseq.$(OBJEXT)
prettyseq_OBJECTS = $(am_prettyseq_OBJECTS)
prettyseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@prettyseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@prettyseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_prima_OBJECTS = prima.$(OBJEXT)
prima_OBJECTS = $(am_prima_OBJECTS)
prima_LDADD = $(LDADD)
@ISCYGWIN_FALSE@prima_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@prima_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_primers_OBJECTS = primers.$(OBJEXT)
primers_OBJECTS = $(am_primers_OBJECTS)
primers_LDADD = $(LDADD)
@ISCYGWIN_FALSE@primers_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@primers_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_primersearch_OBJECTS = primersearch.$(OBJEXT)
primersearch_OBJECTS = $(am_primersearch_OBJECTS)
primersearch_LDADD = $(LDADD)
@ISCYGWIN_FALSE@primersearch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@primersearch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_printsextract_OBJECTS = printsextract.$(OBJEXT)
printsextract_OBJECTS = $(am_printsextract_OBJECTS)
printsextract_LDADD = $(LDADD)
@ISCYGWIN_FALSE@printsextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@printsextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_profit_OBJECTS = profit.$(OBJEXT)
profit_OBJECTS = $(am_profit_OBJECTS)
profit_LDADD = $(LDADD)
@ISCYGWIN_FALSE@profit_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@profit_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_prophecy_OBJECTS = prophecy.$(OBJEXT)
prophecy_OBJECTS = $(am_prophecy_OBJECTS)
prophecy_LDADD = $(LDADD)
@ISCYGWIN_FALSE@prophecy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@prophecy_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_prophet_OBJECTS = prophet.$(OBJEXT)
prophet_OBJECTS = $(am_prophet_OBJECTS)
prophet_LDADD = $(LDADD)
@ISCYGWIN_FALSE@prophet_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@prophet_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_prosextract_OBJECTS = prosextract.$(OBJEXT)
prosextract_OBJECTS = $(am_prosextract_OBJECTS)
prosextract_LDADD = $(LDADD)
@ISCYGWIN_FALSE@prosextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@prosextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_pscan_OBJECTS = pscan.$(OBJEXT)
pscan_OBJECTS = $(am_pscan_OBJECTS)
pscan_LDADD = $(LDADD)
@ISCYGWIN_FALSE@pscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@pscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_psiphi_OBJECTS = psiphi.$(OBJEXT)
psiphi_OBJECTS = $(am_psiphi_OBJECTS)
psiphi_LDADD = $(LDADD)
@ISCYGWIN_FALSE@psiphi_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@psiphi_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_rebaseextract_OBJECTS = rebaseextract.$(OBJEXT)
rebaseextract_OBJECTS = $(am_rebaseextract_OBJECTS)
rebaseextract_LDADD = $(LDADD)
@ISCYGWIN_FALSE@rebaseextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@rebaseextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_recoder_OBJECTS = recoder.$(OBJEXT)
recoder_OBJECTS = $(am_recoder_OBJECTS)
recoder_LDADD = $(LDADD)
@ISCYGWIN_FALSE@recoder_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@recoder_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_redata_OBJECTS = redata.$(OBJEXT)
redata_OBJECTS = $(am_redata_OBJECTS)
redata_LDADD = $(LDADD)
@ISCYGWIN_FALSE@redata_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@redata_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_remap_OBJECTS = remap.$(OBJEXT)
remap_OBJECTS = $(am_remap_OBJECTS)
remap_LDADD = $(LDADD)
@ISCYGWIN_FALSE@remap_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@remap_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_restover_OBJECTS = restover.$(OBJEXT)
restover_OBJECTS = $(am_restover_OBJECTS)
restover_LDADD = $(LDADD)
@ISCYGWIN_FALSE@restover_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@restover_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_restrict_OBJECTS = restrict.$(OBJEXT)
restrict_OBJECTS = $(am_restrict_OBJECTS)
restrict_LDADD = $(LDADD)
@ISCYGWIN_FALSE@restrict_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@restrict_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_revseq_OBJECTS = revseq.$(OBJEXT)
revseq_OBJECTS = $(am_revseq_OBJECTS)
revseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@revseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@revseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seealso_OBJECTS = seealso.$(OBJEXT)
seealso_OBJECTS = $(am_seealso_OBJECTS)
seealso_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seealso_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seealso_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqinfo_OBJECTS = seqinfo.$(OBJEXT)
seqinfo_OBJECTS = $(am_seqinfo_OBJECTS)
seqinfo_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqinfo_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqinfo_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqmatchall_OBJECTS = seqmatchall.$(OBJEXT)
seqmatchall_OBJECTS = $(am_seqmatchall_OBJECTS)
seqmatchall_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqmatchall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqmatchall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqret_OBJECTS = seqret.$(OBJEXT)
seqret_OBJECTS = $(am_seqret_OBJECTS)
seqret_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqret_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqret_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqretall_OBJECTS = seqretall.$(OBJEXT)
seqretall_OBJECTS = $(am_seqretall_OBJECTS)
seqretall_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqretall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqretall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqretallfeat_OBJECTS = seqretallfeat.$(OBJEXT)
seqretallfeat_OBJECTS = $(am_seqretallfeat_OBJECTS)
seqretallfeat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqretallfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqretallfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqretset_OBJECTS = seqretset.$(OBJEXT)
seqretset_OBJECTS = $(am_seqretset_OBJECTS)
seqretset_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqretset_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqretset_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqretsetall_OBJECTS = seqretsetall.$(OBJEXT)
seqretsetall_OBJECTS = $(am_seqretsetall_OBJECTS)
seqretsetall_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqretsetall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqretsetall_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqretsingle_OBJECTS = seqretsingle.$(OBJEXT)
seqretsingle_OBJECTS = $(am_seqretsingle_OBJECTS)
seqretsingle_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqretsingle_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqretsingle_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqretsplit_OBJECTS = seqretsplit.$(OBJEXT)
seqretsplit_OBJECTS = $(am_seqretsplit_OBJECTS)
seqretsplit_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqretsplit_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqretsplit_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_seqrettype_OBJECTS = seqrettype.$(OBJEXT)
seqrettype_OBJECTS = $(am_seqrettype_OBJECTS)
seqrettype_LDADD = $(LDADD)
@ISCYGWIN_FALSE@seqrettype_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@seqrettype_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_showalign_OBJECTS = showalign.$(OBJEXT)
showalign_OBJECTS = $(am_showalign_OBJECTS)
showalign_LDADD = $(LDADD)
@ISCYGWIN_FALSE@showalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@showalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_showdb_OBJECTS = showdb.$(OBJEXT)
showdb_OBJECTS = $(am_showdb_OBJECTS)
showdb_LDADD = $(LDADD)
@ISCYGWIN_FALSE@showdb_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@showdb_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_showfeat_OBJECTS = showfeat.$(OBJEXT)
showfeat_OBJECTS = $(am_showfeat_OBJECTS)
showfeat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@showfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@showfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_showorf_OBJECTS = showorf.$(OBJEXT)
showorf_OBJECTS = $(am_showorf_OBJECTS)
showorf_LDADD = $(LDADD)
@ISCYGWIN_FALSE@showorf_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@showorf_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_showpep_OBJECTS = showpep.$(OBJEXT)
showpep_OBJECTS = $(am_showpep_OBJECTS)
showpep_LDADD = $(LDADD)
@ISCYGWIN_FALSE@showpep_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@showpep_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_showseq_OBJECTS = showseq.$(OBJEXT)
showseq_OBJECTS = $(am_showseq_OBJECTS)
showseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@showseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@showseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_shuffleseq_OBJECTS = shuffleseq.$(OBJEXT)
shuffleseq_OBJECTS = $(am_shuffleseq_OBJECTS)
shuffleseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@shuffleseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@shuffleseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_sigcleave_OBJECTS = sigcleave.$(OBJEXT)
sigcleave_OBJECTS = $(am_sigcleave_OBJECTS)
sigcleave_LDADD = $(LDADD)
@ISCYGWIN_FALSE@sigcleave_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@sigcleave_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_silent_OBJECTS = silent.$(OBJEXT)
silent_OBJECTS = $(am_silent_OBJECTS)
silent_LDADD = $(LDADD)
@ISCYGWIN_FALSE@silent_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@silent_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_sirna_OBJECTS = sirna.$(OBJEXT)
sirna_OBJECTS = $(am_sirna_OBJECTS)
sirna_LDADD = $(LDADD)
@ISCYGWIN_FALSE@sirna_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@sirna_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_sixpack_OBJECTS = sixpack.$(OBJEXT)
sixpack_OBJECTS = $(am_sixpack_OBJECTS)
sixpack_LDADD = $(LDADD)
@ISCYGWIN_FALSE@sixpack_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@sixpack_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_sizeseq_OBJECTS = sizeseq.$(OBJEXT)
sizeseq_OBJECTS = $(am_sizeseq_OBJECTS)
sizeseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@sizeseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@sizeseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_skipredundant_OBJECTS = skipredundant.$(OBJEXT)
skipredundant_OBJECTS = $(am_skipredundant_OBJECTS)
skipredundant_LDADD = $(LDADD)
@ISCYGWIN_FALSE@skipredundant_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@skipredundant_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_skipseq_OBJECTS = skipseq.$(OBJEXT)
skipseq_OBJECTS = $(am_skipseq_OBJECTS)
skipseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@skipseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@skipseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
splitsource_SOURCES = splitsource.c
splitsource_OBJECTS = splitsource.$(OBJEXT)
splitsource_LDADD = $(LDADD)
@ISCYGWIN_FALSE@splitsource_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@splitsource_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_splitter_OBJECTS = splitter.$(OBJEXT)
splitter_OBJECTS = $(am_splitter_OBJECTS)
splitter_LDADD = $(LDADD)
@ISCYGWIN_FALSE@splitter_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@splitter_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_stretcher_OBJECTS = stretcher.$(OBJEXT)
stretcher_OBJECTS = $(am_stretcher_OBJECTS)
stretcher_LDADD = $(LDADD)
@ISCYGWIN_FALSE@stretcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@stretcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_stssearch_OBJECTS = stssearch.$(OBJEXT)
stssearch_OBJECTS = $(am_stssearch_OBJECTS)
stssearch_LDADD = $(LDADD)
@ISCYGWIN_FALSE@stssearch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@stssearch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_supermatcher_OBJECTS = supermatcher.$(OBJEXT)
supermatcher_OBJECTS = $(am_supermatcher_OBJECTS)
supermatcher_LDADD = $(LDADD)
@ISCYGWIN_FALSE@supermatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@supermatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_syco_OBJECTS = syco.$(OBJEXT)
syco_OBJECTS = $(am_syco_OBJECTS)
syco_LDADD = $(LDADD)
@ISCYGWIN_FALSE@syco_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@syco_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_tcode_OBJECTS = tcode.$(OBJEXT)
tcode_OBJECTS = $(am_tcode_OBJECTS)
tcode_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tcode_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@tcode_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_testplot_OBJECTS = testplot.$(OBJEXT)
testplot_OBJECTS = $(am_testplot_OBJECTS)
testplot_LDADD = $(LDADD)
@ISCYGWIN_FALSE@testplot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@testplot_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_textsearch_OBJECTS = textsearch.$(OBJEXT)
textsearch_OBJECTS = $(am_textsearch_OBJECTS)
textsearch_LDADD = $(LDADD)
@ISCYGWIN_FALSE@textsearch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@textsearch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_tfextract_OBJECTS = tfextract.$(OBJEXT)
tfextract_OBJECTS = $(am_tfextract_OBJECTS)
tfextract_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tfextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@tfextract_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_tfm_OBJECTS = tfm.$(OBJEXT)
tfm_OBJECTS = $(am_tfm_OBJECTS)
tfm_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tfm_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@tfm_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_tfscan_OBJECTS = tfscan.$(OBJEXT)
tfscan_OBJECTS = $(am_tfscan_OBJECTS)
tfscan_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tfscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@tfscan_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_tmap_OBJECTS = tmap.$(OBJEXT)
tmap_OBJECTS = $(am_tmap_OBJECTS)
tmap_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tmap_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@tmap_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_tranalign_OBJECTS = tranalign.$(OBJEXT)
tranalign_OBJECTS = $(am_tranalign_OBJECTS)
tranalign_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tranalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@tranalign_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_transeq_OBJECTS = transeq.$(OBJEXT)
transeq_OBJECTS = $(am_transeq_OBJECTS)
transeq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@transeq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@transeq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_treetypedisplay_OBJECTS = treetypedisplay.$(OBJEXT)
treetypedisplay_OBJECTS = $(am_treetypedisplay_OBJECTS)
treetypedisplay_LDADD = $(LDADD)
@ISCYGWIN_FALSE@treetypedisplay_DEPENDENCIES =  \
@ISCYGWIN_FALSE@	../nucleus/libnucleus.la ../ajax/libajaxg.la \
@ISCYGWIN_FALSE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_FALSE@	$(am__DEPENDENCIES_1)
@ISCYGWIN_TRUE@treetypedisplay_DEPENDENCIES =  \
@ISCYGWIN_TRUE@	../nucleus/libnucleus.la ../ajax/libajax.la \
@ISCYGWIN_TRUE@	../plplot/libeplplot.la
am_trimest_OBJECTS = trimest.$(OBJEXT)
trimest_OBJECTS = $(am_trimest_OBJECTS)
trimest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@trimest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@trimest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_trimseq_OBJECTS = trimseq.$(OBJEXT)
trimseq_OBJECTS = $(am_trimseq_OBJECTS)
trimseq_LDADD = $(LDADD)
@ISCYGWIN_FALSE@trimseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@trimseq_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_trimspace_OBJECTS = trimspace.$(OBJEXT)
trimspace_OBJECTS = $(am_trimspace_OBJECTS)
trimspace_LDADD = $(LDADD)
@ISCYGWIN_FALSE@trimspace_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@trimspace_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
am_tryptic_digest_OBJECTS = tryptic_digest.$(OBJEXT)
tryptic_digest_OBJECTS = $(am_tryptic_digest_OBJECTS)
tryptic_digest_LDADD = $(LDADD)
@ISCYGWIN_FALSE@tryptic_digest_DEPENDENCIES =  \
@ISCYGWIN_FALSE@	../nucleus/libnucleus.la ../ajax/libajaxg.la \
@ISCYGWIN_FALSE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@tryptic_digest_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
am_twofeat_OBJECTS = twofeat.$(OBJEXT)
twofeat_OBJECTS = $(am_twofeat_OBJECTS)
twofeat_LDADD = $(LDADD)
@ISCYGWIN_FALSE@twofeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@twofeat_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_union_OBJECTS = union.$(OBJEXT)
union_OBJECTS = $(am_union_OBJECTS)
union_LDADD = $(LDADD)
@ISCYGWIN_FALSE@union_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@union_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_vectorstrip_OBJECTS = vectorstrip.$(OBJEXT)
vectorstrip_OBJECTS = $(am_vectorstrip_OBJECTS)
vectorstrip_LDADD = $(LDADD)
@ISCYGWIN_FALSE@vectorstrip_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@vectorstrip_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_water_OBJECTS = water.$(OBJEXT)
water_OBJECTS = $(am_water_OBJECTS)
water_LDADD = $(LDADD)
@ISCYGWIN_FALSE@water_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@water_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_whichdb_OBJECTS = whichdb.$(OBJEXT)
whichdb_OBJECTS = $(am_whichdb_OBJECTS)
whichdb_LDADD = $(LDADD)
@ISCYGWIN_FALSE@whichdb_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@whichdb_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_wobble_OBJECTS = wobble.$(OBJEXT)
wobble_OBJECTS = $(am_wobble_OBJECTS)
wobble_LDADD = $(LDADD)
@ISCYGWIN_FALSE@wobble_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@wobble_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_wordcount_OBJECTS = wordcount.$(OBJEXT)
wordcount_OBJECTS = $(am_wordcount_OBJECTS)
wordcount_LDADD = $(LDADD)
@ISCYGWIN_FALSE@wordcount_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@wordcount_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_wordfinder_OBJECTS = wordfinder.$(OBJEXT)
wordfinder_OBJECTS = $(am_wordfinder_OBJECTS)
wordfinder_LDADD = $(LDADD)
@ISCYGWIN_FALSE@wordfinder_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@wordfinder_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_wordmatch_OBJECTS = wordmatch.$(OBJEXT)
wordmatch_OBJECTS = $(am_wordmatch_OBJECTS)
wordmatch_LDADD = $(LDADD)
@ISCYGWIN_FALSE@wordmatch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@wordmatch_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_wossname_OBJECTS = wossname.$(OBJEXT)
wossname_OBJECTS = $(am_wossname_OBJECTS)
wossname_LDADD = $(LDADD)
@ISCYGWIN_FALSE@wossname_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@wossname_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
am_yank_OBJECTS = yank.$(OBJEXT)
yank_OBJECTS = $(am_yank_OBJECTS)
yank_LDADD = $(LDADD)
@ISCYGWIN_FALSE@yank_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_FALSE@	../ajax/libajaxg.la ../ajax/libajax.la \
@ISCYGWIN_FALSE@	../plplot/libeplplot.la
@ISCYGWIN_TRUE@yank_DEPENDENCIES = ../nucleus/libnucleus.la \
@ISCYGWIN_TRUE@	../ajax/libajax.la ../plplot/libeplplot.la
@ISCYGWIN_TRUE@	$(am__DEPENDENCIES_1)
DEFAULT_INCLUDES = -I.@am__isrc@
depcomp = $(SHELL) $(top_srcdir)/depcomp
am__depfiles_maybe = depfiles

	$(dbifasta_SOURCES) $(dbiflat_SOURCES) $(dbigcg_SOURCES) \
	$(dbxfasta_SOURCES) $(dbxflat_SOURCES) $(dbxgcg_SOURCES) \
	$(degapseq_SOURCES) $(density_SOURCES) $(descseq_SOURCES) \
	$(diffseq_SOURCES) $(distmat_SOURCES) $(dotmatcher_SOURCES) \
	$(dotpath_SOURCES) $(dottup_SOURCES) $(dreg_SOURCES) \
	$(edialign_SOURCES) $(einverted_SOURCES) $(embossdata_SOURCES) \
	$(embossversion_SOURCES) $(emma_SOURCES) $(emowse_SOURCES) \
	$(entrails_SOURCES) $(entret_SOURCES) $(epestfind_SOURCES) \
	$(eprimer3_SOURCES) $(equicktandem_SOURCES) \
	$(est2genome_SOURCES) $(etandem_SOURCES) \
	$(extractalign_SOURCES) $(extractfeat_SOURCES) \
	$(extractseq_SOURCES) $(featcopy_SOURCES) \
	$(featreport_SOURCES) $(findkm_SOURCES) $(freak_SOURCES) \
	$(fuzznuc_SOURCES) $(fuzzpro_SOURCES) $(fuzztran_SOURCES) \
	$(garnier_SOURCES) $(geecee_SOURCES) $(getorf_SOURCES) giep.c \
	$(helixturnhelix_SOURCES) $(histogramtest_SOURCES) \
	$(hmoment_SOURCES) $(iep_SOURCES) $(infoalign_SOURCES) \
	$(infobase_SOURCES) $(inforesidue_SOURCES) $(infoseq_SOURCES) \
	$(intconv_SOURCES) $(isochore_SOURCES) $(jaspextract_SOURCES) \
	$(jaspscan_SOURCES) $(jembossctl_SOURCES) $(lindna_SOURCES) \
	$(listor_SOURCES) makenucseq.c makeprotseq.c \
	$(marscan_SOURCES) $(maskambignuc_SOURCES) \
	$(maskambigprot_SOURCES) $(maskfeat_SOURCES) \
	$(maskseq_SOURCES) $(matcher_SOURCES) $(megamerger_SOURCES) \
	$(merger_SOURCES) $(msbar_SOURCES) $(mwcontam_SOURCES) \
	$(mwfilter_SOURCES) $(needle_SOURCES) $(newcoils_SOURCES) \
	$(newcpgreport_SOURCES) $(newcpgseek_SOURCES) \
	$(newseq_SOURCES) $(nohtml_SOURCES) $(noreturn_SOURCES) \
	$(nospace_SOURCES) $(notab_SOURCES) $(notseq_SOURCES) \
	$(nthseq_SOURCES) $(nthseqset_SOURCES) $(octanol_SOURCES) \
	$(oddcomp_SOURCES) $(origsplitter_SOURCES) \
	$(origunion_SOURCES) $(palindrome_SOURCES) $(pasteseq_SOURCES) \
	$(patmatdb_SOURCES) $(patmatmotifs_SOURCES) \
	$(patmattest_SOURCES) $(pepcoil_SOURCES) $(pepinfo_SOURCES) \

	$(tfextract_SOURCES) $(tfm_SOURCES) $(tfscan_SOURCES) \
	$(tmap_SOURCES) $(tranalign_SOURCES) $(transeq_SOURCES) \
	$(treetypedisplay_SOURCES) $(trimest_SOURCES) \
	$(trimseq_SOURCES) $(trimspace_SOURCES) \
	$(tryptic_digest_SOURCES) $(twofeat_SOURCES) $(union_SOURCES) \
	$(vectorstrip_SOURCES) $(water_SOURCES) $(whichdb_SOURCES) \
	$(wobble_SOURCES) $(wordcount_SOURCES) $(wordfinder_SOURCES) \
	$(wordmatch_SOURCES) $(wossname_SOURCES) $(yank_SOURCES)
DIST_SOURCES = $(aaindexextract_SOURCES) $(abiview_SOURCES) \
	$(acdc_SOURCES) $(acdlog_SOURCES) $(acdpretty_SOURCES) \
	$(acdtable_SOURCES) $(acdtrace_SOURCES) $(acdvalid_SOURCES) \

	$(dbifasta_SOURCES) $(dbiflat_SOURCES) $(dbigcg_SOURCES) \
	$(dbxfasta_SOURCES) $(dbxflat_SOURCES) $(dbxgcg_SOURCES) \
	$(degapseq_SOURCES) $(density_SOURCES) $(descseq_SOURCES) \
	$(diffseq_SOURCES) $(distmat_SOURCES) $(dotmatcher_SOURCES) \
	$(dotpath_SOURCES) $(dottup_SOURCES) $(dreg_SOURCES) \
	$(edialign_SOURCES) $(einverted_SOURCES) $(embossdata_SOURCES) \
	$(embossversion_SOURCES) $(emma_SOURCES) $(emowse_SOURCES) \
	$(entrails_SOURCES) $(entret_SOURCES) $(epestfind_SOURCES) \
	$(eprimer3_SOURCES) $(equicktandem_SOURCES) \
	$(est2genome_SOURCES) $(etandem_SOURCES) \
	$(extractalign_SOURCES) $(extractfeat_SOURCES) \
	$(extractseq_SOURCES) $(featcopy_SOURCES) \
	$(featreport_SOURCES) $(findkm_SOURCES) $(freak_SOURCES) \
	$(fuzznuc_SOURCES) $(fuzzpro_SOURCES) $(fuzztran_SOURCES) \
	$(garnier_SOURCES) $(geecee_SOURCES) $(getorf_SOURCES) giep.c \
	$(helixturnhelix_SOURCES) $(histogramtest_SOURCES) \
	$(hmoment_SOURCES) $(iep_SOURCES) $(infoalign_SOURCES) \
	$(infobase_SOURCES) $(inforesidue_SOURCES) $(infoseq_SOURCES) \
	$(intconv_SOURCES) $(isochore_SOURCES) $(jaspextract_SOURCES) \
	$(jaspscan_SOURCES) $(jembossctl_SOURCES) $(lindna_SOURCES) \
	$(listor_SOURCES) makenucseq.c makeprotseq.c \
	$(marscan_SOURCES) $(maskambignuc_SOURCES) \
	$(maskambigprot_SOURCES) $(maskfeat_SOURCES) \
	$(maskseq_SOURCES) $(matcher_SOURCES) $(megamerger_SOURCES) \
	$(merger_SOURCES) $(msbar_SOURCES) $(mwcontam_SOURCES) \
	$(mwfilter_SOURCES) $(needle_SOURCES) $(newcoils_SOURCES) \
	$(newcpgreport_SOURCES) $(newcpgseek_SOURCES) \
	$(newseq_SOURCES) $(nohtml_SOURCES) $(noreturn_SOURCES) \
	$(nospace_SOURCES) $(notab_SOURCES) $(notseq_SOURCES) \
	$(nthseq_SOURCES) $(nthseqset_SOURCES) $(octanol_SOURCES) \
	$(oddcomp_SOURCES) $(origsplitter_SOURCES) \
	$(origunion_SOURCES) $(palindrome_SOURCES) $(pasteseq_SOURCES) \
	$(patmatdb_SOURCES) $(patmatmotifs_SOURCES) \
	$(patmattest_SOURCES) $(pepcoil_SOURCES) $(pepinfo_SOURCES) \

	$(tfextract_SOURCES) $(tfm_SOURCES) $(tfscan_SOURCES) \
	$(tmap_SOURCES) $(tranalign_SOURCES) $(transeq_SOURCES) \
	$(treetypedisplay_SOURCES) $(trimest_SOURCES) \
	$(trimseq_SOURCES) $(trimspace_SOURCES) \
	$(tryptic_digest_SOURCES) $(twofeat_SOURCES) $(union_SOURCES) \
	$(vectorstrip_SOURCES) $(water_SOURCES) $(whichdb_SOURCES) \
	$(wobble_SOURCES) $(wordcount_SOURCES) $(wordfinder_SOURCES) \
	$(wordmatch_SOURCES) $(wossname_SOURCES) $(yank_SOURCES)
RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
	html-recursive info-recursive install-data-recursive \
	install-dvi-recursive install-exec-recursive \

INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
ISAIXIA64 = @ISAIXIA64@
ISCYGWIN = @ISCYGWIN@
JAVA_OK = @JAVA_OK@
LD = @LD@
LDFLAGS = @LDFLAGS@
LIBOBJS = @LIBOBJS@

PACKAGE_NAME = @PACKAGE_NAME@
PACKAGE_STRING = @PACKAGE_STRING@
PACKAGE_TARNAME = @PACKAGE_TARNAME@
PACKAGE_URL = @PACKAGE_URL@
PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
PCRE_DATE = @PCRE_DATE@

SHELL = @SHELL@
STRIP = @STRIP@
VERSION = @VERSION@
XLIB = @XLIB@
XMKMF = @XMKMF@
X_CFLAGS = @X_CFLAGS@
X_EXTRA_LIBS = @X_EXTRA_LIBS@

docdir = @docdir@
dvidir = @dvidir@
exec_prefix = @exec_prefix@
havejavac = @havejavac@
host = @host@
host_alias = @host_alias@
host_cpu = @host_cpu@

libexecdir = @libexecdir@
localedir = @localedir@
localstatedir = @localstatedir@
lt_ECHO = @lt_ECHO@
mandir = @mandir@
mkdir_p = @mkdir_p@
oldincludedir = @oldincludedir@

density_SOURCES = density.c
descseq_SOURCES = descseq.c
diffseq_SOURCES = diffseq.c
tryptic_digest_SOURCES = tryptic_digest.c
distmat_SOURCES = distmat.c
dotmatcher_SOURCES = dotmatcher.c
dotpath_SOURCES = dotpath.c

diffseq$(EXEEXT): $(diffseq_OBJECTS) $(diffseq_DEPENDENCIES) 
	@rm -f diffseq$(EXEEXT)
	$(LINK) $(diffseq_OBJECTS) $(diffseq_LDADD) $(LIBS)
digest$(EXEEXT): $(digest_OBJECTS) $(digest_DEPENDENCIES) 
	@rm -f digest$(EXEEXT)
	$(LINK) $(digest_OBJECTS) $(digest_LDADD) $(LIBS)
distmat$(EXEEXT): $(distmat_OBJECTS) $(distmat_DEPENDENCIES) 
	@rm -f distmat$(EXEEXT)
	$(LINK) $(distmat_OBJECTS) $(distmat_LDADD) $(LIBS)

trimspace$(EXEEXT): $(trimspace_OBJECTS) $(trimspace_DEPENDENCIES) 
	@rm -f trimspace$(EXEEXT)
	$(LINK) $(trimspace_OBJECTS) $(trimspace_LDADD) $(LIBS)
tryptic_digest$(EXEEXT): $(tryptic_digest_OBJECTS) $(tryptic_digest_DEPENDENCIES) 
	@rm -f tryptic_digest$(EXEEXT)
	$(LINK) $(tryptic_digest_OBJECTS) $(tryptic_digest_LDADD) $(LIBS)
twofeat$(EXEEXT): $(twofeat_OBJECTS) $(twofeat_DEPENDENCIES) 
	@rm -f twofeat$(EXEEXT)
	$(LINK) $(twofeat_OBJECTS) $(twofeat_LDADD) $(LIBS)

@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/density.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/descseq.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/diffseq.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/digest.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/distmat.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/dotmatcher.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/dotpath.Po@am__quote@

@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/trimest.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/trimseq.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/trimspace.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/tryptic_digest.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/twofeat.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/union.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/vectorstrip.Po@am__quote@

#     (which will cause the Makefiles to be regenerated when you run `make');
# (2) otherwise, pass the desired values on the `make' command line.
$(RECURSIVE_TARGETS):
	@fail= failcom='exit 1'; \
	for f in x $$MAKEFLAGS; do \
	  case $$f in \
	    *=* | --[!k]*);; \

	fi; test -z "$$fail"

$(RECURSIVE_CLEAN_TARGETS):
	@fail= failcom='exit 1'; \
	for f in x $$MAKEFLAGS; do \
	  case $$f in \
	    *=* | --[!k]*);; \

Return to bug 330507