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Gentoo's Bugzilla – Attachment 236167 Details for
Bug 324969
sci-chemistry/tinker: fails with forced --as-needed
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Build log
tinker-6.0:20100621-154430.log (text/plain), 97.51 KB, created by
Diego Elio Pettenò (RETIRED)
on 2010-06-21 15:53:11 UTC
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Description:
Build log
Filename:
MIME Type:
Creator:
Diego Elio Pettenò (RETIRED)
Created:
2010-06-21 15:53:11 UTC
Size:
97.51 KB
patch
obsolete
> * CPV: sci-chemistry/tinker-6.0 > * REPO: gentoo > * USE: elibc_glibc kernel_linux test userland_GNU x86 > * You need one of these Fortran Compilers: gfortran ifc > * Installed are: gfortran ifort >>>> Unpacking source... >>>> Unpacking tinker-6.0.tar.gz to /var/tmp/portage/sci-chemistry/tinker-6.0/work >>>> Source unpacked in /var/tmp/portage/sci-chemistry/tinker-6.0/work >>>> Preparing source in /var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source ... >Package apbs was not found in the pkg-config search path. >Perhaps you should add the directory containing `apbs.pc' >to the PKG_CONFIG_PATH environment variable >No package 'apbs' found >make -j14 -f ../make/Makefile F77=gfortran 'CC=i686-pc-linux-gnu-gcc -c' F77FLAGS=-c 'OPTFLAGS=-O2 -pipe' 'LINKFLAGS=-Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/' 'INCLUDEDIR=-I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/usr/include' 'LIBS= -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm' >gfortran -c -O2 -pipe alchemy.f >gfortran -c -O2 -pipe active.f >gfortran -c -O2 -pipe analysis.f >gfortran -c -O2 -pipe analyze.f >gfortran -c -O2 -pipe angles.f >gfortran -c -O2 -pipe anneal.f >gfortran -c -O2 -pipe archive.f >gfortran -c -O2 -pipe attach.f >gfortran -c -O2 -pipe basefile.f >gfortran -c -O2 -pipe beeman.f >gfortran -c -O2 -pipe bicubic.f >gfortran -c -O2 -pipe bitors.f >gfortran -c -O2 -pipe bonds.f >gfortran -c -O2 -pipe born.f >gfortran -c -O2 -pipe bounds.f >gfortran -c -O2 -pipe bspline.f >gfortran -c -O2 -pipe calendar.f >gfortran -c -O2 -pipe center.f >gfortran -c -O2 -pipe chkpole.f >gfortran -c -O2 -pipe chkring.f >gfortran -c -O2 -pipe chkxyz.f >gfortran -c -O2 -pipe cholesky.f >gfortran -c -O2 -pipe clock.f >gfortran -c -O2 -pipe cluster.f >gfortran -c -O2 -pipe column.f >gfortran -c -O2 -pipe command.f >gfortran -c -O2 -pipe connect.f >gfortran -c -O2 -pipe connolly.f >gfortran -c -O2 -pipe control.f >gfortran -c -O2 -pipe correlate.f >gfortran -c -O2 -pipe crystal.f >gfortran -c -O2 -pipe cspline.f >gfortran -c -O2 -pipe cutoffs.f >gfortran -c -O2 -pipe deflate.f >gfortran -c -O2 -pipe delete.f >gfortran -c -O2 -pipe diagq.f >gfortran -c -O2 -pipe diffeq.f >gfortran -c -O2 -pipe diffuse.f >gfortran -c -O2 -pipe distgeom.f >gfortran -c -O2 -pipe document.f >gfortran -c -O2 -pipe dynamic.f >gfortran -c -O2 -pipe eangang.f >gfortran -c -O2 -pipe eangang1.f >gfortran -c -O2 -pipe eangang2.f >gfortran -c -O2 -pipe eangang3.f >gfortran -c -O2 -pipe eangle.f >gfortran -c -O2 -pipe eangle1.f >gfortran -c -O2 -pipe eangle2.f >gfortran -c -O2 -pipe eangle3.f >gfortran -c -O2 -pipe ebond.f >gfortran -c -O2 -pipe ebond1.f >gfortran -c -O2 -pipe ebond2.f >gfortran -c -O2 -pipe ebond3.f >gfortran -c -O2 -pipe ebuck.f >gfortran -c -O2 -pipe ebuck1.f >gfortran -c -O2 -pipe ebuck2.f >gfortran -c -O2 -pipe ebuck3.f >gfortran -c -O2 -pipe echarge.f >gfortran -c -O2 -pipe echarge1.f >gfortran -c -O2 -pipe echarge2.f >gfortran -c -O2 -pipe echarge3.f >gfortran -c -O2 -pipe echgdpl.f >gfortran -c -O2 -pipe echgdpl1.f >gfortran -c -O2 -pipe echgdpl2.f >gfortran -c -O2 -pipe echgdpl3.f >gfortran -c -O2 -pipe edipole.f >gfortran -c -O2 -pipe edipole1.f >gfortran -c -O2 -pipe edipole2.f >gfortran -c -O2 -pipe edipole3.f >gfortran -c -O2 -pipe egauss.f >gfortran -c -O2 -pipe egauss1.f >gfortran -c -O2 -pipe egauss2.f >gfortran -c -O2 -pipe egauss3.f >gfortran -c -O2 -pipe egeom.f >gfortran -c -O2 -pipe egeom1.f >gfortran -c -O2 -pipe egeom2.f >gfortran -c -O2 -pipe egeom3.f >gfortran -c -O2 -pipe ehal.f >gfortran -c -O2 -pipe ehal1.f >gfortran -c -O2 -pipe ehal2.f >gfortran -c -O2 -pipe ehal3.f >gfortran -c -O2 -pipe eimprop.f >gfortran -c -O2 -pipe eimprop1.f >gfortran -c -O2 -pipe eimprop2.f >gfortran -c -O2 -pipe eimprop3.f >gfortran -c -O2 -pipe eimptor.f >gfortran -c -O2 -pipe eimptor1.f >gfortran -c -O2 -pipe eimptor2.f >gfortran -c -O2 -pipe eimptor3.f >gfortran -c -O2 -pipe elj.f >gfortran -c -O2 -pipe elj1.f >gfortran -c -O2 -pipe elj2.f >gfortran -c -O2 -pipe elj3.f >gfortran -c -O2 -pipe embed.f >gfortran -c -O2 -pipe emetal.f >gfortran -c -O2 -pipe emetal1.f >gfortran -c -O2 -pipe emetal2.f >gfortran -c -O2 -pipe emetal3.f >gfortran -c -O2 -pipe emm3hb.f >gfortran -c -O2 -pipe emm3hb1.f >gfortran -c -O2 -pipe emm3hb2.f >gfortran -c -O2 -pipe emm3hb3.f >gfortran -c -O2 -pipe empole.f >gfortran -c -O2 -pipe empole1.f >gfortran -c -O2 -pipe empole2.f >gfortran -c -O2 -pipe empole3.f >gfortran -c -O2 -pipe energy.f >gfortran -c -O2 -pipe eopbend.f >gfortran -c -O2 -pipe eopbend1.f >gfortran -c -O2 -pipe eopbend2.f >gfortran -c -O2 -pipe eopbend3.f >gfortran -c -O2 -pipe eopdist.f >gfortran -c -O2 -pipe eopdist1.f >gfortran -c -O2 -pipe eopdist2.f >gfortran -c -O2 -pipe eopdist3.f >gfortran -c -O2 -pipe epitors.f >gfortran -c -O2 -pipe epitors1.f >gfortran -c -O2 -pipe epitors2.f >gfortran -c -O2 -pipe epitors3.f >gfortran -c -O2 -pipe erf.f >gfortran -c -O2 -pipe erxnfld.f >gfortran -c -O2 -pipe erxnfld1.f >gfortran -c -O2 -pipe erxnfld2.f >gfortran -c -O2 -pipe erxnfld3.f >gfortran -c -O2 -pipe esolv.f >gfortran -c -O2 -pipe esolv1.f >gfortran -c -O2 -pipe esolv2.f >gfortran -c -O2 -pipe esolv3.f >gfortran -c -O2 -pipe estrbnd.f >gfortran -c -O2 -pipe estrbnd1.f >gfortran -c -O2 -pipe estrbnd2.f >gfortran -c -O2 -pipe estrbnd3.f >gfortran -c -O2 -pipe estrtor.f >gfortran -c -O2 -pipe estrtor1.f >gfortran -c -O2 -pipe estrtor2.f >gfortran -c -O2 -pipe estrtor3.f >gfortran -c -O2 -pipe etors.f >gfortran -c -O2 -pipe etors1.f >gfortran -c -O2 -pipe etors2.f >gfortran -c -O2 -pipe etors3.f >gfortran -c -O2 -pipe etortor.f >gfortran -c -O2 -pipe etortor1.f >gfortran -c -O2 -pipe etortor2.f >gfortran -c -O2 -pipe etortor3.f >gfortran -c -O2 -pipe eurey.f >gfortran -c -O2 -pipe eurey1.f >gfortran -c -O2 -pipe eurey2.f >gfortran -c -O2 -pipe eurey3.f >gfortran -c -O2 -pipe evcorr.f >gfortran -c -O2 -pipe extra.f >gfortran -c -O2 -pipe extra1.f >gfortran -c -O2 -pipe extra2.f >gfortran -c -O2 -pipe extra3.f >gfortran -c -O2 -pipe fatal.f >gfortran -c -O2 -pipe fft3d.f >gfortran -c -O2 -pipe fftpack.f >gfortran -c -O2 -pipe field.f >gfortran -c -O2 -pipe final.f >gfortran -c -O2 -pipe flatten.f >gfortran -c -O2 -pipe freeunit.f >gfortran -c -O2 -pipe gda.f >gfortran -c -O2 -pipe geometry.f >gfortran -c -O2 -pipe getime.f >gfortran -c -O2 -pipe getint.f >gfortran -c -O2 -pipe getkey.f >gfortran -c -O2 -pipe getmol2.f >gfortran -c -O2 -pipe getnumb.f >gfortran -c -O2 -pipe getpdb.f >gfortran -c -O2 -pipe getprm.f >gfortran -c -O2 -pipe getref.f >gfortran -c -O2 -pipe getstring.f >gfortran -c -O2 -pipe gettext.f >gfortran -c -O2 -pipe getword.f >gfortran -c -O2 -pipe getxyz.f >gfortran -c -O2 -pipe gradient.f >gfortran -c -O2 -pipe gradrgd.f >gfortran -c -O2 -pipe gradrot.f >gfortran -c -O2 -pipe groups.f >gfortran -c -O2 -pipe grpline.f >gfortran -c -O2 -pipe gyrate.f >gfortran -c -O2 -pipe hessian.f >gfortran -c -O2 -pipe hessrgd.f >gfortran -c -O2 -pipe hessrot.f >gfortran -c -O2 -pipe hybrid.f >gfortran -c -O2 -pipe image.f >gfortran -c -O2 -pipe impose.f >gfortran -c -O2 -pipe induce.f >gfortran -c -O2 -pipe inertia.f >gfortran -c -O2 -pipe initial.f >gfortran -c -O2 -pipe initprm.f >gfortran -c -O2 -pipe initres.f >gfortran -c -O2 -pipe initrot.f >gfortran -c -O2 -pipe insert.f >gfortran -c -O2 -pipe intedit.f >gfortran -c -O2 -pipe intxyz.f >gfortran -c -O2 -pipe invbeta.f >gfortran -c -O2 -pipe invert.f >gfortran -c -O2 -pipe jacobi.f >gfortran -c -O2 -pipe kangang.f >gfortran -c -O2 -pipe kangle.f >gfortran -c -O2 -pipe katom.f >gfortran -c -O2 -pipe kbond.f >gfortran -c -O2 -pipe kcharge.f >gfortran -c -O2 -pipe kdipole.f >gfortran -c -O2 -pipe kewald.f >gfortran -c -O2 -pipe kgeom.f >gfortran -c -O2 -pipe kimprop.f >gfortran -c -O2 -pipe kimptor.f >gfortran -c -O2 -pipe kinetic.f >gfortran -c -O2 -pipe kmetal.f >gfortran -c -O2 -pipe kmpole.f >gfortran -c -O2 -pipe kopbend.f >gfortran -c -O2 -pipe kopdist.f >gfortran -c -O2 -pipe korbit.f >gfortran -c -O2 -pipe kpitors.f >gfortran -c -O2 -pipe kpolar.f >gfortran -c -O2 -pipe ksolv.f >gfortran -c -O2 -pipe kstrbnd.f >gfortran -c -O2 -pipe kstrtor.f >gfortran -c -O2 -pipe ktors.f >gfortran -c -O2 -pipe ktortor.f >gfortran -c -O2 -pipe kurey.f >gfortran -c -O2 -pipe kvdw.f >gfortran -c -O2 -pipe lattice.f >gfortran -c -O2 -pipe lbfgs.f >gfortran -c -O2 -pipe lights.f >gfortran -c -O2 -pipe makeint.f >gfortran -c -O2 -pipe makepdb.f >gfortran -c -O2 -pipe makeref.f >gfortran -c -O2 -pipe makexyz.f >gfortran -c -O2 -pipe maxwell.f >gfortran -c -O2 -pipe mdinit.f >gfortran -c -O2 -pipe mdrest.f >gfortran -c -O2 -pipe mdsave.f >gfortran -c -O2 -pipe mdstat.f >gfortran -c -O2 -pipe mechanic.f >gfortran -c -O2 -pipe merge.f >gfortran -c -O2 -pipe minimize.f >gfortran -c -O2 -pipe minirot.f >gfortran -c -O2 -pipe minrigid.f >gfortran -c -O2 -pipe molecule.f >gfortran -c -O2 -pipe moments.f >gfortran -c -O2 -pipe monte.f >gfortran -c -O2 -pipe mutate.f >gfortran -c -O2 -pipe nblist.f >gfortran -c -O2 -pipe newton.f >gfortran -c -O2 -pipe newtrot.f >gfortran -c -O2 -pipe nextarg.f >gfortran -c -O2 -pipe nexttext.f >gfortran -c -O2 -pipe nspline.f >gfortran -c -O2 -pipe nucleic.f >gfortran -c -O2 -pipe number.f >gfortran -c -O2 -pipe numeral.f >gfortran -c -O2 -pipe numgrad.f >gfortran -c -O2 -pipe ocvm.f >gfortran -c -O2 -pipe openend.f >gfortran -c -O2 -pipe optimize.f >gfortran -c -O2 -pipe optirot.f >gfortran -c -O2 -pipe optrigid.f >gfortran -c -O2 -pipe optsave.f >gfortran -c -O2 -pipe orbital.f >gfortran -c -O2 -pipe orient.f >gfortran -c -O2 -pipe orthog.f >gfortran -c -O2 -pipe overlap.f >gfortran -c -O2 -pipe path.f >gfortran -c -O2 -pipe pdbxyz.f >gfortran -c -O2 -pipe piscf.f >gfortran -c -O2 -pipe pmepol.f >i686-pc-linux-gnu-gcc -c -O2 -pipe -I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/usr/include -O2 -pipe pmpb.c >gfortran -c -O2 -pipe polarize.f >gfortran -c -O2 -pipe poledit.f >gfortran -c -O2 -pipe polymer.f >gfortran -c -O2 -pipe potential.f >gfortran -c -O2 -pipe precise.f >gfortran -c -O2 -pipe pressure.f >gfortran -c -O2 -pipe prmedit.f >gfortran -c -O2 -pipe prmkey.f >gfortran -c -O2 -pipe promo.f >gfortran -c -O2 -pipe protein.f >gfortran -c -O2 -pipe prtdyn.f >gfortran -c -O2 -pipe prterr.f >gfortran -c -O2 -pipe prtint.f >gfortran -c -O2 -pipe prtmol2.f >gfortran -c -O2 -pipe prtpdb.f >gfortran -c -O2 -pipe prtprm.f >gfortran -c -O2 -pipe prtseq.f >gfortran -c -O2 -pipe prtxyz.f >gfortran -c -O2 -pipe pss.f >gfortran -c -O2 -pipe pssrigid.f >gfortran -c -O2 -pipe pssrot.f >gfortran -c -O2 -pipe quatfit.f >gfortran -c -O2 -pipe radial.f >gfortran -c -O2 -pipe random.f >gfortran -c -O2 -pipe rattle.f >gfortran -c -O2 -pipe readdyn.f >gfortran -c -O2 -pipe readgau.f >gfortran -c -O2 -pipe readint.f >gfortran -c -O2 -pipe readmol2.f >gfortran -c -O2 -pipe readpdb.f >gfortran -c -O2 -pipe readprm.f >gfortran -c -O2 -pipe readseq.f >gfortran -c -O2 -pipe readxyz.f >gfortran -c -O2 -pipe replica.f >gfortran -c -O2 -pipe rgdstep.f >gfortran -c -O2 -pipe rings.f >gfortran -c -O2 -pipe rmsfit.f >gfortran -c -O2 -pipe rotlist.f >gfortran -c -O2 -pipe rotpole.f >gfortran -c -O2 -pipe saddle.f >gfortran -c -O2 -pipe scan.f >gfortran -c -O2 -pipe sdstep.f >gfortran -c -O2 -pipe search.f >i686-pc-linux-gnu-gcc -c -O2 -pipe -I/etc/java-config-2/current-system-vm/include -I/etc/java-config-2/current-system-vm/include/linux -I/usr/include -O2 -pipe server.c >gfortran -c -O2 -pipe setime.f >gfortran -c -O2 -pipe shakeup.f >gfortran -c -O2 -pipe sigmoid.f >gfortran -c -O2 -pipe sktstuff.f >gfortran -c -O2 -pipe sniffer.f >gfortran -c -O2 -pipe sort.f >gfortran -c -O2 -pipe spacefill.f >gfortran -c -O2 -pipe spectrum.f >gfortran -c -O2 -pipe square.f >gfortran -c -O2 -pipe suffix.f >gfortran -c -O2 -pipe superpose.f >gfortran -c -O2 -pipe surface.f >gfortran -c -O2 -pipe surfatom.f >gfortran -c -O2 -pipe switch.f >gfortran -c -O2 -pipe sybylxyz.f >gfortran -c -O2 -pipe temper.f >gfortran -c -O2 -pipe testgrad.f >gfortran -c -O2 -pipe testhess.f >gfortran -c -O2 -pipe testpair.f >gfortran -c -O2 -pipe testrot.f >gfortran -c -O2 -pipe timer.f >gfortran -c -O2 -pipe timerot.f >gfortran -c -O2 -pipe tncg.f >gfortran -c -O2 -pipe torphase.f >gfortran -c -O2 -pipe torque.f >gfortran -c -O2 -pipe torsions.f >gfortran -c -O2 -pipe trimtext.f >gfortran -c -O2 -pipe unitcell.f >gfortran -c -O2 -pipe valence.f >gfortran -c -O2 -pipe verlet.f >gfortran -c -O2 -pipe version.f >gfortran -c -O2 -pipe vibbig.f >gfortran -c -O2 -pipe vibrate.f >gfortran -c -O2 -pipe vibrot.f >gfortran -c -O2 -pipe volume.f >gfortran -c -O2 -pipe xtalfit.f >gfortran -c -O2 -pipe xtalmin.f >gfortran -c -O2 -pipe xyzatm.f >gfortran -c -O2 -pipe xyzedit.f >gfortran -c -O2 -pipe xyzint.f >gfortran -c -O2 -pipe xyzpdb.f >gfortran -c -O2 -pipe xyzsybyl.f >gfortran -c -O2 -pipe zatom.f >ar -crusv libtinker.a \ > active.o \ > analysis.o \ > angles.o \ > attach.o \ > basefile.o \ > beeman.o \ > bicubic.o \ > bitors.o \ > bonds.o \ > born.o \ > bounds.o \ > bspline.o \ > calendar.o \ > center.o \ > chkpole.o \ > chkring.o \ > chkxyz.o \ > cholesky.o \ > clock.o \ > cluster.o \ > column.o \ > command.o \ > connect.o \ > connolly.o \ > control.o \ > cspline.o \ > cutoffs.o \ > deflate.o \ > delete.o \ > diagq.o \ > diffeq.o \ > eangang.o \ > eangang1.o \ > eangang2.o \ > eangang3.o \ > eangle.o \ > eangle1.o \ > eangle2.o \ > eangle3.o \ > ebond.o \ > ebond1.o \ > ebond2.o \ > ebond3.o \ > ebuck.o \ > ebuck1.o \ > ebuck2.o \ > ebuck3.o \ > echarge.o \ > echarge1.o \ > echarge2.o \ > echarge3.o \ > echgdpl.o \ > echgdpl1.o \ > echgdpl2.o \ > echgdpl3.o \ > edipole.o \ > edipole1.o \ > edipole2.o \ > edipole3.o \ > egauss.o \ > egauss1.o \ > egauss2.o \ > egauss3.o \ > egeom.o \ > egeom1.o \ > egeom2.o \ > egeom3.o \ > ehal.o \ > ehal1.o \ > ehal2.o \ > ehal3.o \ > eimprop.o \ > eimprop1.o \ > eimprop2.o \ > eimprop3.o \ > eimptor.o \ > eimptor1.o \ > eimptor2.o \ > eimptor3.o \ > elj.o \ > elj1.o \ > elj2.o \ > elj3.o \ > embed.o \ > emetal.o \ > emetal1.o \ > emetal2.o \ > emetal3.o \ > emm3hb.o \ > emm3hb1.o \ > emm3hb2.o \ > emm3hb3.o \ > empole.o \ > empole1.o \ > empole2.o \ > empole3.o \ > energy.o \ > eopbend.o \ > eopbend1.o \ > eopbend2.o \ > eopbend3.o \ > eopdist.o \ > eopdist1.o \ > eopdist2.o \ > eopdist3.o \ > epitors.o \ > epitors1.o \ > epitors2.o \ > epitors3.o \ > erf.o \ > erxnfld.o \ > erxnfld1.o \ > erxnfld2.o \ > erxnfld3.o \ > esolv.o \ > esolv1.o \ > esolv2.o \ > esolv3.o \ > estrbnd.o \ > estrbnd1.o \ > estrbnd2.o \ > estrbnd3.o \ > estrtor.o \ > estrtor1.o \ > estrtor2.o \ > estrtor3.o \ > etors.o \ > etors1.o \ > etors2.o \ > etors3.o \ > etortor.o \ > etortor1.o \ > etortor2.o \ > etortor3.o \ > eurey.o \ > eurey1.o \ > eurey2.o \ > eurey3.o \ > evcorr.o \ > extra.o \ > extra1.o \ > extra2.o \ > extra3.o \ > fatal.o \ > fft3d.o \ > fftpack.o \ > field.o \ > final.o \ > flatten.o \ > freeunit.o \ > geometry.o \ > getime.o \ > getint.o \ > getkey.o \ > getmol2.o \ > getnumb.o \ > getpdb.o \ > getprm.o \ > getref.o \ > getstring.o \ > gettext.o \ > getword.o \ > getxyz.o \ > gradient.o \ > gradrgd.o \ > gradrot.o \ > groups.o \ > grpline.o \ > gyrate.o \ > hessian.o \ > hessrgd.o \ > hessrot.o \ > hybrid.o \ > image.o \ > impose.o \ > induce.o \ > inertia.o \ > initial.o \ > initprm.o \ > initres.o \ > initrot.o \ > insert.o \ > invbeta.o \ > invert.o \ > jacobi.o \ > kangang.o \ > kangle.o \ > katom.o \ > kbond.o \ > kcharge.o \ > kdipole.o \ > kewald.o \ > kgeom.o \ > kimprop.o \ > kimptor.o \ > kinetic.o \ > kmetal.o \ > kmpole.o \ > kopbend.o \ > kopdist.o \ > korbit.o \ > kpitors.o \ > kpolar.o \ > ksolv.o \ > kstrbnd.o \ > kstrtor.o \ > ktors.o \ > ktortor.o \ > kurey.o \ > kvdw.o \ > lattice.o \ > lbfgs.o \ > lights.o \ > makeint.o \ > makepdb.o \ > makeref.o \ > makexyz.o \ > maxwell.o \ > mdinit.o \ > mdrest.o \ > mdsave.o \ > mdstat.o \ > mechanic.o \ > merge.o \ > molecule.o \ > moments.o \ > mutate.o \ > nblist.o \ > nextarg.o \ > nexttext.o \ > nspline.o \ > number.o \ > numeral.o \ > numgrad.o \ > ocvm.o \ > openend.o \ > optsave.o \ > orbital.o \ > orient.o \ > orthog.o \ > overlap.o \ > piscf.o \ > pmepol.o \ > pmpb.o \ > polymer.o \ > precise.o \ > pressure.o \ > prmkey.o \ > promo.o \ > prtdyn.o \ > prterr.o \ > prtint.o \ > prtmol2.o \ > prtpdb.o \ > prtprm.o \ > prtseq.o \ > prtxyz.o \ > quatfit.o \ > random.o \ > rattle.o \ > readdyn.o \ > readgau.o \ > readint.o \ > readmol2.o \ > readpdb.o \ > readprm.o \ > readseq.o \ > readxyz.o \ > replica.o \ > rgdstep.o \ > rings.o \ > rmsfit.o \ > rotlist.o \ > rotpole.o \ > sdstep.o \ > search.o \ > server.o \ > setime.o \ > shakeup.o \ > sigmoid.o \ > sktstuff.o \ > sort.o \ > square.o \ > suffix.o \ > surface.o \ > surfatom.o \ > switch.o \ > temper.o \ > testrot.o \ > tncg.o \ > torphase.o \ > torque.o \ > torsions.o \ > trimtext.o \ > unitcell.o \ > verlet.o \ > version.o \ > volume.o \ > xyzatm.o \ > zatom.o >a - active.o >a - analysis.o >a - angles.o >a - attach.o >a - basefile.o >a - beeman.o >a - bicubic.o >a - bitors.o >a - bonds.o >a - born.o >a - bounds.o >a - bspline.o >a - calendar.o >a - center.o >a - chkpole.o >a - chkring.o >a - chkxyz.o >a - cholesky.o >a - clock.o >a - cluster.o >a - column.o >a - command.o >a - connect.o >a - connolly.o >a - control.o >a - cspline.o >a - cutoffs.o >a - deflate.o >a - delete.o >a - diagq.o >a - diffeq.o >a - eangang.o >a - eangang1.o >a - eangang2.o >a - eangang3.o >a - eangle.o >a - eangle1.o >a - eangle2.o >a - eangle3.o >a - ebond.o >a - ebond1.o >a - ebond2.o >a - ebond3.o >a - ebuck.o >a - ebuck1.o >a - ebuck2.o >a - ebuck3.o >a - echarge.o >a - echarge1.o >a - echarge2.o >a - echarge3.o >a - echgdpl.o >a - echgdpl1.o >a - echgdpl2.o >a - echgdpl3.o >a - edipole.o >a - edipole1.o >a - edipole2.o >a - edipole3.o >a - egauss.o >a - egauss1.o >a - egauss2.o >a - egauss3.o >a - egeom.o >a - egeom1.o >a - egeom2.o >a - egeom3.o >a - ehal.o >a - ehal1.o >a - ehal2.o >a - ehal3.o >a - eimprop.o >a - eimprop1.o >a - eimprop2.o >a - eimprop3.o >a - eimptor.o >a - eimptor1.o >a - eimptor2.o >a - eimptor3.o >a - elj.o >a - elj1.o >a - elj2.o >a - elj3.o >a - embed.o >a - emetal.o >a - emetal1.o >a - emetal2.o >a - emetal3.o >a - emm3hb.o >a - emm3hb1.o >a - emm3hb2.o >a - emm3hb3.o >a - empole.o >a - empole1.o >a - empole2.o >a - empole3.o >a - energy.o >a - eopbend.o >a - eopbend1.o >a - eopbend2.o >a - eopbend3.o >a - eopdist.o >a - eopdist1.o >a - eopdist2.o >a - eopdist3.o >a - epitors.o >a - epitors1.o >a - epitors2.o >a - epitors3.o >a - erf.o >a - erxnfld.o >a - erxnfld1.o >a - erxnfld2.o >a - erxnfld3.o >a - esolv.o >a - esolv1.o >a - esolv2.o >a - esolv3.o >a - estrbnd.o >a - estrbnd1.o >a - estrbnd2.o >a - estrbnd3.o >a - estrtor.o >a - estrtor1.o >a - estrtor2.o >a - estrtor3.o >a - etors.o >a - etors1.o >a - etors2.o >a - etors3.o >a - etortor.o >a - etortor1.o >a - etortor2.o >a - etortor3.o >a - eurey.o >a - eurey1.o >a - eurey2.o >a - eurey3.o >a - evcorr.o >a - extra.o >a - extra1.o >a - extra2.o >a - extra3.o >a - fatal.o >a - fft3d.o >a - fftpack.o >a - field.o >a - final.o >a - flatten.o >a - freeunit.o >a - geometry.o >a - getime.o >a - getint.o >a - getkey.o >a - getmol2.o >a - getnumb.o >a - getpdb.o >a - getprm.o >a - getref.o >a - getstring.o >a - gettext.o >a - getword.o >a - getxyz.o >a - gradient.o >a - gradrgd.o >a - gradrot.o >a - groups.o >a - grpline.o >a - gyrate.o >a - hessian.o >a - hessrgd.o >a - hessrot.o >a - hybrid.o >a - image.o >a - impose.o >a - induce.o >a - inertia.o >a - initial.o >a - initprm.o >a - initres.o >a - initrot.o >a - insert.o >a - invbeta.o >a - invert.o >a - jacobi.o >a - kangang.o >a - kangle.o >a - katom.o >a - kbond.o >a - kcharge.o >a - kdipole.o >a - kewald.o >a - kgeom.o >a - kimprop.o >a - kimptor.o >a - kinetic.o >a - kmetal.o >a - kmpole.o >a - kopbend.o >a - kopdist.o >a - korbit.o >a - kpitors.o >a - kpolar.o >a - ksolv.o >a - kstrbnd.o >a - kstrtor.o >a - ktors.o >a - ktortor.o >a - kurey.o >a - kvdw.o >a - lattice.o >a - lbfgs.o >a - lights.o >a - makeint.o >a - makepdb.o >a - makeref.o >a - makexyz.o >a - maxwell.o >a - mdinit.o >a - mdrest.o >a - mdsave.o >a - mdstat.o >a - mechanic.o >a - merge.o >a - molecule.o >a - moments.o >a - mutate.o >a - nblist.o >a - nextarg.o >a - nexttext.o >a - nspline.o >a - number.o >a - numeral.o >a - numgrad.o >a - ocvm.o >a - openend.o >a - optsave.o >a - orbital.o >a - orient.o >a - orthog.o >a - overlap.o >a - piscf.o >a - pmepol.o >a - pmpb.o >a - polymer.o >a - precise.o >a - pressure.o >a - prmkey.o >a - promo.o >a - prtdyn.o >a - prterr.o >a - prtint.o >a - prtmol2.o >a - prtpdb.o >a - prtprm.o >a - prtseq.o >a - prtxyz.o >a - quatfit.o >a - random.o >a - rattle.o >a - readdyn.o >a - readgau.o >a - readint.o >a - readmol2.o >a - readpdb.o >a - readprm.o >a - readseq.o >a - readxyz.o >a - replica.o >a - rgdstep.o >a - rings.o >a - rmsfit.o >a - rotlist.o >a - rotpole.o >a - sdstep.o >a - search.o >a - server.o >a - setime.o >a - shakeup.o >a - sigmoid.o >a - sktstuff.o >a - sort.o >a - square.o >a - suffix.o >a - surface.o >a - surfatom.o >a - switch.o >a - temper.o >a - testrot.o >a - tncg.o >a - torphase.o >a - torque.o >a - torsions.o >a - trimtext.o >a - unitcell.o >a - verlet.o >a - version.o >a - volume.o >a - xyzatm.o >a - zatom.o >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o alchemy.x alchemy.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o analyze.x analyze.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o anneal.x anneal.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o archive.x archive.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o correlate.x correlate.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o crystal.x crystal.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o diffuse.x diffuse.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o distgeom.x distgeom.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o document.x document.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o dynamic.x dynamic.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o gda.x gda.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o intedit.x intedit.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o intxyz.x intxyz.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >gfortran -Wl,-O1 -Wl,-rpath /opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -o minimize.x minimize.o libtinker.a -lmaloc -L/opt/icedtea6-bin-1.8.0/jre/lib/i386/server/ -ljvm >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >make: *** [intxyz.x] Error 1 >make: *** Waiting for unfinished jobs.... >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined libtinker.areference (topmpb.o )`:initMG 'In > pmpb.cfunction: (`.apbsinitial_text'+:0x26f0 >)pmpb.c:: (undefined. textreference+ 0xcabto) :` Vpmg_qfDirectPolForceundefined' >referencepmpb.c :to( .`textstartVio+'0x2775 >)pmpb.c:: (undefined. textreference+ 0xd1ato) :` Vpmg_qfNLDirectPolForceundefined' >referencepmpb.c :to( .`textNOsh_ctor+'0x2863 >)pmpb.c:: (undefined. textreference+ 0xd8cto) :` Vpmg_dbDirectPolForceundefined' >referencepmpb.c :to( .`textNOsh_parseInput+'0x28bc >)libtinker.a:( pmpb.oundefined): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to ` Vgrid_dtorreference' >topmpb.c :`(Vpmg_dbNLDirectPolForce.'text >+pmpb.c0xfa3:)(:. textundefined+ 0x2973reference) :to undefined` Vgrid_dtorreference' >topmpb.c :`(Vpmg_ibDirectPolForce.'text >+pmpb.c0xfbd:)(:. textundefined+ 0x29ccreference) :to undefined` Vgrid_dtorreference' >topmpb.c :`(Vpmg_ibNLDirectPolForce.'text >+pmpb.c0xfdf:)(:. textundefined+ 0x2acbreference) :to undefined` Valist_dtorreference' >topmpb.c :`(killMG.'text >+libtinker.a0x1035()pmpb.o:) :undefined Inreference functionto ``Vatom_setPosition'pbmutualpolforce_ >'pmpb.c:: >(pmpb.c.:text(+.0x106atext)+:0x2bfa )undefined: undefinedreference referenceto to` Vatom_setDipole`'Vatom_setInducedDipole >'pmpb.c >:pmpb.c(:.(text.+text0x10d0+)0x2c11:) :undefined undefinedreference referenceto to` Vatom_setQuadrupole`'Vatom_setNLInducedDipole >'pmpb.c >:pmpb.c(:.(text.+text0x1151+)0x2cf1:) :undefined undefinedreference referenceto to` Valist_getStatistics`'initMG >'pmpb.c >:pmpb.c(:.(text.+text0x1178+)0x2d5f:) :undefined undefinedreference referenceto to` MGparm_check`'Vpmg_qfMutualPolForce >'pmpb.c >:pmpb.c(:.(text+.0x1188text)+:0x2e2f )undefined: referenceundefined toreference `toPBEparm_check '` >Vpmg_dbMutualPolForcepmpb.c': >(pmpb.c.:text(+.0x1206text)+:0x2ee7 )undefined: referenceundefined toreference `toinitMG '` >Vpmg_ibMutualPolForcepmpb.c': >(pmpb.c.:text(+.0x122ctext)+:0x2f93 )undefined: referenceundefined toreference `tosolveMG '` >killMGpmpb.c': >(libtinker.a.(textpmpb.o+)0x1251:) :In undefinedfunction reference` apbsfinal_to' :` >setPartMGpmpb.c': >(pmpb.c.:text(+.0x304ctext)+:0x1334 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vpmg_fillArraypmpb.c': >(pmpb.c.:text(+.0x3058text)+:0x13d6 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vgrid_ctorpmpb.c': >(pmpb.c.:text(+.0x3064text)+:0x1431 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vpmg_qfPermanentMultipoleEnergypmpb.c': >(pmpb.c.:text(+.0x3070text)+:0x1462 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vpmg_fieldSpline4pmpb.c': >(pmpb.c.:text(+.0x307ctext)+:0x1517 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vpmg_qfPermanentMultipoleForcelibtinker.a'( >pmpb.opmpb.c)::(pmpb.c.:text(+.0x1607text)+:0x3088 )undefined: referencemore toundefined `referencesVpmg_dbPermanentMultipoleForce 'to > pmpb.c`:Vgrid_dtor('. textfollow+ >0x16a7libtinker.a)(:pmpb.o )undefined: referenceIn tofunction ``Vpmg_ibPermanentMultipoleForceapbsfinal_'' >:pmpb.c >:pmpb.c(:.(text.+text0x17f0+)0x3094:) :undefined undefinedreference referenceto to` killMG`'Valist_dtor >'pmpb.c >:pmpb.c(:.(text.+text0x1830+)0x30a0:) :undefined undefinedreference referenceto to` NOsh_setupElecCalc`'NOsh_dtor >'pmpb.c >:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd):collect2: undefined reference to `Vatom_setInducedDipole' >pmpb.c:(ld returned 1 exit status.text >+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >make: *** [anneal.x] Error 1 >make: *** [document.x] Error 1 >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >make: *** [alchemy.x] Error 1 >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >make: *** [diffuse.x] Error 1 >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined make: *** [intedit.x] Error 1 >reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >libtinker.apmpb.c:((.pmpb.otext)+:0x2243 )In: functionundefined `referenceapbsinitial_ 'to: >`pmpb.ckillMG:'( >.pmpb.ctext:+(0xcab.)text:+ 0x2324undefined) :reference undefinedto reference` startVioto' >`pmpb.cVpmg_fillArray:'( >.pmpb.ctext:+(0xd1a.)text:+ 0x23c0undefined) :reference undefinedto reference` NOsh_ctorto' >`pmpb.cVgrid_ctor:'( >.libtinker.atext(+pmpb.o0xd8c)):: Inundefined functionreference `topbdirectpolforce_ '`:NOsh_parseInput >'pmpb.c >:libtinker.a((.pmpb.otext)+:0x2514 )In: functionundefined `referenceapbsempole_ 'to: >`pmpb.cVatom_setInducedDipole:'( >.pmpb.ctext:+(0xf89.)text:+ 0x252bundefined) :reference undefinedto reference` Vgrid_dtorto' >`pmpb.cVatom_setNLInducedDipole:'( >.pmpb.ctext:+(0xfa3.)text:+ 0x2644undefined) :reference undefinedto reference` Vgrid_dtorto' >`pmpb.cinitMG:'( >.pmpb.ctext:+(0xfbd.)text:+ 0x26f0undefined) :reference undefinedto reference` Vgrid_dtorto' >`pmpb.cVpmg_qfDirectPolForce:'( >.pmpb.ctext:+(0xfdf.)text:+ 0x2775undefined) : undefined referencereference toto ``Valist_dtorVpmg_qfNLDirectPolForce'' > >pmpb.cpmpb.c::((..texttext++0x10350x2863)):: undefinedundefined referencereference toto ``Vatom_setPositionVpmg_dbDirectPolForce'' > >pmpb.cpmpb.c::((..texttext++0x106a0x28bc)):: undefinedundefined referencereference toto ``Vatom_setDipoleVpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): make: undefined reference to*** [dynamic.x] Error 1 >`setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference tomake: `*** [distgeom.x] Error 1Vpmg_fillArray >' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined referencelibtinker.a to( pmpb.o`)Vgrid_dtor:' >Inlibtinker.a (functionpmpb.o )`:apbsinitial_pmpb.c'::( >.pmpb.ctext:+(0x3088.)text:+ 0xcabmore) :undefined undefinedreferences referenceto to` Vgrid_dtor`'startVio 'follow > >pmpb.clibtinker.a:((pmpb.o.)text:+ 0xd1aIn) :function undefined` apbsfinal_reference' :to > pmpb.c`:NOsh_ctor('. >textpmpb.c+:0x3094().:text +undefined0xd8c )reference: toundefined `referenceValist_dtor 'to > pmpb.c`:NOsh_parseInput('. >textlibtinker.a+(0x30a0pmpb.o)):: undefinedIn referencefunction to` apbsempole_`'NOsh_dtor:' > >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference collect2: to `Vgrid_dtor' >pmpb.c:ld returned 1 exit status( >.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151):libtinker.a undefined (referencepmpb.o )to: `InValist_getStatistics 'function > pmpb.c`:apbsinitial_('.:text >+pmpb.c0x1178:)(:. textundefined+ 0xcabreference) :to undefined` MGparm_checkreference' >topmpb.c :`(startVio.'text >+pmpb.c0x1188:)(:. textundefined+ 0xd1areference): undefined toreference `toPBEparm_check '` >NOsh_ctorpmpb.c': >(pmpb.c.:text(+.0x1206text)+:0xd8c )undefined: referenceundefined toreference `toinitMG '` >NOsh_parseInputpmpb.c': >(libtinker.a.(textpmpb.o+)0x122c:) :In undefinedfunction reference` apbsempole_to' :` >solveMGpmpb.c': >(pmpb.c.:text(+.0xf89text)+:0x1251 )undefined: referenceundefined toreference `toVgrid_dtor '` >setPartMGpmpb.c': >(pmpb.c.:text(+.0xfa3text)+:0x1334 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vpmg_fillArraypmpb.c': >(pmpb.c.:text(+.0xfbdtext)+:0x13d6 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vgrid_ctorpmpb.c': >(pmpb.c.:text(+.0xfdftext)+:0x1431 )undefined: referenceundefined toreference `toValist_dtor '` >Vpmg_qfPermanentMultipoleEnergypmpb.c': >(pmpb.c.:text(+.0x1035text)+:0x1462 )undefined: referenceundefined toreference `toVatom_setPosition '` >Vpmg_fieldSpline4pmpb.c': >(pmpb.c.:text(+.0x106atext)+:0x1517 )undefined: referenceundefined toreference `toVatom_setDipole '` >Vpmg_qfPermanentMultipoleForcepmpb.c': >(pmpb.c.:text(+.0x10d0text)+:0x1607 )undefined: referenceundefined toreference `toVatom_setQuadrupole '` >Vpmg_dbPermanentMultipoleForcepmpb.c': >(pmpb.c.:text(+.0x1151text)+:0x16a7 )undefined: make: reference *** [analyze.x] Error 1undefined >to reference` Valist_getStatisticsto' >`pmpb.cVpmg_ibPermanentMultipoleForce:'( >.pmpb.ctext:+(0x1178.)text:+ 0x17f0undefined) :reference undefinedto reference` MGparm_checkto' >`pmpb.ckillMG:'( >.pmpb.ctext:+(0x1188.)text:+ 0x1830undefined) :reference undefinedto reference` PBEparm_checkto' >`pmpb.cNOsh_setupElecCalc:'( >.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9):pmpb.c :undefined( .referencetext +to0x1848 )`:Vpmg_fieldSpline4 'undefined > pmpb.creference: (to. text`+Valist_ctor0x1c93') >:pmpb.c :undefined( .referencetext +to0x18f0 )`:killMG 'undefined > pmpb.creference: (to. `printPBEPARM'text >+pmpb.c0x1d75:)(:. textundefined+ 0x1918reference) :to undefined` Vpmg_fillArrayreference' >to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference pmpb.cto: (`.Vatom_setNLInducedDipoletext'+ >0x1e11pmpb.c)::( .undefinedtext +reference0x1fed )to: `undefinedVgrid_ctor 'reference > libtinker.ato( pmpb.o`)MGparm_check:' >Inpmpb.c :function( .`textapbsnlinduce_+'0x2003:) >:pmpb.c :undefined( .referencetext +to0x1f6d )`:PBEparm_check 'undefined > pmpb.creference: (to. text`+Vatom_setNLInducedDipole0x2081') >:pmpb.c :undefined( .referencetext +to0x1fed )`initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:: (undefined. textreference+ 0x20c4to) :` MGparm_checkundefined' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference make: to *** [crystal.x] Error 1` >Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >make: *** [correlate.x] Error 1 >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.libtinker.atext(+pmpb.o0x2243)):: Inundefined functionreference `toapbsinitial_ '`:killMG >'pmpb.c >:pmpb.c(:.(text.+text0xcab+)0x2324:) :undefined undefinedreference referenceto to` startVio`'Vpmg_fillArray >'pmpb.c >:pmpb.c(:.(text.+text0xd1a+)0x23c0:) :undefined undefinedreference referenceto to` NOsh_ctor`Vgrid_ctor'' > >libtinker.apmpb.c(:pmpb.o().:text +In0xd8c )function: `undefinedpbdirectpolforce_ 'reference: >topmpb.c :`(NOsh_parseInput.'text >+libtinker.a0x2514()pmpb.o:) :undefined Inreference functionto ``apbsempole_Vatom_setInducedDipole'': > >pmpb.cpmpb.c::((..texttext++0x252b0xf89)):: undefinedundefined referencereference toto ``Vatom_setNLInducedDipoleVgrid_dtor'' > >pmpb.cpmpb.c::((..texttext++0x26440xfa3)):: undefinedundefined referencereference toto ``initMGVgrid_dtor'' > >pmpb.cpmpb.c::((..texttext++0x26f00xfbd)):: undefinedundefined referencereference toto ``Vpmg_qfDirectPolForceVgrid_dtor'' > >pmpb.cpmpb.c::((..texttext++0x27750xfdf)):: undefinedundefined referencereference toto ``Vpmg_qfNLDirectPolForceValist_dtor'' > >pmpb.cpmpb.c::((..texttext++0x28630x1035)):: undefinedundefined referencereference toto ``Vpmg_dbDirectPolForceVatom_setPosition'' > >pmpb.cpmpb.c::((..texttext++0x28bc0x106a)):: undefinedundefined referencereference toto ``Vpmg_dbNLDirectPolForceVatom_setDipole'' > >pmpb.cpmpb.c::((..texttext++0x29730x10d0)):: undefinedundefined referencereference toto ``Vpmg_ibDirectPolForceVatom_setQuadrupole'' > >pmpb.cpmpb.c::((..texttext++0x29cc0x1151)):: undefinedundefined referencereference toto ``Vpmg_ibNLDirectPolForceValist_getStatistics'' > >pmpb.cpmpb.c::((..texttext++0x2acb0x1178)):: undefinedundefined referencereference toto ``killMGMGparm_check'' > >libtinker.apmpb.c(:pmpb.o().:text +In0x1188 )function `: pbmutualpolforce_undefined' :reference > pmpb.cto: (`.PBEparm_checktext'+ >0x2bfapmpb.c)::( .undefinedtext +reference0x1206 )to: `undefinedVatom_setInducedDipole 'reference > pmpb.cto: (`.initMGtext'+ >0x2c11pmpb.c)::( .undefinedtext +reference0x122c )to: `undefinedVatom_setNLInducedDipole 'reference > pmpb.cto: (`.solveMGtext'+ >0x2cf1pmpb.c)::( .undefinedtext +reference0x1251 )to: undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined` reference toinitMG '` >initMGpmpb.c': >(pmpb.c.:text(+.0x2d5ftext)+:0x20a3 )undefined: referenceundefined toreference `toVpmg_qfMutualPolForce '` >solveMGpmpb.c': >(pmpb.c.:text(+.0x2e2ftext)+:0x20c4 )undefined: referenceundefined toreference `toVpmg_dbMutualPolForce '` >setPartMGpmpb.c': >(pmpb.c.:text(+.0x2ee7text)+:0x2147 )undefined: referenceundefined toreference `toVpmg_ibMutualPolForce '` >Vpmg_fillArraypmpb.c': >(pmpb.c.:text(+.0x2f93text)+:0x2199 )undefined: referenceundefined toreference `tokillMG '` >Vpmg_fieldSpline4libtinker.a'( >pmpb.opmpb.c)::( .Intext +function0x2243 )`:apbsfinal_ 'undefined: >referencepmpb.c :to( .`textkillMG+'0x304c >)pmpb.c:: (undefined. textreference+ 0x2324to) :` Vgrid_dtorundefined' >referencepmpb.c :to( .`textVpmg_fillArray+'0x3058 >)pmpb.c:: (undefined. textreference+ 0x23c0to) :` Vgrid_dtorundefined' >referencepmpb.c :to( .`textVgrid_ctor+'0x3064 >)libtinker.a:( pmpb.oundefined) :reference Into function` Vgrid_dtor`'pbdirectpolforce_ >'pmpb.c:: >(pmpb.c.:text(+.0x3070text)+:0x2514 )undefined: referenceundefined toreference `toVgrid_dtor '` >Vatom_setInducedDipolepmpb.c': >(pmpb.c.:text(+.0x307ctext)+:0x252b )undefined: referenceundefined toreference `toVgrid_dtor '` >Vatom_setNLInducedDipolelibtinker.a'( >pmpb.opmpb.c)::(pmpb.c.:text(+.0x2644text)+:0x3088 )undefined: referencemore toundefined `referencesinitMG 'to > pmpb.c`:Vgrid_dtor('. textfollow+ >0x26f0libtinker.a)(:pmpb.o )undefined: referenceIn tofunction ``Vpmg_qfDirectPolForceapbsfinal_'' >:pmpb.c >:pmpb.c(:.(text.+text0x2775+)0x3094:) :undefined undefinedreference referenceto to` Vpmg_qfNLDirectPolForce`'Valist_dtor >'pmpb.c >:pmpb.c(:.(text.+text0x2863+)0x30a0:) :undefined undefinedreference referenceto `Vpmg_dbDirectPolForceto' >`pmpb.cNOsh_dtor:'( >.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference tocollect2: `Vpmg_ibNLDirectPolForce' >pmpb.c:(.ld returned 1 exit statustext >+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >make: *** [archive.x] Error 1 >make: *** [minimize.x] Error 1 >libtinker.a(pmpb.o): In function `apbsinitial_': >pmpb.c:(.text+0xcab): undefined reference to `startVio' >pmpb.c:(.text+0xd1a): undefined reference to `NOsh_ctor' >pmpb.c:(.text+0xd8c): undefined reference to `NOsh_parseInput' >libtinker.a(pmpb.o): In function `apbsempole_': >pmpb.c:(.text+0xf89): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfa3): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfbd): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0xfdf): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x1035): undefined reference to `Vatom_setPosition' >pmpb.c:(.text+0x106a): undefined reference to `Vatom_setDipole' >pmpb.c:(.text+0x10d0): undefined reference to `Vatom_setQuadrupole' >pmpb.c:(.text+0x1151): undefined reference to `Valist_getStatistics' >pmpb.c:(.text+0x1178): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1188): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1206): undefined reference to `initMG' >pmpb.c:(.text+0x122c): undefined reference to `solveMG' >pmpb.c:(.text+0x1251): undefined reference to `setPartMG' >pmpb.c:(.text+0x1334): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x13d6): undefined reference to `Vgrid_ctor' >pmpb.c:(.text+0x1431): undefined reference to `Vpmg_qfPermanentMultipoleEnergy' >pmpb.c:(.text+0x1462): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1517): undefined reference to `Vpmg_qfPermanentMultipoleForce' >pmpb.c:(.text+0x1607): undefined reference to `Vpmg_dbPermanentMultipoleForce' >pmpb.c:(.text+0x16a7): undefined reference to `Vpmg_ibPermanentMultipoleForce' >pmpb.c:(.text+0x17f0): undefined reference to `killMG' >pmpb.c:(.text+0x1830): undefined reference to `NOsh_setupElecCalc' >pmpb.c:(.text+0x1848): undefined reference to `Valist_ctor' >pmpb.c:(.text+0x18f0): undefined reference to `printPBEPARM' >pmpb.c:(.text+0x1918): undefined reference to `printMGPARM' >libtinker.a(pmpb.o): In function `apbsinduce_': >pmpb.c:(.text+0x19bd): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x1a3d): undefined reference to `MGparm_check' >pmpb.c:(.text+0x1a53): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x1ad1): undefined reference to `initMG' >pmpb.c:(.text+0x1af3): undefined reference to `solveMG' >pmpb.c:(.text+0x1b14): undefined reference to `setPartMG' >pmpb.c:(.text+0x1b97): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1be9): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x1c93): undefined reference to `killMG' >pmpb.c:(.text+0x1d75): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x1e11): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `apbsnlinduce_': >pmpb.c:(.text+0x1f6d): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x1fed): undefined reference to `MGparm_check' >pmpb.c:(.text+0x2003): undefined reference to `PBEparm_check' >pmpb.c:(.text+0x2081): undefined reference to `initMG' >pmpb.c:(.text+0x20a3): undefined reference to `solveMG' >pmpb.c:(.text+0x20c4): undefined reference to `setPartMG' >pmpb.c:(.text+0x2147): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x2199): undefined reference to `Vpmg_fieldSpline4' >pmpb.c:(.text+0x2243): undefined reference to `killMG' >pmpb.c:(.text+0x2324): undefined reference to `Vpmg_fillArray' >pmpb.c:(.text+0x23c0): undefined reference to `Vgrid_ctor' >libtinker.a(pmpb.o): In function `pbdirectpolforce_': >pmpb.c:(.text+0x2514): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x252b): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2644): undefined reference to `initMG' >pmpb.c:(.text+0x26f0): undefined reference to `Vpmg_qfDirectPolForce' >pmpb.c:(.text+0x2775): undefined reference to `Vpmg_qfNLDirectPolForce' >pmpb.c:(.text+0x2863): undefined reference to `Vpmg_dbDirectPolForce' >pmpb.c:(.text+0x28bc): undefined reference to `Vpmg_dbNLDirectPolForce' >pmpb.c:(.text+0x2973): undefined reference to `Vpmg_ibDirectPolForce' >pmpb.c:(.text+0x29cc): undefined reference to `Vpmg_ibNLDirectPolForce' >pmpb.c:(.text+0x2acb): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `pbmutualpolforce_': >pmpb.c:(.text+0x2bfa): undefined reference to `Vatom_setInducedDipole' >pmpb.c:(.text+0x2c11): undefined reference to `Vatom_setNLInducedDipole' >pmpb.c:(.text+0x2cf1): undefined reference to `initMG' >pmpb.c:(.text+0x2d5f): undefined reference to `Vpmg_qfMutualPolForce' >pmpb.c:(.text+0x2e2f): undefined reference to `Vpmg_dbMutualPolForce' >pmpb.c:(.text+0x2ee7): undefined reference to `Vpmg_ibMutualPolForce' >pmpb.c:(.text+0x2f93): undefined reference to `killMG' >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x304c): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3058): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3064): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x3070): undefined reference to `Vgrid_dtor' >pmpb.c:(.text+0x307c): undefined reference to `Vgrid_dtor' >libtinker.a(pmpb.o):pmpb.c:(.text+0x3088): more undefined references to `Vgrid_dtor' follow >libtinker.a(pmpb.o): In function `apbsfinal_': >pmpb.c:(.text+0x3094): undefined reference to `Valist_dtor' >pmpb.c:(.text+0x30a0): undefined reference to `NOsh_dtor' >collect2: ld returned 1 exit status >make: *** [gda.x] Error 1 > * ERROR: sci-chemistry/tinker-6.0 failed: > * (no error message) > * > * Call stack: > * ebuild.sh, line 54: Called src_compile > * environment, line 4950: Called die > * The specific snippet of code: > * emake -f ../make/Makefile F77="${FORTRANC}" CC="$(tc-getCC) -c" F77FLAGS=-c OPTFLAGS="${FFLAGS}" LINKFLAGS="${LDFLAGS} -Wl,-rpath ${javalib}" INCLUDEDIR="$(java-pkg_get-jni-cflags) -I${EPREFIX}/usr/include" LIBS="$(pkg-config --libs apbs) -lmaloc -L${javalib} -ljvm" || die; > * > * If you need support, post the output of 'emerge --info =sci-chemistry/tinker-6.0', > * the complete build log and the output of 'emerge -pqv =sci-chemistry/tinker-6.0'. >!!! When you file a bug report, please include the following information: >GENTOO_VM= CLASSPATH="" JAVA_HOME="/etc/java-config-2/current-system-vm" >JAVACFLAGS="" COMPILER="" >and of course, the output of emerge --info > * The complete build log is located at '/var/log/portage/build/sci-chemistry/tinker-6.0:20100621-154430.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/tinker-6.0/temp/environment'. > * S: '/var/tmp/portage/sci-chemistry/tinker-6.0/work/tinker/source'
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bug 324969
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