## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=i686-pc-linux-gnu ac_cv_build_alias=i686-pc-linux-gnu ac_cv_c_bigendian=no ac_cv_c_char_unsigned=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value=' -fpermissive' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value='-O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb' ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value=-Wl,-O1 ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_exeext= ac_cv_func_FCGX_Accept_r=no ac_cv_func__doprnt=no ac_cv_func_asprintf=yes ac_cv_func_atoll=yes ac_cv_func_basename=yes ac_cv_func_connect=yes ac_cv_func_erf=yes ac_cv_func_euidaccess=yes ac_cv_func_freehostent=no ac_cv_func_fseeko=yes ac_cv_func_getaddrinfo=yes ac_cv_func_gethostbyname=yes ac_cv_func_gethostent_r=yes ac_cv_func_getipnodebyaddr=no ac_cv_func_getipnodebyname=no ac_cv_func_getloadavg=yes ac_cv_func_getnameinfo=yes ac_cv_func_getpagesize=yes ac_cv_func_getpwuid=yes ac_cv_func_getrusage=yes ac_cv_func_gettimeofday=yes ac_cv_func_getuid=yes ac_cv_func_inet_ntoa_r=no ac_cv_func_inet_ntop=yes ac_cv_func_lchown=yes ac_cv_func_localtime_r=yes ac_cv_func_lutimes=yes ac_cv_func_nanosleep=yes ac_cv_func_pthread_atfork=yes ac_cv_func_pthread_setconcurrency=yes ac_cv_func_readpassphrase=no ac_cv_func_remove=yes ac_cv_func_select=yes ac_cv_func_shmat=yes ac_cv_func_statfs=yes ac_cv_func_statvfs=yes ac_cv_func_strcasecmp=yes ac_cv_func_strdup=yes ac_cv_func_strlcat=no ac_cv_func_strlcpy=no ac_cv_func_strndup=yes ac_cv_func_strtok_r=yes ac_cv_func_sysmp=no ac_cv_func_timegm=yes ac_cv_func_utimes=yes ac_cv_func_vasprintf=yes ac_cv_func_vprintf=yes ac_cv_func_vsnprintf=yes ac_cv_func_which_localtime_r=struct ac_cv_have_x='have_x=yes ac_x_includes= ac_x_libraries=' ac_cv_header_arpa_inet_h=yes ac_cv_header_atomic_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_errno_h=yes ac_cv_header_fstream=yes ac_cv_header_fstream_h=no ac_cv_header_ieeefp_h=no ac_cv_header_inttypes_h=yes ac_cv_header_iostream=yes ac_cv_header_iostream_h=no ac_cv_header_limits=yes ac_cv_header_malloc_h=yes ac_cv_header_memory_h=yes ac_cv_header_netdb_h=yes ac_cv_header_netinet_in_h=yes ac_cv_header_netinet_tcp_h=yes ac_cv_header_paths_h=yes ac_cv_header_poll_h=yes ac_cv_header_signal_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_strstrea_h=no ac_cv_header_strstream=yes ac_cv_header_strstream_h=no ac_cv_header_sys_ioctl_h=yes ac_cv_header_sys_mount_h=yes ac_cv_header_sys_select_h=yes ac_cv_header_sys_socket_h=yes ac_cv_header_sys_sockio_h=no ac_cv_header_sys_stat_h=yes ac_cv_header_sys_statvfs_h=yes ac_cv_header_sys_sysinfo_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_vfs_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_header_wchar_h=yes ac_cv_header_windows_h=no ac_cv_host=i686-pc-linux-gnu ac_cv_host_alias=i686-pc-linux-gnu ac_cv_lib_ICE_IceConnectionNumber=yes ac_cv_lib_OSMesa_OSMesaCreateContext=no ac_cv_lib_Xext_XextCreateExtension=yes ac_cv_lib_Xmu_XmuMakeAtom=yes ac_cv_lib_Xt_XtMainLoop=yes ac_cv_lib_glut_glutInit=yes ac_cv_lib_nsl_gethostbyname=yes ac_cv_lib_resolv_res_search=yes ac_cv_lib_socket_connect=no ac_cv_member_struct_sockaddr_in_sin_len=no ac_cv_member_struct_tm___tm_zone=no ac_cv_member_struct_tm_tm_zone=yes ac_cv_objext=o ac_cv_path_PYTHON=/usr/bin/python ac_cv_path_PYTHON25=/usr/bin/python2.5 ac_cv_path_TAIL=/usr/bin/tail ac_cv_path_freetype_config=/usr/bin/freetype-config ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mysql_config=/usr/bin/mysql_config ac_cv_prog_AR='ar cr' ac_cv_prog_CPP='/usr/lib/distcc/bin/gcc -E' ac_cv_prog_CXXCPP='/usr/lib/distcc/bin/g++ -E' ac_cv_prog_LORDER=echo ac_cv_prog_TSORT=tsort ac_cv_prog_VALGRIND_PATH=valgrind ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_cxx_g=yes ac_cv_prog_egrep='grep -E' ac_cv_search_clock_gettime=-lrt ac_cv_search_cplus_demangle=no ac_cv_search_dlopen=-ldl ac_cv_search_iconv='none required' ac_cv_search_kstat_open=no ac_cv_search_rstat=no ac_cv_search_sched_yield='none required' ac_cv_search_setkey=-lcrypt ac_cv_sizeof___int64=0 ac_cv_sizeof_char=1 ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=4 ac_cv_sizeof_long_double=12 ac_cv_sizeof_long_long=8 ac_cv_sizeof_short=2 ac_cv_sizeof_size_t=4 ac_cv_sizeof_voidp=4 ac_cv_type___int64=no ac_cv_type_char=yes ac_cv_type_double=yes ac_cv_type_float=yes ac_cv_type_int=yes ac_cv_type_intptr_t=yes ac_cv_type_long=yes ac_cv_type_long_double=yes ac_cv_type_long_long=yes ac_cv_type_short=yes ac_cv_type_signal=void ac_cv_type_size_t=yes ac_cv_type_socklen_t=yes ac_cv_type_uintptr_t=yes ac_cv_type_union_semun=no ac_cv_type_voidp=yes ac_cv_type_wstring_linkable=yes am_cv_proto_iconv='extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);' am_cv_proto_iconv_arg1= ncbi_cv_c_attribute_destructor=yes ncbi_cv_c_deprecation_syntax='__attribute__((__deprecated__))' ncbi_cv_c_forceinline='inline __attribute__((always_inline))' ncbi_cv_c_restrict=__restrict__ ncbi_cv_cpp_gnu_varargs=yes ncbi_cv_cpp_std_varargs=yes ncbi_cv_cxx_auto_sb_dest=no ncbi_cv_cxx_restrict=__restrict__ ncbi_cv_cxx_throw_spec=yes ncbi_cv_decl_fionbio_needs_bsd_comp=no ncbi_cv_decl_inaddr_none=yes ncbi_cv_func_gethostbyaddr_r=8 ncbi_cv_func_gethostbyname_r=6 ncbi_cv_func_getlogin_r=yes ncbi_cv_func_getpwuid_r=5 ncbi_cv_func_getservbyname_r=6 ncbi_cv_func_ios_register_callback=yes ncbi_cv_func_is_sorted=no ncbi_cv_func_min_max=yes ncbi_cv_func_pthread_mutex=yes ncbi_cv_func_readdir_r=3 ncbi_cv_func_select_updates_timeout=yes ncbi_cv_func_strcasecmp_lc=yes ncbi_cv_func_string_compare_obsolete=yes ncbi_cv_func_sysinfo_1=yes ncbi_cv_lib_berkeley_db=yes ncbi_cv_lib_berkeley_db_cxx=no ncbi_cv_lib_berkeley_db_version=4.8.30 ncbi_cv_lib_boost_regex=no ncbi_cv_lib_boost_test=no ncbi_cv_lib_boost_thread=no ncbi_cv_lib_bz2=yes ncbi_cv_lib_cppunit=no ncbi_cv_lib_ctools=no ncbi_cv_lib_expat=yes ncbi_cv_lib_fcgi=no ncbi_cv_lib_fltk=no ncbi_cv_lib_freetype=yes ncbi_cv_lib_freetype_fix_include=no ncbi_cv_lib_gif=yes ncbi_cv_lib_gnutls=yes ncbi_cv_lib_icu=yes ncbi_cv_lib_jpeg=yes ncbi_cv_lib_libxml=yes ncbi_cv_lib_libxslt=yes ncbi_cv_lib_lzo2=yes ncbi_cv_lib_mysql=yes ncbi_cv_lib_oechem=no ncbi_cv_lib_opengl=yes ncbi_cv_lib_openssl=yes ncbi_cv_lib_orbacus=no ncbi_cv_lib_pcre=yes ncbi_cv_lib_png=yes ncbi_cv_lib_python=yes ncbi_cv_lib_python23=no ncbi_cv_lib_python24=no ncbi_cv_lib_python25=yes ncbi_cv_lib_sablot=yes ncbi_cv_lib_sqlite=yes ncbi_cv_lib_sqlite3=yes ncbi_cv_lib_sybase=no ncbi_cv_lib_sybase_r=no ncbi_cv_lib_tiff=yes ncbi_cv_lib_ungif=no ncbi_cv_lib_wxwidgets=no ncbi_cv_lib_wxwindows=no ncbi_cv_lib_xalan_c=no ncbi_cv_lib_xerces_c=no ncbi_cv_lib_xpm=yes ncbi_cv_lib_z=yes ncbi_cv_prog_cc_wl_e=yes ncbi_cv_prog_cc_wl_no_asu=no ncbi_cv_prog_ranlib_effect=neutral ncbi_cv_sys_semaphores=yes ncbi_cv_sys_stack_dir=down ncbi_cv_sys_unaligned_reads=yes ncbi_cv_sys_xdir_ln=yes ncbi_cv_type_auto_ptr_works=yes ncbi_cv_type_char_traits=yes ncbi_cv_type_ios_base=yes ncbi_cv_with_version=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ALLOW_UNDEF='' AMQ='' APP_LDFLAGS='-Wl,-E ' APP_LIBS_SETTING='$(LIBS)' APP_LIB_SETTING='$(LIB)' APP_NOCOPY='' APP_OR_NULL='app' AR='ar cr' AR_FILTER='' AR_WRAPPER='' BDB_CACHE_LIB='ncbi_xcache_bdb' BDB_LIB='bdb' BERKELEYDB_CXX_LIBS='' BERKELEYDB_CXX_STATIC_LIBS='' BERKELEYDB_INCLUDE='' BERKELEYDB_LIBS='-ldb' BERKELEYDB_STATIC_LIBS='-ldb' BINCOPY='/bin/sh $(top_srcdir)/scripts/common/impl/if_diff.sh "ln -f"' BOOST_INCLUDE='' BOOST_LIBPATH='' BOOST_REGEX_LIBS='' BOOST_REGEX_STATIC_LIBS='' BOOST_TAG='' BOOST_TEST_PEM_LIBS='' BOOST_TEST_PEM_STATIC_LIBS='' BOOST_TEST_TEM_LIBS='' BOOST_TEST_TEM_STATIC_LIBS='' BOOST_TEST_UTF_LIBS='' BOOST_TEST_UTF_STATIC_LIBS='' BOOST_THREAD_LIBS='' BOOST_THREAD_STATIC_LIBS='' BZ2_INCLUDE=' -I/usr/include' BZ2_LIB='' BZ2_LIBS='-L/usr/lib -Wl,-rpath,/usr/lib -lbz2 ' CC='/usr/lib/distcc/bin/gcc ' CCACHE='' CC_FILTER='' CC_WRAPPER='' CFLAGS=' -Wall -Wno-format-y2k -pthread -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -fPIC' CFLAGS_DLL='' CHECK_ARG='' CHECK_TOOLS='' COMPILER='gcc' CONNEXT='' CPP='/usr/lib/distcc/bin/gcc -E' CPPFLAGS='-DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -fpermissive -D_MT -D_REENTRANT -D_THREAD_SAFE' CPPUNIT_INCLUDE='' CPPUNIT_LIBS='' CRYPT_LIBS='-lcrypt' CXX='/usr/lib/distcc/bin/g++ ' CXXCPP='/usr/lib/distcc/bin/g++ -E' CXXFLAGS=' -Wall -Wno-format-y2k -pthread -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -fPIC' CXXFLAGS_DLL='' CXX_FILTER='' CXX_WRAPPER='' C_LIBS='-lm -lpthread' C_LINK='$(CC)' DBAPI_CTLIB='' DBAPI_DBLIB='' DBAPI_MYSQL='ncbi_xdbapi_mysql' DBAPI_ODBC='' DBAPI_SQLITE3='ncbi_xdbapi_sqlite3' DEBUG_SFX='Release' DEFS='-DHAVE_CONFIG_H' DEMANGLE_LIBS='' DEPFLAGS='-M' DEPFLAGS_POST='' DISTCC='' DLL='' DLL_LDFLAGS='' DLL_LIB_SETTING='$(DLL_DLIB)' DL_LIBS='-ldl' D_SFX='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='grep -E' EGREP_Q='grep -E -q' EXEEXT='' EXPAT_INCLUDE=' ' EXPAT_LIBS='-lexpat ' EXPAT_STATIC_LIBS='-lexpat ' FASTCGI_INCLUDE='' FASTCGI_LIBS='' FASTCGI_OBJS='' FAST_CFLAGS=' -Wall -Wno-format-y2k -pthread -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -fPIC -O9 -finline-functions -ffast-math -fstrict-aliasing -fomit-frame-pointer' FAST_CXXFLAGS=' -Wall -Wno-format-y2k -pthread -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -fPIC -O9 -finline-functions -ffast-math -fstrict-aliasing -fomit-frame-pointer' FAST_LDFLAGS=' -pthread -Wl,-O1 -O9 -finline-functions -ffast-math -fstrict-aliasing -fomit-frame-pointer' FLTK_CONFIG='' FLTK_INCLUDE='' FLTK_LIBS='' FLTK_LIBS_ALL='' FLTK_LIBS_GL='' FLTK_LIBS_IMAGES='' FLTK_STATIC_LIBS='' FLTK_STATIC_LIBS_ALL='' FLTK_STATIC_LIBS_GL='' FLTK_STATIC_LIBS_IMAGES='' FORBID_UNDEF='-Wl,--no-undefined' FORCE_STATIC_LIB='' FREETYPE_INCLUDE='-I/usr/include/freetype2' FREETYPE_LIBS='-lfreetype -lz' FTDS63_INCLUDE='' FTDS63_LIB='' FTDS63_LIBS='' FTDS64_CTLIB_INCLUDE='' FTDS64_CTLIB_LIB='' FTDS64_CTLIB_LIBS='' FTDS64_DBLIB_INCLUDE='' FTDS64_DBLIB_LIB='' FTDS64_DBLIB_LIBS='' FTDS64_INCLUDE='' FTDS64_LIB='' FTDS64_LIBS='' FTDS64_ODBC_INCLUDE='' FTDS64_ODBC_LIB='' FTDS64_ODBC_LIBS='' FTDS8_INCLUDE='' FTDS8_LIB='' FTDS8_LIBS='' FTDS_INCLUDE='' FTDS_LIB='' FTDS_LIBS='' GCCPCH='#' GIF_INCLUDE=' ' GIF_LIBS='-lgif -lX11' GLUT_INCLUDE='' GLUT_LIBS=' -L/lib -Wl,-rpath,/lib -lglut -lGLU -lGL -lXmu -lXt -lXext -lSM -lICE -lX11 ' GNUTLS_INCLUDE=' ' GNUTLS_LIBS='-lgnutls ' ICONV_LIBS='' ICU_CONFIG='/usr/bin/icu-config' ICU_INCLUDE='-I/usr/include ' ICU_LIBS='-lpthread -ldl -lm -L/usr/lib -Wl,-rpath,/usr/lib -licui18n -licuuc -licudata -lpthread -ldl -lm' ICU_STATIC_LIBS=' -lpthread -ldl -lm -L/usr/lib -lsicui18n -lsicuuc -lsicudata -lpthread -ldl -lm ' IF_DEACTIVATING='' IF_REBUILDING_CONDITIONALLY='#' IF_REBUILDING_LIBS='#' IF_WITH_DLL='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' JPEG_INCLUDE=' ' JPEG_LIBS='-ljpeg ' KSTAT_LIBS='' KeepStateTarget='' LDFLAGS=' -pthread -Wl,-O1 -O' LIBGNUTLS_CONFIG='' LIBIMR='' LIBOB='' LIBOBJS='' LIBS='-lm -lpthread' LIBSSSDB='' LIBSSSUTILS='' LIBXML_INCLUDE='-I/usr/include/libxml2' LIBXML_LIBS='-lxml2 ' LIBXML_STATIC_LIBS='-lxml2 ' LIBXSLT_INCLUDE='-I/usr/include/libxml2 ' LIBXSLT_LIBS='-lxslt ' LIBXSLT_STATIC_LIBS='-lxslt ' LIB_OR_DLL='dll' LINK='$(CXX)' LINK_DLL='$(CXX) -shared -o' LINK_FILTER='' LINK_LOADABLE='' LINK_WRAPPER='' LN_S='ln -s' LORDER='echo' LTLIBOBJS='' LZO2_INCLUDE=' ' LZO2_LIBS='-llzo2 ' LZO_INCLUDE=' ' LZO_LIBS='-llzo2 ' MATH_LIBS='-lm' MT_SFX='MT' MYSQL_INCLUDE='-I/usr/include/mysql -DHAVE_ERRNO_AS_DEFINE=1 -DUNIV_LINUX -DUNIV_LINUX' MYSQL_LIBS='-Wl,-O1 -rdynamic -L/usr/lib/mysql -Wl,-rpath,/usr/lib/mysql -lmysqlclient -L/usr//lib -Wl,-rpath,/usr//lib -lz -lcrypt -lnsl -lm -L/usr/lib/ -Wl,-rpath,/usr/lib/ -lssl -lcrypto' NCBIATOMIC_LIB='' NCBI_C_INCLUDE='' NCBI_C_LIBPATH='' NCBI_C_ncbi='' NCBI_PLATFORM_BITS='32' NCBI_SSS_INCLUDE='' NCBI_SSS_LIBPATH='' NETWORK_LIBS='-lnsl' NETWORK_PURE_LIBS='-lnsl' OBJEXT='o' ODBC_INCLUDE='-I$(includedir)/dbapi/driver/odbc/unix_odbc -I$(includedir0)/dbapi/driver/odbc/unix_odbc' ODBC_LIBS='' OECHEM_INCLUDE='' OECHEM_LIBS='' OPENGL_INCLUDE='' OPENGL_LIBS='-L/lib -Wl,-rpath,/lib -lGLU -lGL -lXmu -lXt -lXext -lSM -lICE -lX11 ' OPENGL_STATIC_LIBS='-L/lib -Wl,-rpath,/lib -lGLU -lGL -lXmu -lXt -lXext -lSM -lICE -lX11 ' OPENSSL_INCLUDE=' -I/usr/include' OPENSSL_LIBS='-L/usr/lib -Wl,-rpath,/usr/lib -lssl -lcrypto' OPT_GROUPS='' ORBACUS_INCLUDE='' ORBACUS_LIBPATH='' OSMESA_INCLUDE='' OSMESA_LIBS='' OSMESA_STATIC_LIBS='' OSTYPE='linux' PACKAGE_BUGREPORT='cpp-core@ncbi.nlm.nih.gov' PACKAGE_NAME='ncbi-tools++' PACKAGE_STRING='ncbi-tools++ 0.0' PACKAGE_TARNAME='ncbi-tools--' PACKAGE_VERSION='0.0' PATH_SEPARATOR=':' PCREPOSIX_LIBS='-L/usr/lib -Wl,-rpath,/usr/lib -lpcreposix -lpcre ' PCRE_INCLUDE=' -I/usr/include' PCRE_LIB='' PCRE_LIBS='-L/usr/lib -Wl,-rpath,/usr/lib -lpcre ' PNG_INCLUDE=' -I/usr/include ' PNG_LIBS='-lpng -L/usr/lib -Wl,-rpath,/usr/lib -lz ' PROJECTS='' PYTHON23='' PYTHON23_INCLUDE='' PYTHON23_LIBS='' PYTHON24='' PYTHON24_INCLUDE='' PYTHON24_LIBS='' PYTHON25='/usr/bin/python2.5' PYTHON25_INCLUDE='-I/usr/include/python2.5 -I/usr/include/python2.5' PYTHON25_LIBS='-L/usr/lib -L/usr/lib/python2.5/config -Wl,-rpath,/usr/lib:/usr/lib/python2.5/config -lpython2.5 -lpthread -ldl -lutil -lm' PYTHON='/usr/bin/python' PYTHON_INCLUDE='-I/usr/include/python2.6 -I/usr/include/python2.6' PYTHON_LIBS='-L/usr/lib -L/usr/lib/python2.6/config -Wl,-rpath,/usr/lib:/usr/lib/python2.6/config -lpython2.6 -lpthread -ldl -lutil -lm' RANLIB='ranlib' RESOLVER_LIBS='-lresolv' RPCSVC_LIBS='' RT_LIBS='-lrt' RUNPATH_ORIGIN='-Wl,-rpath,'$$ORIGIN'' Rules='rules_with_autodep' SABLOT_INCLUDE=' ' SABLOT_LIBS='-lsablot -lexpat ' SABLOT_STATIC_LIBS='-lsablot -lexpat ' SHELL='/bin/sh' SP_INCLUDE='' SP_LIBS='' SQLITE3_INCLUDE=' ' SQLITE3_LIBS='-lsqlite3 ' SQLITE_INCLUDE=' ' SQLITE_LIBS='-lsqlite ' STATIC='' STRIP='@:' SYBASE_DBLIBS='' SYBASE_DLLS='' SYBASE_INCLUDE='' SYBASE_LCL_PATH='' SYBASE_LIBS='' SYBASE_PATH='No_Sybase' TAIL='/usr/bin/tail' TAIL_N='/usr/bin/tail -n ' THREAD_LIBS='-lpthread' TIFF_INCLUDE=' ' TIFF_LIBS='-ltiff -L/usr/lib -Wl,-rpath,/usr/lib -lz ' TLS_INCLUDE=' ' TLS_LIBS='-lgnutls ' TSORT='cat' UNGIF_INCLUDE='' UNGIF_LIBS='' UNIX_SRC='$(UNIX_SRC)' UNIX_USR_PROJ='$(UNIX_USR_PROJ)' UNLESS_PUBSEQOS='' UNLESS_WITH_DLL='# ' USUAL_AND_DLL='dll' USUAL_AND_LIB='both' VALGRIND_PATH='valgrind' WXWIDGETS_GL_LIBS='' WXWIDGETS_GL_STATIC_LIBS='' WXWIDGETS_INCLUDE='' WXWIDGETS_LIBS='' WXWIDGETS_POST_LINK=':' WXWIDGETS_STATIC_LIBS='' WXWIN_GL_LIBS='' WXWIN_GL_STATIC_LIBS='' WXWIN_INCLUDE='' WXWIN_LIBS='' WXWIN_POST_LINK=':' WXWIN_STATIC_LIBS='' XALAN_INCLUDE='' XALAN_LIBS='' XALAN_STATIC_LIBS='' XCONNEXT='' XERCES_INCLUDE='' XERCES_LIBS='' XERCES_STATIC_LIBS='' XPM_INCLUDE=' ' XPM_LIBS='-lXpm -lX11' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS=' -lSM -lICE' Z_INCLUDE=' -I/usr/include' Z_LIB='' Z_LIBS='-L/usr/lib -Wl,-rpath,/usr/lib -lz ' ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_RANLIB='ranlib' algo='algo' app='app' bdb='bdb' bindir='${exec_prefix}/bin' build='i686-pc-linux-gnu' build_alias='' build_cpu='i686' build_os='linux-gnu' build_root='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/work/ncbi_cxx--May_15_2009/GCC444-ReleaseMTDLL' build_vendor='pc' builddir='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/work/ncbi_cxx--May_15_2009/GCC444-ReleaseMTDLL/build' check='' compiler='GCC' compiler_root='/usr/lib/distcc' compiler_version='444' configurables_mfname='configurables' datadir='${prefix}/share' dbapi='dbapi' dll_ext='.so' exe_ext='' exec_prefix='${prefix}' f_compile='-c ' f_libpath='-L' f_outexe='-o ' f_outlib='' f_outobj='-o ' f_runpath='-Wl,-rpath,' freetds='' freetype_config='/usr/bin/freetype-config' ftds63='' ftds64='' ftds8='' gui='' has_dll_loadable='@# ' host='i686-pc-linux-gnu' host_alias='' host_cpu='i686' host_os='linux-gnu' host_vendor='pc' includedir='${prefix}/include' infodir='${prefix}/info' internal='' lib_ext='.a' lib_l_ext='' lib_l_pre='-l' lib_pre='lib' libdir='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/image//usr/lib/ncbi-tools++' libexecdir='${exec_prefix}/libexec' loadable_ext='.so' local_lbsm='ncbi_lbsmd_stub' localstatedir='${prefix}/var' make_shell='SHELL=/bin/sh' mandir='${prefix}/man' mysql_config='/usr/bin/mysql_config' ncbi_crypt='ncbi_crypt_stub' ncbi_runpath='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/image//usr/lib/ncbi-tools++' ncbi_xreader_pubseqos='' ncbicntr='' obj_ext='.o' objects='objects' oldincludedir='/usr/include' prefix='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/image//usr' program_transform_name='s,x,x,' runpath='-Wl,-rpath,/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/image//usr/lib/ncbi-tools++ -Wl,-rpath-link,$(libdir)' sbindir='${exec_prefix}/sbin' script_shell='#! /bin/sh' serial='serial' serial_ws50_rtti_kludge='' sharedstatedir='${prefix}/com' signature='GCC_444-ReleaseMTDLL--i686-pc-linux2.6.31.12-gnu2.11.2-vrapenec' srcdir='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/work/ncbi_cxx--May_15_2009' status_dir='/var/tmp/portage/sci-biology/ncbi-tools++-2009.05.15-r4/work/ncbi_cxx--May_15_2009/GCC444-ReleaseMTDLL/status' sysconfdir='${prefix}/etc' target_alias='' top_srcdir='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define HAVE_ARPA_INET_H 1 #define HAVE_ASPRINTF 1 #define HAVE_ATOLL 1 #define HAVE_ATTRIBUTE_DESTRUCTOR 1 #define HAVE_BASENAME 1 #define HAVE_BDB 1 #define HAVE_BDB_CACHE 1 #define HAVE_BERKELEY_DB 1 #define HAVE_BOOST_SPIRIT 1 #define HAVE_CPP_GNU_VARARGS 1 #define HAVE_CPP_STD_VARARGS 1 #define HAVE_DLFCN_H 1 #define HAVE_ERF 1 #define HAVE_ERRNO_H 1 #define HAVE_EUIDACCESS 1 #define HAVE_FREETYPE 1 #define HAVE_FSEEKO 1 #define HAVE_FSTREAM 1 #define HAVE_FUNC_LOCALTIME_R_TM 1 #define HAVE_GETADDRINFO 1 #define HAVE_GETHOSTBYADDR_R 8 #define HAVE_GETHOSTBYNAME_R 6 #define HAVE_GETHOSTENT_R 1 #define HAVE_GETLOADAVG 1 #define HAVE_GETLOGIN_R 1 #define HAVE_GETNAMEINFO 1 #define HAVE_GETPAGESIZE 1 #define HAVE_GETPWUID 1 #define HAVE_GETRUSAGE 1 #define HAVE_GETSERVBYNAME_R 6 #define HAVE_GETTIMEOFDAY 1 #define HAVE_GETUID 1 #define HAVE_ICU 1 #define HAVE_INET_NTOP 1 #define HAVE_INTPTR_T 1 #define HAVE_INTTYPES_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_IOSTREAM 1 #define HAVE_IOS_REGISTER_CALLBACK 1 #define HAVE_LCHOWN 1 #define HAVE_LIBBZ2 1 #define HAVE_LIBCRYPT 1 #define HAVE_LIBDL 1 #define HAVE_LIBEXPAT 1 #define HAVE_LIBGIF 1 #define HAVE_LIBGLUT 1 #define HAVE_LIBGNUTLS 1 #define HAVE_LIBICONV 1 #define HAVE_LIBJPEG 1 #define HAVE_LIBLZO 1 #define HAVE_LIBLZO2 1 #define HAVE_LIBOPENSSL 1 #define HAVE_LIBPCRE 1 #define HAVE_LIBPNG 1 #define HAVE_LIBRT 1 #define HAVE_LIBSABLOT 1 #define HAVE_LIBSQLITE 1 #define HAVE_LIBSQLITE3 1 #define HAVE_LIBTIFF 1 #define HAVE_LIBXML 1 #define HAVE_LIBXPM 1 #define HAVE_LIBXSLT 1 #define HAVE_LIBZ 1 #define HAVE_LIMITS 1 #define HAVE_LOCALTIME_R 1 #define HAVE_LUTIMES 1 #define HAVE_MALLOC_H 1 #define HAVE_MEMORY_H 1 #define HAVE_MYSQL 1 #define HAVE_NANOSLEEP 1 #define HAVE_NETDB_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_NETINET_TCP_H 1 #define HAVE_OPENGL 1 #define HAVE_PATHS_H 1 #define HAVE_POLL_H 1 #define HAVE_PTHREAD_ATFORK 1 #define HAVE_PTHREAD_MUTEX 1 #define HAVE_PTHREAD_SETCONCURRENCY 1 #define HAVE_PYTHON 1 #define HAVE_PYTHON25 1 #define HAVE_SCHED_YIELD 1 #define HAVE_SELECT 1 #define HAVE_SIGNAL_H 1 #define HAVE_SOCKLEN_T 1 #define HAVE_SQLLEN 1 #define HAVE_STATFS 1 #define HAVE_STATVFS 1 #define HAVE_STDINT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRCASECMP 1 #define HAVE_STRCASECMP_LC 1 #define HAVE_STRDUP 1 #define HAVE_STRINGS_H 1 #define HAVE_STRING_H 1 #define HAVE_STRNDUP 1 #define HAVE_STRSTREAM 1 #define HAVE_STRTOK_R 1 #define HAVE_STRUCT_TM_TM_ZONE 1 #define HAVE_SYSINFO_1 1 #define HAVE_SYSV_SEMAPHORES 1 #define HAVE_SYS_IOCTL_H 1 #define HAVE_SYS_MOUNT_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_STATVFS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_SYSINFO_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_VFS_H 1 #define HAVE_TIMEGM 1 #define HAVE_UINTPTR_T 1 #define HAVE_UNALIGNED_READS 1 #define HAVE_UNISTD_H 1 #define HAVE_UNISTD_H 1 #define HAVE_UTIMES 1 #define HAVE_VASPRINTF 1 #define HAVE_VPRINTF 1 #define HAVE_VSNPRINTF 1 #define HAVE_WCHAR_H 1 #define HAVE_WSTRING 1 #define HOST "i686-pc-linux-gnu" #define HOST_CPU "i686" #define HOST_OS "linux-gnu" #define HOST_VENDOR "pc" #define ICONV_CONST #define NCBI_BIN_RELEASE 1 #define NCBI_COMPILER "GCC" #define NCBI_COMPILER_GCC 1 #define NCBI_COMPILER_VERSION 444 #define NCBI_CXX_TOOLKIT 1 #define NCBI_DEPRECATED __attribute__((__deprecated__)) #define NCBI_DLL_BUILD 1 #define NCBI_DLL_SUPPORT 1 #define NCBI_FORCEINLINE inline __attribute__((always_inline)) #define NCBI_HAVE_GETPWUID_R 5 #define NCBI_HAVE_READDIR_R 3 #define NCBI_OBSOLETE_STR_COMPARE 1 #define NCBI_OS "UNIX" #define NCBI_OS_LINUX 1 #define NCBI_OS_UNIX 1 #define NCBI_PLATFORM_BITS 32 #define NCBI_PLUGIN_AUTO_LOAD 1 #define NCBI_RESTRICT_C __restrict__ #define NCBI_RESTRICT_CXX __restrict__ #define NCBI_SIGNATURE "GCC_444-ReleaseMTDLL--i686-pc-linux2.6.31.12-gnu2.11.2-vrapenec" #define NCBI_USE_THROW_SPEC 1 #define RETSIGTYPE void #define SELECT_UPDATES_TIMEOUT 1 #define SIZEOF_CHAR 1 #define SIZEOF_DOUBLE 8 #define SIZEOF_FLOAT 4 #define SIZEOF_INT 4 #define SIZEOF_LONG 4 #define SIZEOF_LONG_DOUBLE 12 #define SIZEOF_LONG_LONG 8 #define SIZEOF_SHORT 2 #define SIZEOF_SIZE_T 4 #define SIZEOF_VOIDP 4 #define SIZEOF___INT64 0 #define STACK_GROWS_DOWN 1 #define STDC_HEADERS 1 #define TIME_WITH_SYS_TIME 1 #define _GNU_SOURCE 1 #endif #ifdef __cplusplus extern "C" void exit (int) throw (); configure: exit 0