--- mira-3.0.0.ebuild.orig 2010-02-03 17:06:52.000000000 +0100 +++ mira-3.0.0.ebuild 2010-02-17 18:11:09.000000000 +0100 @@ -6,7 +6,7 @@ MIRA_3RDPARTY_PV="31-01-2010" -inherit base autotools +inherit autotools base eutils DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina" HOMEPAGE="http://www.chevreux.org/projects_mira.html" @@ -26,6 +26,8 @@ src_prepare() { find -name 'configure*' -or -name 'Makefile*' | xargs sed -i 's/flex++/flex -+/' || die + epatch "${FILESDIR}"/${P}-as-needed.patch + find -name Makefile.am -exec sed -i -e 's:-lexpat:$(EXPAT_LIBS)' {} \; || die "sed failed" AT_M4DIR="config/m4" eautoreconf }