build.log

pytables-build.log (text/plain), 54.35 KB, created by Christian Faulhammer (RETIRED) on 2010-01-19 10:31:01 UTC

>>> Unpacking source...
>>> Unpacking tables-2.1.2.tar.gz to /var/tmp/portage/dev-python/pytables-2.1.2/work
>>> Source unpacked in /var/tmp/portage/dev-python/pytables-2.1.2/work
>>> Preparing source in /var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2 ...
 [32;01m*[0m Applying pytables-2.1.2-failingtests.patch ...
[A[134C  [34;01m[ [32;01mok[34;01m ][0m
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2 ...
python2.6 setup.py build
* Found numpy 1.3.0 package installed.
* Found HDF5 headers at ``/usr/include``, library at ``/usr/lib``.
* Found LZO 2 headers at ``/usr/include``, library at ``/usr/lib``.
* Skipping detection of LZO 1 since LZO 2 has already been found.
* Found bzip2 headers at ``/usr/include``, library at ``/lib``.
[39mrunning build[0m
[39mrunning build_py[0m
[39mcreating build[0m
[39mcreating build/lib.linux-i686-2.6[0m
[39mcreating build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/vlarray.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/filters.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/path.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/array.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/attributeset.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/_conditions_common.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/exceptions.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/_parameters_common.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/leaf.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/node.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/__init__.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/file.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/flavor.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/parameters.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/earray.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/registry.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/carray.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/description.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/unimplemented.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/conditions.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/group.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/_table_common.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/table.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/undoredo.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/utils.py -> build/lib.linux-i686-2.6/tables[0m
[39mcopying tables/atom.py -> build/lib.linux-i686-2.6/tables[0m
[39mcreating build/lib.linux-i686-2.6/tables/nodes[0m
[39mcopying tables/nodes/__init__.py -> build/lib.linux-i686-2.6/tables/nodes[0m
[39mcopying tables/nodes/filenode.py -> build/lib.linux-i686-2.6/tables/nodes[0m
[39mcreating build/lib.linux-i686-2.6/tables/scripts[0m
[39mcopying tables/scripts/ptdump.py -> build/lib.linux-i686-2.6/tables/scripts[0m
[39mcopying tables/scripts/ptrepack.py -> build/lib.linux-i686-2.6/tables/scripts[0m
[39mcopying tables/scripts/__init__.py -> build/lib.linux-i686-2.6/tables/scripts[0m
[39mcreating build/lib.linux-i686-2.6/tables/numexpr[0m
[39mcopying tables/numexpr/info.py -> build/lib.linux-i686-2.6/tables/numexpr[0m
[39mcopying tables/numexpr/setup.py -> build/lib.linux-i686-2.6/tables/numexpr[0m
[39mcopying tables/numexpr/__init__.py -> build/lib.linux-i686-2.6/tables/numexpr[0m
[39mcopying tables/numexpr/compiler.py -> build/lib.linux-i686-2.6/tables/numexpr[0m
[39mcopying tables/numexpr/expressions.py -> build/lib.linux-i686-2.6/tables/numexpr[0m
[39mcreating build/lib.linux-i686-2.6/tables/nra[0m
[39mcopying tables/nra/__init__.py -> build/lib.linux-i686-2.6/tables/nra[0m
[39mcopying tables/nra/attributeaccess.py -> build/lib.linux-i686-2.6/tables/nra[0m
[39mcopying tables/nra/nestedrecords.py -> build/lib.linux-i686-2.6/tables/nra[0m
[39mcopying tables/nra/nriterators.py -> build/lib.linux-i686-2.6/tables/nra[0m
[39mcreating build/lib.linux-i686-2.6/tables/netcdf3[0m
[39mcopying tables/netcdf3/__init__.py -> build/lib.linux-i686-2.6/tables/netcdf3[0m
[39mcreating build/lib.linux-i686-2.6/tables/netcdf3/scripts[0m
[39mcopying tables/netcdf3/scripts/__init__.py -> build/lib.linux-i686-2.6/tables/netcdf3/scripts[0m
[39mcopying tables/netcdf3/scripts/nctoh5.py -> build/lib.linux-i686-2.6/tables/netcdf3/scripts[0m
[39mcreating build/lib.linux-i686-2.6/tables/misc[0m
[39mcopying tables/misc/enum.py -> build/lib.linux-i686-2.6/tables/misc[0m
[39mcopying tables/misc/lrucache.py -> build/lib.linux-i686-2.6/tables/misc[0m
[39mcopying tables/misc/__init__.py -> build/lib.linux-i686-2.6/tables/misc[0m
[39mcopying tables/misc/proxydict.py -> build/lib.linux-i686-2.6/tables/misc[0m
[39mcreating build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_tablesMD.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_basics.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_do_undo.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_tree.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_all.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_carray.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_earray.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_enum.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_Numeric.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_create.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_queries.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_numpy.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_vlarray.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_array.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/__init__.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/check_leaks.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_tables.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_types.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_timetype.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_lists.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_nestedtypes.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/common.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_attributes.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_numarray.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_backcompat.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_hdf5compat.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_garbage.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_index_backcompat.py -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcreating build/lib.linux-i686-2.6/tables/numexpr/tests[0m
[39mcopying tables/numexpr/tests/test_numexpr.py -> build/lib.linux-i686-2.6/tables/numexpr/tests[0m
[39mcopying tables/numexpr/tests/__init__.py -> build/lib.linux-i686-2.6/tables/numexpr/tests[0m
[39mcreating build/lib.linux-i686-2.6/tables/nodes/tests[0m
[39mcopying tables/nodes/tests/__init__.py -> build/lib.linux-i686-2.6/tables/nodes/tests[0m
[39mcopying tables/nodes/tests/test_filenode.py -> build/lib.linux-i686-2.6/tables/nodes/tests[0m
[39mcreating build/lib.linux-i686-2.6/tables/netcdf3/tests[0m
[39mcopying tables/netcdf3/tests/__init__.py -> build/lib.linux-i686-2.6/tables/netcdf3/tests[0m
[39mcopying tables/netcdf3/tests/test_netcdf3.py -> build/lib.linux-i686-2.6/tables/netcdf3/tests[0m
[39mcreating build/lib.linux-i686-2.6/tables/nra/tests[0m
[39mcopying tables/nra/tests/test_nestedrecords.py -> build/lib.linux-i686-2.6/tables/nra/tests[0m
[39mcopying tables/nra/tests/__init__.py -> build/lib.linux-i686-2.6/tables/nra/tests[0m
[39mcopying tables/nra/tests/test_nriterators.py -> build/lib.linux-i686-2.6/tables/nra/tests[0m
[39mcopying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_unsupptype.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/zerodim-attrs-1.4.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/non-chunked-table.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/Tables_lzo2_shuffle.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_f64be.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/Tables_lzo2.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/ex-noattr.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/zerodim-attrs-1.3.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/indexes_2_0.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/nested-type-with-gaps.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_i32le.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/idx-std-1.x.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/test_szip.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_compound_chunked.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/attr-u16.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_f64le.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_i64be.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_enum.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_i64le.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_i32be.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/times-nested-be.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/time-table-vlarray-1_x.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/Tables_lzo1.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/vlunicode_endian.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/old-flavors.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/Tables_lzo1_shuffle.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/flavored_vlarrays-format1.6.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/tests/smpl_SDSextendible.h5 -> build/lib.linux-i686-2.6/tables/tests[0m
[39mcopying tables/nodes/tests/test_filenode.dat -> build/lib.linux-i686-2.6/tables/nodes/tests[0m
[39mcopying tables/nodes/tests/test_filenode.xbm -> build/lib.linux-i686-2.6/tables/nodes/tests[0m
[39mcopying tables/nodes/tests/test_filenode_v1.h5 -> build/lib.linux-i686-2.6/tables/nodes/tests[0m
[39mrunning build_ext[0m
[39mbuilding 'tables.utilsExtension' extension[0m
[39mC compiler: i686-pc-linux-gnu-gcc -pthread -DNDEBUG -O2 -march=i686 -pipe -fPIC
[0m
[39mcreating build/temp.linux-i686-2.6[0m
[39mcreating build/temp.linux-i686-2.6/tables[0m
[39mcreating build/temp.linux-i686-2.6/src[0m
[39mcompile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
extra options: '-O2 -march=i686 -pipe -Isrc -DH5_USE_16_API'[0m
[39mi686-pc-linux-gnu-gcc: src/H5ARRAY.c[0m
In file included from /usr/include/python2.6/Python.h:8,
                 from src/utils.h:1,
                 from src/H5ARRAY.c:4:
/usr/include/python2.6/pyconfig.h:1061:1: warning: "_POSIX_C_SOURCE" redefined
In file included from /usr/include/H5public.h:37,
                 from /usr/include/hdf5.h:24,
                 from src/H5ATTR.h:19,
                 from src/H5ARRAY.c:1:
/usr/include/features.h:210:1: warning: this is the location of the previous definition
[39mi686-pc-linux-gnu-gcc: src/H5ATTR.c[0m
[39mi686-pc-linux-gnu-gcc: tables/utilsExtension.c[0m
[39mi686-pc-linux-gnu-gcc: src/utils.c[0m
[39mi686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -O2 -march=i686 -pipe build/temp.linux-i686-2.6/tables/utilsExtension.o build/temp.linux-i686-2.6/src/utils.o build/temp.linux-i686-2.6/src/H5ARRAY.o build/temp.linux-i686-2.6/src/H5ATTR.o -L/usr/lib -lhdf5 -lpython2.6 -o build/lib.linux-i686-2.6/tables/utilsExtension.so[0m
[39mbuilding 'tables.hdf5Extension' extension[0m
[39mC compiler: i686-pc-linux-gnu-gcc -pthread -DNDEBUG -O2 -march=i686 -pipe -fPIC
[0m
[39mcompile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
extra options: '-O2 -march=i686 -pipe -Isrc -DH5_USE_16_API'[0m
[39mi686-pc-linux-gnu-gcc: src/H5VLARRAY.c[0m
In file included from /usr/include/python2.6/Python.h:8,
                 from src/utils.h:1,
                 from src/H5VLARRAY.c:3:
/usr/include/python2.6/pyconfig.h:1061:1: warning: "_POSIX_C_SOURCE" redefined
In file included from /usr/include/H5public.h:37,
                 from /usr/include/hdf5.h:24,
                 from src/H5ATTR.h:19,
                 from src/H5VLARRAY.c:1:
/usr/include/features.h:210:1: warning: this is the location of the previous definition
[39mi686-pc-linux-gnu-gcc: src/typeconv.c[0m
[39mi686-pc-linux-gnu-gcc: src/H5ARRAY-opt.c[0m
[39mi686-pc-linux-gnu-gcc: tables/hdf5Extension.c[0m
[39mi686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -O2 -march=i686 -pipe build/temp.linux-i686-2.6/tables/hdf5Extension.o build/temp.linux-i686-2.6/src/utils.o build/temp.linux-i686-2.6/src/typeconv.o build/temp.linux-i686-2.6/src/H5ARRAY.o build/temp.linux-i686-2.6/src/H5ARRAY-opt.o build/temp.linux-i686-2.6/src/H5VLARRAY.o build/temp.linux-i686-2.6/src/H5ATTR.o -L/usr/lib -lhdf5 -lpython2.6 -o build/lib.linux-i686-2.6/tables/hdf5Extension.so[0m
[39mbuilding 'tables.tableExtension' extension[0m
[39mC compiler: i686-pc-linux-gnu-gcc -pthread -DNDEBUG -O2 -march=i686 -pipe -fPIC
[0m
[39mcompile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
extra options: '-O2 -march=i686 -pipe -Isrc -DH5_USE_16_API'[0m
[39mi686-pc-linux-gnu-gcc: src/H5TB-opt.c[0m
In file included from /usr/include/python2.6/Python.h:8,
                 from src/utils.h:1,
                 from src/H5TB-opt.c:36:
/usr/include/python2.6/pyconfig.h:1061:1: warning: "_POSIX_C_SOURCE" redefined
In file included from /usr/include/stdlib.h:25,
                 from src/H5TB-opt.c:31:
/usr/include/features.h:210:1: warning: this is the location of the previous definition
src/H5TB-opt.c: In function ‘H5TBOread_elements’:
src/H5TB-opt.c:300: warning: passing argument 4 of ‘H5Sselect_elements’ from incompatible pointer type
src/H5TB-opt.c: In function ‘H5TBOwrite_elements’:
src/H5TB-opt.c:509: warning: passing argument 4 of ‘H5Sselect_elements’ from incompatible pointer type
[39mi686-pc-linux-gnu-gcc: tables/tableExtension.c[0m
[39mi686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -O2 -march=i686 -pipe build/temp.linux-i686-2.6/tables/tableExtension.o build/temp.linux-i686-2.6/src/utils.o build/temp.linux-i686-2.6/src/typeconv.o build/temp.linux-i686-2.6/src/H5TB-opt.o build/temp.linux-i686-2.6/src/H5ATTR.o -L/usr/lib -lhdf5 -lpython2.6 -o build/lib.linux-i686-2.6/tables/tableExtension.so[0m
[39mbuilding 'tables._comp_lzo' extension[0m
[39mC compiler: i686-pc-linux-gnu-gcc -pthread -DNDEBUG -O2 -march=i686 -pipe -fPIC
[0m
[39mcompile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
extra options: '-O2 -march=i686 -pipe -Isrc -DH5_USE_16_API'[0m
[39mi686-pc-linux-gnu-gcc: tables/_comp_lzo.c[0m
[39mi686-pc-linux-gnu-gcc: src/H5Zlzo.c[0m
[39mi686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -O2 -march=i686 -pipe build/temp.linux-i686-2.6/tables/_comp_lzo.o build/temp.linux-i686-2.6/src/H5Zlzo.o -L/usr/lib -lhdf5 -llzo2 -lpython2.6 -o build/lib.linux-i686-2.6/tables/_comp_lzo.so[0m
[39mbuilding 'tables._comp_bzip2' extension[0m
[39mC compiler: i686-pc-linux-gnu-gcc -pthread -DNDEBUG -O2 -march=i686 -pipe -fPIC
[0m
[39mcompile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
extra options: '-O2 -march=i686 -pipe -Isrc -DH5_USE_16_API'[0m
[39mi686-pc-linux-gnu-gcc: src/H5Zbzip2.c[0m
[39mi686-pc-linux-gnu-gcc: tables/_comp_bzip2.c[0m
[39mi686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -O2 -march=i686 -pipe build/temp.linux-i686-2.6/tables/_comp_bzip2.o build/temp.linux-i686-2.6/src/H5Zbzip2.o -L/usr/lib -lhdf5 -lbz2 -lpython2.6 -o build/lib.linux-i686-2.6/tables/_comp_bzip2.so[0m
[39mbuilding 'tables.numexpr.interpreter' extension[0m
[39mC compiler: i686-pc-linux-gnu-gcc -pthread -DNDEBUG -O2 -march=i686 -pipe -fPIC
[0m
[39mcreating build/temp.linux-i686-2.6/tables/numexpr[0m
[39mcompile options: '-I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
extra options: '-O2 -march=i686 -pipe -Isrc -DH5_USE_16_API'[0m
[39mi686-pc-linux-gnu-gcc: tables/numexpr/interpreter.c[0m
[39mi686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -O2 -march=i686 -pipe build/temp.linux-i686-2.6/tables/numexpr/interpreter.o -L/usr/lib -lpython2.6 -o build/lib.linux-i686-2.6/tables/numexpr/interpreter.so[0m
[39mrunning build_scripts[0m
[39mcreating build/scripts-2.6[0m
[39mcopying and adjusting utils/ptdump -> build/scripts-2.6[0m
[39mcopying and adjusting utils/ptrepack -> build/scripts-2.6[0m
[39mcopying and adjusting utils/nctoh5 -> build/scripts-2.6[0m
[39mchanging mode of build/scripts-2.6/ptdump from 644 to 755[0m
[39mchanging mode of build/scripts-2.6/ptrepack from 644 to 755[0m
[39mchanging mode of build/scripts-2.6/nctoh5 from 644 to 755[0m
>>> Source compiled.
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
PyTables version:  2.1.2
HDF5 version:      1.8.4
NumPy version:     1.3.0
Zlib version:      1.2.3
LZO version:       2.02 (Oct 17 2005)
BZIP2 version:     1.0.5 (10-Dec-2007)
Python version:    2.6.4 (r264:75706, Jan  8 2010, 17:13:52) 
[GCC 4.3.4]
Platform:          linux2-i686
Byte-ordering:     little
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing only a light (yet comprehensive) subset of the test suite.
If you want a more complete test, try passing the --heavy flag to this script
(or set the 'heavy' parameter in case you are using tables.test() call).
The whole suite will take more than 2 minutes to complete on a relatively
modern CPU and around 80 MB of main memory.
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Numeric (version 24.2) is present. Adding the Numeric test suite.
numarray (version 1.5.2) is present. Adding the numarray test suite.
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EEEEEEEEEEEEEEEEEEEEEEEE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................E.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking read() of chunked layout arrays
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __getitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: Checking chunked layout array __setitem__ special method
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 48, in setUp
    self.populateFile()
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/test_carray.py", line 79, in populateFile
    type=type_)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 1496, in arange
    r = _fillarray(size, start, stride, type)
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 145, in _fillarray
    ptype = _maxtype((start, delta))
  File "/usr/lib/python2.6/site-packages/numarray/numarraycore.py", line 131, in _maxtype
    return PyLevel2Type[_numarray._maxtype(args)]
TypeError: Expecting a python numeric type, got something else.

======================================================================
ERROR: None (tables.netcdf3.tests.test_netcdf3.NetCDFFileTestCase2)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/tests/common.py", line 248, in newmethod
    return oldmethod(self, *args, **kwargs)
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/netcdf3/tests/test_netcdf3.py", line 168, in test_h5tonc
    nobjects, nbytes = f.nctoh5(self.filenc)
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/netcdf3/__init__.py", line 476, in nctoh5
    var = self.createVariable(varname,datatype,ncvar.dimensions,least_significant_digit=lsd,filters=filters)
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/netcdf3/__init__.py", line 292, in createVariable
    var = NetCDFVariable(varname,self,datatype,dimensions,least_significant_digit=least_significant_digit,expectedsize=expectedsize,filters=filters)
  File "/var/tmp/portage/dev-python/pytables-2.1.2/work/tables-2.1.2/build/lib.linux-i686-2.6/tables/netcdf3/__init__.py", line 579, in __init__
    raise ValueError, 'datatype must be one of %s'%_netcdftype_dict.keys()
ValueError: datatype must be one of ['1', 's', 'd', 'f', 'i', 'c', 'F', 'l', 'D']

----------------------------------------------------------------------
Ran 6778 tests in 79.459s

FAILED (errors=25)
Closing remaining open files: /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpsGwkMN.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpajRB9B.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmptgKpNB.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpsgq7iw.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpkfh9Z6.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpkqc3pC.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpD_ELVM.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpj6eaUN.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpchhJv8.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmp44h7o5.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpzLM_VK.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpPpXfbX.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpHrtyki.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpKjgnlU.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpCsL9kW.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpggXiDd.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpyeVCxw.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpzWB0XD.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmp5zth4t.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmp54k7Oc.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpeMvD_V.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpV7XJpf.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpG0fHwV.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmppliL6h.h5... done /var/tmp/portage/dev-python/pytables-2.1.2/temp/tmpTLlOH_.h5... done
 [31;01m*[0m 
 [31;01m*[0m ERROR: dev-python/pytables-2.1.2 failed.
 [31;01m*[0m Call stack:
 [31;01m*[0m               ebuild.sh, line   49:  Called src_test
 [31;01m*[0m             environment, line 3572:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m       PYTHONPATH=. "${python}" tables/tests/test_all.py || die "tests failed"
 [31;01m*[0m  The die message:
 [31;01m*[0m   tests failed
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the topmost build error, and the call stack if relevant.
 [31;01m*[0m A complete build log is located at '/var/tmp/portage/dev-python/pytables-2.1.2/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/dev-python/pytables-2.1.2/temp/environment'.
 [31;01m*[0m