* CPV:  sci-biology/bioperl-network-1.6.0
 * REPO: gentoo
 * USE:  elibc_glibc kernel_linux test userland_GNU x86
>>> Unpacking source...
>>> Unpacking BioPerl-network-1.6.0.tar.bz2 to /var/tmp/portage/sci-biology/bioperl-network-1.6.0/work
>>> Source unpacked in /var/tmp/portage/sci-biology/bioperl-network-1.6.0/work
>>> Preparing source in /var/tmp/portage/sci-biology/bioperl-network-1.6.0/work/BioPerl-network-1.6.0 ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-biology/bioperl-network-1.6.0/work/BioPerl-network-1.6.0 ...
 * Using Module::Build
Checking whether your kit is complete...
Looks good

Checking prerequisites...
Looks good

Creating new 'Build' script for 'BioPerl-network' version '1.006000'
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-biology/bioperl-network-1.6.0/work/BioPerl-network-1.6.0 ...
Copying Bio/Network/IO/psi25.pm -> blib/lib/Bio/Network/IO/psi25.pm
Copying Bio/Network/Edge.pm -> blib/lib/Bio/Network/Edge.pm
Copying Bio/Network/ProteinNet.pm -> blib/lib/Bio/Network/ProteinNet.pm
Copying Bio/Network/IO/psi10.pm -> blib/lib/Bio/Network/IO/psi10.pm
Copying Bio/Network/Node.pm -> blib/lib/Bio/Network/Node.pm
Copying Bio/Network/IO/psi/intact.pm -> blib/lib/Bio/Network/IO/psi/intact.pm
Copying Bio/Network/IO.pm -> blib/lib/Bio/Network/IO.pm
Copying Bio/Network/IO/dip_tab.pm -> blib/lib/Bio/Network/IO/dip_tab.pm
Copying Bio/Network/Interaction.pm -> blib/lib/Bio/Network/Interaction.pm
Manifying blib/lib/Bio/Network/IO/dip_tab.pm -> blib/libdoc/Bio::Network::IO::dip_tab.3pm
Manifying blib/lib/Bio/Network/IO/psi10.pm -> blib/libdoc/Bio::Network::IO::psi10.3pm
Manifying blib/lib/Bio/Network/Edge.pm -> blib/libdoc/Bio::Network::Edge.3pm
Manifying blib/lib/Bio/Network/IO.pm -> blib/libdoc/Bio::Network::IO.3pm
Manifying blib/lib/Bio/Network/ProteinNet.pm -> blib/libdoc/Bio::Network::ProteinNet.3pm
Manifying blib/lib/Bio/Network/IO/psi25.pm -> blib/libdoc/Bio::Network::IO::psi25.3pm
Manifying blib/lib/Bio/Network/IO/psi/intact.pm -> blib/libdoc/Bio::Network::IO::psi::intact.3pm
Manifying blib/lib/Bio/Network/Node.pm -> blib/libdoc/Bio::Network::Node.3pm
Manifying blib/lib/Bio/Network/Interaction.pm -> blib/libdoc/Bio::Network::Interaction.3pm
>>> Source compiled.
t/Edge.t ......... 
1..10
ok 1 - use Bio::Network::ProteinNet;
ok 2 - use Bio::Network::Edge;
ok 3 - use Bio::Network::Node;
ok 4 - use Bio::Seq;
ok 5 - The object isa Bio::Network::Edge
ok 6
ok 7
ok 8 - The object isa Bio::Network::Edge
ok 9
ok 10
ok
t/Graph-MD5.t .... 
1..23
ok 1 - use Graph::Undirected;
ok 2
ok 3
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21
ok 22
ok 23
ok
t/Graph-Seq.t .... 
1..21
ok 1 - use Graph::Undirected;
ok 2 - use Graph::Traversal::DFS;
ok 3 - use Bio::Seq;
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21
ok
t/IO_dip_tab.t ... 
1..19
ok 1 - use Bio::Network::IO;
ok 2 - use Bio::Network::Edge;
ok 3 - use Bio::Network::Node;
ok 4 - use Bio::Seq;
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10 - PIR:A64696
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok
t/IO_psi10.t ..... 
1..22
ok 1 - use Bio::Network::IO;
ok 2 - use Bio::Network::Node;
ok 3
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
Can't locate object method "proteins" via package "Bio::Network::Node=HASH(0xa3d3d44)" (perhaps you forgot to load "Bio::Network::Node=HASH(0xa3d3d44)"?) at t/IO_psi10.t line 63.
# Looks like you planned 22 tests but ran 20.
# Looks like your test exited with 255 just after 20.
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 2/22 subtests 
t/IO_psi25.t ..... 
1..9
ok 1 - use Bio::Network::IO;
ok 2
ok 3
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok
t/Interaction.t .. 
1..23
ok 1 - use Bio::Network::ProteinNet;
ok 2 - use Bio::Network::Interaction;
ok 3 - use Bio::Network::Node;
ok 4 - use Bio::Seq;
ok 5 - use Bio::Annotation::Comment;
ok 6 - use Bio::Annotation::Collection;
ok 7 - use Bio::Annotation::OntologyTerm;
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20 - Comment: Reliable
ok 21
ok 22
ok 23
ok
t/Node.t ......... 
1..32
ok 1 - use Bio::Network::ProteinNet;
ok 2 - use Bio::Network::Node;
ok 3 - use Bio::Seq;
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32
ok
t/ProteinNet.t ... 
1..171
ok 1 - use Bio::Network::ProteinNet;
ok 2 - use Bio::Network::IO;
ok 3
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21 - 0.028
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32
ok 33
ok 34
ok 35
ok 36
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ok 156
ok 157
ok 158
ok 159
ok 160
ok 161
ok 162
ok 163
ok 164
ok 165
ok 166
ok 167
ok 168
ok 169
ok 170 - The object isa Bio::Network::Node
ok 171 - The object isa Bio::Network::Node
ok

Test Summary Report
-------------------
t/IO_psi10.t   (Wstat: 65280 Tests: 20 Failed: 0)
  Non-zero exit status: 255
  Parse errors: Bad plan.  You planned 22 tests but ran 20.
Files=9, Tests=328, 40 wallclock secs ( 0.10 usr  0.03 sys + 38.83 cusr  0.56 csys = 39.52 CPU)
Result: FAIL
Failed 1/9 test programs. 0/328 subtests failed.
 * ERROR: sci-biology/bioperl-network-1.6.0 failed:
 *   test failed
 * 
 * Call stack:
 *     ebuild.sh, line   61:  Called src_test
 *   environment, line 2807:  Called perl-module_src_test
 *   environment, line 2595:  Called die
 * The specific snippet of code:
 *               ./Build test verbose=${TEST_VERBOSE:-0} || die "test failed";
 * 
 * If you need support, post the output of 'emerge --info =sci-biology/bioperl-network-1.6.0',
 * the complete build log and the output of 'emerge -pqv =sci-biology/bioperl-network-1.6.0'.
 * The complete build log is located at '/var/log/portage/build/sci-biology/bioperl-network-1.6.0:20091225-044351.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/bioperl-network-1.6.0/temp/environment'.
 * S: '/var/tmp/portage/sci-biology/bioperl-network-1.6.0/work/BioPerl-network-1.6.0'

>>> Install bioperl-network-1.6.0 into /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/ category sci-biology
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/IO.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/ProteinNet.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/Interaction.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/Node.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/Edge.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/IO/psi25.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/IO/dip_tab.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/IO/psi10.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/lib/perl5/vendor_perl/5.8.8/Bio/Network/IO/psi/intact.pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::IO::psi::intact.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::IO::psi25.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::IO::dip_tab.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::Edge.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::Node.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::IO::psi10.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::IO.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::Interaction.3pm
Installing /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/usr/share/man/man3/Bio::Network::ProteinNet.3pm
>>> Completed installing bioperl-network-1.6.0 into /var/tmp/portage/sci-biology/bioperl-network-1.6.0/image/

 * Removing /usr/share/doc
 * Removing /usr/share/info
Merge of sci-biology/bioperl-network-1.6.0 at 2009-12-25T04:43:51+00:00
failed